BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911815|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_E04.
         (529 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05028|PDGFB_RAT Platelet-derived growth factor subunit B (Fr...    30   7.1  
sp|P31240|PDGFB_MOUSE Platelet-derived growth factor subunit B O...    30   7.1  
sp|Q8VEA6|CRDL2_MOUSE Chordin-like protein 2 OS=Mus musculus GN=...    30   9.4  

>sp|Q05028|PDGFB_RAT Platelet-derived growth factor subunit B
           (Fragment) OS=Rattus norvegicus GN=Pdgfb PE=2 SV=1
          Length = 225

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 174 LPLCCYLHRHHSKTASIPEELR*SISLKSV-AYPDMTRKL 290
           LPLCCYL    ++   IPEEL   +S  S+ ++ D+ R L
Sbjct: 1   LPLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLL 40


>sp|P31240|PDGFB_MOUSE Platelet-derived growth factor subunit B
           OS=Mus musculus GN=Pdgfb PE=2 SV=1
          Length = 241

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 174 LPLCCYLHRHHSKTASIPEELR*SISLKSV-AYPDMTRKL 290
           LPLCCYL    ++   IPEEL   +S  S+ ++ D+ R L
Sbjct: 9   LPLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLL 48


>sp|Q8VEA6|CRDL2_MOUSE Chordin-like protein 2 OS=Mus musculus
           GN=Chrdl2 PE=1 SV=1
          Length = 426

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +1

Query: 298 LNAPIRCCHVSINRT*SASLAPINKPNLPGVRHFYRCT---CSMRRWPTAPLPQSTCLSL 468
           L  P  CC    +RT  +S     + NL  ++H  R +   CS RR P+ P P S    L
Sbjct: 164 LPLPDSCCQTCKDRTTESS----TEENLTQLQHGERHSQDPCSERRGPSTPAPTSLSSPL 219

Query: 469 WVLEPAHLQT 498
             + P H Q+
Sbjct: 220 GFI-PRHFQS 228

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911815|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_E04.
         (529 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******