BP911810
Clone id YMU001_000009_D10
Library
Length 600
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATCAAGCCCTTTCCAACAAGTTCGCGCCGACTTCAATACCTGACAGGCATCGAATTTTC
AGAGGGCATATCCCTGCCTTGTTGCAGTCACGAAGTCTTTGATGAAGCAATTCCCCAAGC
CCCACTCAAGGCTGCCAATCCAACAAACAATACTCTAGATGTTGGCAACCCAACAAATCT
TACTCCAATCCCTGTTGTAGCCTTTCTTGGTACAAAACCACTCCCTTTATGTAGCTCCTC
TATCAATGATCTCAAGTGGTTTCACATTCCGTGAATCCACATGGTCAGCCCTTGAATGGT
GGAGACGACAATGCAGAGAGGCCTTCCCCCAATTTACTTGAAGTAATCAGCAGTGTAGCT
CACCCTTACAGCTTGGATTTTCTTGCTTGTTATGCAGCAATCATAGTTCATCAAGGCAAC
CCCACCTCATGCCAATCTATTAGAATCCATCTCGGAGAAGATGGTGAACCCTCAACTAGC
AGCTCCAAAGTGTTTTGTATTCGTACCATCCTTCCTGCTGCTGCTCTTGACAACCAAGAT
CCTGCTCTTTTGCGCCCGGAATCGAATCTCCTTCTGTCCTTGGAGCTCACCCCTTTTGAC
■■Homology search results ■■ -
sp_hit_id O95671
Definition sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like protein OS=Homo sapiens
Align length 46
Score (bit) 31.6
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911810|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_D10.
(600 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like ... 32 3.2
sp|A6V7Y9|ALLC_PSEA7 Probable allantoicase OS=Pseudomonas aerugi... 31 4.2
sp|Q492G6|SYE_BLOPB Glutamyl-tRNA synthetase OS=Blochmannia penn... 30 9.3
sp|O33479|ICEV_PSESX Ice nucleation protein OS=Pseudomonas syrin... 30 9.3

>sp|O95671|ASML_HUMAN N-acetylserotonin O-methyltransferase-like
protein OS=Homo sapiens GN=ASMTL PE=1 SV=3
Length = 621

Score = 31.6 bits (70), Expect = 3.2
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2

Query: 2 IKPFPTSSRRLQYLTGIEFSEGISLPCCSHEVFDEAIPQAPLKAAN 139
+ PFPT R L+ + G S+G+ L C +VFD +AP KAA+
Sbjct: 281 LPPFPT--RLLELIEGFMLSKGL-LTACKLKVFDLLKDEAPQKAAD 323


>sp|A6V7Y9|ALLC_PSEA7 Probable allantoicase OS=Pseudomonas
aeruginosa (strain PA7) GN=alc PE=3 SV=1
Length = 332

Score = 31.2 bits (69), Expect = 4.2
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +1

Query: 283 GQPLNGGD--DNAERPSPNLLEVISSVAHPYSLDFLACYAAIIVHQGN-PTSCQSIRIHL 453
G+ LN GD + R +P I ++ HP S++ A + +GN P SC SI+
Sbjct: 208 GRALNMGDGWETGRRRTPGHDWAIIALGHPGSIE--AAVVDTLHFKGNYPESC-SIQAAF 264

Query: 454 GEDGEPSTSSSKVFCIRTILPAAALD 531
EDG + ++ R +LPA L+
Sbjct: 265 VEDGNEARIEAQSLFWRELLPAQKLE 290


>sp|Q492G6|SYE_BLOPB Glutamyl-tRNA synthetase OS=Blochmannia
pennsylvanicus (strain BPEN) GN=gltX PE=3 SV=1
Length = 468

Score = 30.0 bits (66), Expect = 9.3
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2

Query: 554 RKRAGSWLSRAAAGRMVR-IQNTLELLVEGSPSSPRWILIDWHE 426
RK+ G +L R + R I +T+EL+V G RW+ +DW E
Sbjct: 31 RKQGGKFLLRIEDSDLQRSIDDTVELIVAGM----RWLSLDWDE 70


>sp|O33479|ICEV_PSESX Ice nucleation protein OS=Pseudomonas syringae
GN=inaV PE=3 SV=1
Length = 1196

Score = 30.0 bits (66), Expect = 9.3
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2

