BP911804 |
Clone id |
YMU001_000009_D03 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000009_D03. |
Accession |
BP911804 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL245Contig1 |
Sequence |
CCTCGAGTTAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATATTTA ACGCGTTAGCTACATCACTGCACGGGTCGATACGCGCAGCGATTAATATCCATCGTTTAC GGCTAGGACTACTGGGGTATCTAATCCCATTTGCTCCCCTAGCTTTCGTCTCTCAGTGTC AGTGTCGGCCCAGCAGAGTGCCTTCGCCTCTGGTGTTCTTTCCGATATCTACGCATTTCA CCGCTCCACCGGAAATTCCCTCCGCCCCTACCGTACTCTAGCCCAGTAGTTTCCATCGCC TGTCCGGGGTTGAGCCCTGGGATTTGACAGCGGACTTAAGGAGCCACCTACAGACGCTTT ACGCCCAATCATTCCGGATAACGCTTGCATCCCCTGTCTTACCGCGGCTGCTGGCACAGA GTTAGCCGATGCTTATTCCTCAGATACCGTCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PU36 |
Definition |
sp|Q9PU36|PCLO_CHICK Protein piccolo (Fragment) OS=Gallus gallus |
Align length |
73 |
Score (bit) |
35.4 |
E-value |
0.11 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5W7C9 |
Definition |
tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. japonica |
Align length |
127 |
Score (bit) |
216.0 |
E-value |
3.0e-55 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911804|Adiantum capillus-veneris mRNA, clone: YMU001_000009_D03. (453 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. jap... 216 3e-55 tr|A1IW38|A1IW38_9LAMI Putative uncharacterized protein ophh-67 ... 152 8e-36 tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas... 133 5e-30 tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, who... 132 9e-30 tr|B0TIG5|B0TIG5_HELMI Putative uncharacterized protein OS=Helio... 103 3e-21 tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein OS=Strep... 77 5e-21 tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein OS=Strep... 77 5e-21 tr|A7VSA3|A7VSA3_9CLOT Putative uncharacterized protein OS=Clost... 95 2e-18 tr|A8S6E9|A8S6E9_9FIRM Putative uncharacterized protein OS=Faeca... 89 1e-16 tr|A8S7R2|A8S7R2_9FIRM Putative uncharacterized protein OS=Faeca... 87 3e-16 tr|A6P025|A6P025_9BACE Putative uncharacterized protein OS=Bacte... 80 5e-14 tr|B1QRR6|B1QRR6_CLOBO Putative uncharacterized protein (Fragmen... 73 6e-12 tr|A7UXY6|A7UXY6_BACUN Putative uncharacterized protein OS=Bacte... 67 3e-10 tr|A8RZB5|A8RZB5_9CLOT Putative uncharacterized protein OS=Clost... 63 6e-10 tr|A7P418|A7P418_VITVI Chromosome chr1 scaffold_5, whole genome ... 66 8e-10 tr|A7B5X2|A7B5X2_RUMGN Putative uncharacterized protein OS=Rumin... 62 1e-09 tr|A6BKY0|A6BKY0_9FIRM Putative uncharacterized protein OS=Dorea... 62 2e-09 tr|A5ZLI2|A5ZLI2_9BACE Putative uncharacterized protein OS=Bacte... 64 4e-09 tr|B7R8V4|B7R8V4_9THEO Putative uncharacterized protein OS=Carbo... 62 1e-08 tr|B1QFS2|B1QFS2_CLOBO Putative uncharacterized protein (Fragmen... 62 1e-08 tr|A4QMA9|A4QMA9_PINKO ORF40t OS=Pinus koraiensis PE=4 SV=1 58 3e-07 tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum P... 55 2e-06 tr|A5TSU3|A5TSU3_FUSNP Putative uncharacterized protein OS=Fusob... 49 1e-04 tr|Q3BKI4|Q3BKI4_9PROT Putative uncharacterized protein OS=Magne... 48 3e-04 tr|A4QMB0|A4QMB0_PINKO ORF64d OS=Pinus koraiensis PE=4 SV=1 47 5e-04 tr|Q6F1U9|Q6F1U9_MESFL Putative uncharacterized protein OS=Mesop... 37 0.002 tr|B7PQ76|B7PQ76_IXOSC Putative uncharacterized protein (Fragmen... 44 0.003 tr|A8SEV7|A8SEV7_9FIRM Putative uncharacterized protein OS=Faeca... 44 0.004 tr|A9ZLK9|A9ZLK9_COXBU Putative uncharacterized protein (Fragmen... 44 0.005 tr|A7VJ94|A7VJ94_9CLOT Putative uncharacterized protein OS=Clost... 43 0.007
>tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. japonica GN=P0496H07.14 PE=4 SV=1 Length = 265
Score = 216 bits (551), Expect = 3e-55 Identities = 110/127 (86%), Positives = 114/127 (89%) Frame = +3
Query: 42 SPGGIFNALATSLHGSIRAAINIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSPLVFF 221 SPGGI NALAT+LHGS R +IHRLRLGLLG LIPFAPLAFVSQCQCRPSRV SPLVFF Sbjct: 3 SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62
Query: 222 PISTHFTAPPEIPSAPTVL*PSSFHRLSGVEPWDLTADLRSHLQTLYAQSFRITLASPVL 401 PIS HFTAPPEIPSAPTVL SFHRLS VEPWDLTADL+SHLQTLYAQSFRITLAS VL Sbjct: 63 PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122
Query: 402 PRLLAQS 422 PRLLAQ+ Sbjct: 123 PRLLAQN 129
>tr|A1IW38|A1IW38_9LAMI Putative uncharacterized protein ophh-67 (Fragment) OS=Phillyrea latifolia GN=ophh-67 PE=2 SV=1 Length = 84
Score = 152 bits (384), Expect = 8e-36 Identities = 74/80 (92%), Positives = 76/80 (95%) Frame = +3
Query: 39 YSPGGIFNALATSLHGSIRAAINIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSPLVF 218 YSPGGI NALAT+LHGSIR A +IHRLRLGLLGYLIPFAPLAFVSQCQCRPSRV SPLVF Sbjct: 2 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 61
Query: 219 FPISTHFTAPPEIPSAPTVL 278 FPISTHFTAPPEIPSAPTVL Sbjct: 62 FPISTHFTAPPEIPSAPTVL 81
>tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas taitungensis PE=4 SV=1 Length = 75
Score = 133 bits (334), Expect = 5e-30 Identities = 67/73 (91%), Positives = 68/73 (93%) Frame = +3
Query: 204 SPLVFFPISTHFTAPPEIPSAPTVL*PSSFHRLSGVEPWDLTADLRSHLQTLYAQSFRIT 383 SPLVFFPISTHFTAPPEIPSAPTVL SFHRLS VEPWDLTADL+SHLQTLYAQSFRIT Sbjct: 3 SPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 62
Query: 384 LASPVLPRLLAQS 422 LAS VLPRLLAQS Sbjct: 63 LASSVLPRLLAQS 75
>tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001373001 PE=4 SV=1 Length = 237
Score = 132 bits (332), Expect = 9e-30 Identities = 67/75 (89%), Positives = 69/75 (92%) Frame = +3
Query: 198 VPSPLVFFPISTHFTAPPEIPSAPTVL*PSSFHRLSGVEPWDLTADLRSHLQTLYAQSFR 377 V SPLVFFPISTHFTAPPEIPSAPTVL SFHRLS VEPWDLTADL+SHLQTLYAQSFR Sbjct: 36 VLSPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFR 95
Query: 378 ITLASPVLPRLLAQS 422 ITLAS VLPRLLAQ+ Sbjct: 96 ITLASSVLPRLLAQN 110
>tr|B0TIG5|B0TIG5_HELMI Putative uncharacterized protein OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=Helmi_22810 PE=4 SV=1 Length = 113
Score = 103 bits (258), Expect = 3e-21 Identities = 59/113 (52%), Positives = 67/113 (59%) Frame = +3
Query: 30 LRTYSPGGIFNALATSLHGSIRAAINIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSP 209 +R YSPGG+ L +L GSI + HRLR GL GYLI FAP AF Q Q + PSP Sbjct: 1 MRPYSPGGVLIVLTAALEGSIPPTPSTHRLRRGLPGYLILFAPHAFAPQRQVMSRQSPSP 60
Query: 210 LVFFPISTHFTAPPEIPSAPTVL*PSSFHRLSGVEPWDLTADLRSHLQTLYAQ 368 L F PISTHFTA P IP + L SSF GVE T+DL+ L LYAQ Sbjct: 61 LGFLPISTHFTATPGIPLSSPSLKTSSFQGRPGVELRSFTSDLKVRLHALYAQ 113
>tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein OS=Streptococcus suis (strain 98HAH33) GN=SSU98_0020 PE=4 SV=1 Length = 186
