BP911810 |
Clone id |
YMU001_000009_D10 |
Library |
YMU01 |
Length |
600 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000009_D10. |
Accession |
BP911810 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATCAAGCCCTTTCCAACAAGTTCGCGCCGACTTCAATACCTGACAGGCATCGAATTTTC AGAGGGCATATCCCTGCCTTGTTGCAGTCACGAAGTCTTTGATGAAGCAATTCCCCAAGC CCCACTCAAGGCTGCCAATCCAACAAACAATACTCTAGATGTTGGCAACCCAACAAATCT TACTCCAATCCCTGTTGTAGCCTTTCTTGGTACAAAACCACTCCCTTTATGTAGCTCCTC TATCAATGATCTCAAGTGGTTTCACATTCCGTGAATCCACATGGTCAGCCCTTGAATGGT GGAGACGACAATGCAGAGAGGCCTTCCCCCAATTTACTTGAAGTAATCAGCAGTGTAGCT CACCCTTACAGCTTGGATTTTCTTGCTTGTTATGCAGCAATCATAGTTCATCAAGGCAAC CCCACCTCATGCCAATCTATTAGAATCCATCTCGGAGAAGATGGTGAACCCTCAACTAGC AGCTCCAAAGTGTTTTGTATTCGTACCATCCTTCCTGCTGCTGCTCTTGACAACCAAGAT CCTGCTCTTTTGCGCCCGGAATCGAATCTCCTTCTGTCCTTGGAGCTCACCCCTTTTGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O95671 |
Definition |
sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like protein OS=Homo sapiens |
Align length |
46 |
Score (bit) |
31.6 |
E-value |
3.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1ZDW6 |
Definition |
tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) |
Align length |
49 |
Score (bit) |
35.4 |
E-value |
2.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911810|Adiantum capillus-veneris mRNA, clone: YMU001_000009_D10. (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5 tr|B1Z9A8|B1Z9A8_METPB dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5 tr|A9W5D2|A9W5D2_METEP dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5 tr|B7KNS1|B7KNS1_METCH dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5 tr|A7T5Q5|A7T5Q5_NEMVE Predicted protein OS=Nematostella vectens... 35 2.5 tr|P96450|P96450_RHIME dTDP-glucose 4,6-dehydratase OS=Rhizobium... 35 4.3 tr|Q09BC9|Q09BC9_STIAU Oxidoreductase, short-chain dehydrogenase... 33 9.8
>tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_4253 PE=4 SV=1 Length = 352
Score = 35.4 bits (80), Expect = 2.5 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2
Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268 P+ N +NN P L P+ ++A L KPLP+ +N+ W H+ Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227
>tr|B1Z9A8|B1Z9A8_METPB dTDP-glucose 4,6-dehydratase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_2352 PE=4 SV=1 Length = 352
Score = 35.4 bits (80), Expect = 2.5 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2
Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268 P+ N +NN P L P+ ++A L KPLP+ +N+ W H+ Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227
>tr|A9W5D2|A9W5D2_METEP dTDP-glucose 4,6-dehydratase OS=Methylobacterium extorquens (strain PA1) GN=Mext_2393 PE=4 SV=1 Length = 352
Score = 35.4 bits (80), Expect = 2.5 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2
Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268 P+ N +NN P L P+ ++A L KPLP+ +N+ W H+ Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227
>tr|B7KNS1|B7KNS1_METCH dTDP-glucose 4,6-dehydratase OS=Methylobacterium chloromethanicum CM4 GN=Mchl_2670 PE=4 SV=1 Length = 352
Score = 35.4 bits (80), Expect = 2.5 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2
Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268 P+ N +NN P L P+ ++A L KPLP+ +N+ W H+ Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227
>tr|A7T5Q5|A7T5Q5_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g222687 PE=4 SV=1 Length = 332
Score = 35.4 bits (80), Expect = 2.5 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 15/69 (21%) Frame = +2
Query: 98 FDEAIPQAPLKAANPTNNTLDVGNPT--------------NLTPIPVVAFLGTKPLPLCS 235 + E IPQAP +A + T + G P+ N P+PV A + LP CS Sbjct: 208 YSEKIPQAPQQAIESSRPTQNTGTPSRLDQNPDSLNPKYYNAAPLPVTAV--RQELPACS 265
Query: 236 SSIN-DLKW 259 S+IN + +W Sbjct: 266 SAINREAEW 274
>tr|P96450|P96450_RHIME dTDP-glucose 4,6-dehydratase OS=Rhizobium meliloti GN=wgaI PE=3 SV=1 Length = 356
Score = 34.7 bits (78), Expect = 4.3 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2
Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268 P+ +N +NN P L P+ ++ + KPLPL S N W H+ Sbjct: 180 PVVVSNCSNNYGPFHFPEKLIPLTIINAIEEKPLPLYGSGANVRDWLHV 228
>tr|Q09BC9|Q09BC9_STIAU Oxidoreductase, short-chain dehydrogenase/reductase family OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_8621 PE=4 SV=1 Length = 205
Score = 33.5 bits (75), Expect = 9.8 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Frame = -1
Query: 564 RFRAQKSRILVVKSSSRKD-GTNTKH-FGAAS*GFTIFSEMDSNRLA*GGVALM 409 RF AQKS LVV SS D G + + +GA+ T+F + NRLA GVA++ Sbjct: 84 RFEAQKSGTLVVISSVAGDRGRQSNYVYGASKGALTVFLQGLRNRLAPSGVAVV 137
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