Query: 86 SHEVFDEAIPQAPLKAANPTNNTLDVGNPTNL 181
SHEVFD A+ + AA P+ NTL V P NL
Sbjct: 142 SHEVFDVAL----VSAAAPSVNTLPVTTPQNL 169


tr_hit_id B1ZDW6
Definition tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
Align length 49
Score (bit) 35.4
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911810|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_D10.
(600 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5
tr|B1Z9A8|B1Z9A8_METPB dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5
tr|A9W5D2|A9W5D2_METEP dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5
tr|B7KNS1|B7KNS1_METCH dTDP-glucose 4,6-dehydratase OS=Methyloba... 35 2.5
tr|A7T5Q5|A7T5Q5_NEMVE Predicted protein OS=Nematostella vectens... 35 2.5
tr|P96450|P96450_RHIME dTDP-glucose 4,6-dehydratase OS=Rhizobium... 35 4.3
tr|Q09BC9|Q09BC9_STIAU Oxidoreductase, short-chain dehydrogenase... 33 9.8

>tr|B1ZDW6|B1ZDW6_METPB dTDP-glucose 4,6-dehydratase
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
13946 / BJ001) GN=Mpop_4253 PE=4 SV=1
Length = 352

Score = 35.4 bits (80), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2

Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268
P+ N +NN P L P+ ++A L KPLP+ +N+ W H+
Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227


>tr|B1Z9A8|B1Z9A8_METPB dTDP-glucose 4,6-dehydratase
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
13946 / BJ001) GN=Mpop_2352 PE=4 SV=1
Length = 352

Score = 35.4 bits (80), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2

Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268
P+ N +NN P L P+ ++A L KPLP+ +N+ W H+
Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227


>tr|A9W5D2|A9W5D2_METEP dTDP-glucose 4,6-dehydratase
OS=Methylobacterium extorquens (strain PA1) GN=Mext_2393
PE=4 SV=1
Length = 352

Score = 35.4 bits (80), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2

Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268
P+ N +NN P L P+ ++A L KPLP+ +N+ W H+
Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227


>tr|B7KNS1|B7KNS1_METCH dTDP-glucose 4,6-dehydratase
OS=Methylobacterium chloromethanicum CM4 GN=Mchl_2670
PE=4 SV=1
Length = 352

Score = 35.4 bits (80), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2

Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268
P+ N +NN P L P+ ++A L KPLP+ +N+ W H+
Sbjct: 179 PVLVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHV 227


>tr|A7T5Q5|A7T5Q5_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g222687 PE=4 SV=1
Length = 332

Score = 35.4 bits (80), Expect = 2.5
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Frame = +2

Query: 98 FDEAIPQAPLKAANPTNNTLDVGNPT--------------NLTPIPVVAFLGTKPLPLCS 235
+ E IPQAP +A + T + G P+ N P+PV A + LP CS
Sbjct: 208 YSEKIPQAPQQAIESSRPTQNTGTPSRLDQNPDSLNPKYYNAAPLPVTAV--RQELPACS 265

Query: 236 SSIN-DLKW 259
S+IN + +W
Sbjct: 266 SAINREAEW 274


>tr|P96450|P96450_RHIME dTDP-glucose 4,6-dehydratase OS=Rhizobium
meliloti GN=wgaI PE=3 SV=1
Length = 356

Score = 34.7 bits (78), Expect = 4.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2

Query: 122 PLKAANPTNNTLDVGNPTNLTPIPVVAFLGTKPLPLCSSSINDLKWFHI 268
P+ +N +NN P L P+ ++ + KPLPL S N W H+
Sbjct: 180 PVVVSNCSNNYGPFHFPEKLIPLTIINAIEEKPLPLYGSGANVRDWLHV 228


>tr|Q09BC9|Q09BC9_STIAU Oxidoreductase, short-chain
dehydrogenase/reductase family OS=Stigmatella aurantiaca
DW4/3-1 GN=STIAU_8621 PE=4 SV=1
Length = 205

Score = 33.5 bits (75), Expect = 9.8
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -1

Query: 564 RFRAQKSRILVVKSSSRKD-GTNTKH-FGAAS*GFTIFSEMDSNRLA*GGVALM 409
RF AQKS LVV SS D G + + +GA+ T+F + NRLA GVA++
Sbjct: 84 RFEAQKSGTLVVISSVAGDRGRQSNYVYGASKGALTVFLQGLRNRLAPSGVAVV 137