Score = 77.4 bits (189), Expect(2) = 5e-21 Identities = 45/88 (51%), Positives = 53/88 (60%) Frame = +3
Query: 30 LRTYSPGGIFNALATSLHGSIRAAINIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSP 209 +R+YSPGG+ NALA +L + HRLR GL GYLI FAP AF Q Q + SP Sbjct: 1 MRSYSPGGVLNALAAALSPGKDPTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSP 60
Query: 210 LVFFPISTHFTAPPEIPSAPTVL*PSSF 293 VF ISTHFTA IP +P+ L SF Sbjct: 61 PVFLHISTHFTATHGIPLSPSALKFDSF 88
Score = 47.0 bits (110), Expect(2) = 5e-21 Identities = 21/32 (65%), Positives = 22/32 (68%) Frame = +1
Query: 355 RFTPNHSG*RLHPLSYRGCWHRVSRCLFLRYR 450 RFTPN SG R P YRGCWH VSR +RYR Sbjct: 109 RFTPNKSGQRSGPTYYRGCWHVVSRPFLVRYR 140
>tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein OS=Streptococcus suis 89/1591 GN=SsuiDRAFT_1635 PE=4 SV=1 Length = 186
Score = 77.4 bits (189), Expect(2) = 5e-21 Identities = 45/88 (51%), Positives = 53/88 (60%) Frame = +3
Query: 30 LRTYSPGGIFNALATSLHGSIRAAINIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSP 209 +R+YSPGG+ NALA +L + HRLR GL GYLI FAP AF Q Q + SP Sbjct: 1 MRSYSPGGVLNALAAALSPGKDPTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSP 60
Query: 210 LVFFPISTHFTAPPEIPSAPTVL*PSSF 293 VF ISTHFTA IP +P+ L SF Sbjct: 61 PVFLHISTHFTATHGIPLSPSALKFDSF 88
Score = 47.0 bits (110), Expect(2) = 5e-21 Identities = 21/32 (65%), Positives = 22/32 (68%) Frame = +1
Query: 355 RFTPNHSG*RLHPLSYRGCWHRVSRCLFLRYR 450 RFTPN SG R P YRGCWH VSR +RYR Sbjct: 109 RFTPNKSGQRSGPTYYRGCWHVVSRPFLVRYR 140
>tr|A7VSA3|A7VSA3_9CLOT Putative uncharacterized protein OS=Clostridium leptum DSM 753 GN=CLOLEP_01442 PE=4 SV=1 Length = 117
Score = 94.7 bits (234), Expect = 2e-18 Identities = 53/86 (61%), Positives = 56/86 (65%) Frame = +3
Query: 111 HRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSPLVFFPISTHFTAPPEIPSAPTVL*PSS 290 HRLR GL GYLI FA AFV Q Q +PSR PSPLVF PISTHFTA P IP T L S Sbjct: 32 HRLRHGLPGYLILFATHAFVLQRQLKPSRPPSPLVFLPISTHFTATPGIPPTSTSLKQDS 91
Query: 291 FHRLSGVEPWDLTADLRSHLQTLYAQ 368 F R V+P D T DL L+TLY Q Sbjct: 92 FKRSLWVKPIDFTPDLPRRLRTLYTQ 117
>tr|A8S6E9|A8S6E9_9FIRM Putative uncharacterized protein OS=Faecalibacterium prausnitzii M21/2 GN=FAEPRAM212_00169 PE=4 SV=1 Length = 117
Score = 89.0 bits (219), Expect = 1e-16 Identities = 49/86 (56%), Positives = 55/86 (63%) Frame = +3
Query: 111 HRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSPLVFFPISTHFTAPPEIPSAPTVL*PSS 290 HRLR GL GYLI FA F Q Q PSR PSPLVF PISTH TA P IP +L +S Sbjct: 32 HRLRCGLPGYLILFATHTFEPQRQLVPSRPPSPLVFLPISTHSTATPGIPPTSALLKKNS 91
Query: 291 FHRLSGVEPWDLTADLRSHLQTLYAQ 368 F S VEP D T++L S L++LY Q Sbjct: 92 FESSSWVEPMDFTSNLSSRLRSLYTQ 117
>tr|A8S7R2|A8S7R2_9FIRM Putative uncharacterized protein OS=Faecalibacterium prausnitzii M21/2 GN=FAEPRAM212_00542 PE=4 SV=1 Length = 117
Score = 87.4 bits (215), Expect = 3e-16 Identities = 48/86 (55%), Positives = 55/86 (63%) Frame = +3
Query: 111 HRLRLGLLGYLIPFAPLAFVSQCQCRPSRVPSPLVFFPISTHFTAPPEIPSAPTVL*PSS 290 HRL+ GL GYLI FA F Q Q PSR PSPLVF PISTH TA P IP +L +S Sbjct: 32 HRLQCGLPGYLILFATHTFEPQRQLVPSRPPSPLVFLPISTHSTATPGIPPTSALLKKNS 91
Query: 291 FHRLSGVEPWDLTADLRSHLQTLYAQ 368 F S VEP D T++L S L++LY Q Sbjct: 92 FESSSWVEPMDFTSNLSSRLRSLYTQ 117
|