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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911821
Clone id YMU001_000009_E11
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCATGATGCAGGGACGCTTGTGGCTTGACTCTTATCTCTGAGCATTCTGCATCTACATGC
TTGAACCATCTATTTGCAGGACACAAGGACTCTAATAGACATATAATTCTTTACTTCAAC
CTCTGCACTAATTAATGTGTAATGCACCACAATTAGCTATGTAGAACACAAATTACAAAG
AAAAAGACACAACAGCATGATCTACTCTGTAAATGGTGTGAGCCAGCAATTCGATGCCGA
TCTAACGCTCGGATTTGCCCCACAGGAAGACCCCCACCGCATACTGTCGCTTCTCGCGAA
GAGTTCCAAGAACGGGCAAGCCATACTCCTCGAGGAGGCGGTCGAGCTTCCACTCTGGCA
TGCTGTCATAGTCGTCCTTGGTGTATTAGGGGTAATGTAGGGGCATTTGGAATGTAGTGG
GCACATCAGGCTTC
■■Homology search results ■■ -
sp_hit_id Q6UXX9
Definition sp|Q6UXX9|RSPO2_HUMAN R-spondin-2 OS=Homo sapiens
Align length 51
Score (bit) 30.0
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911821|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_E11.
         (434 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6UXX9|RSPO2_HUMAN R-spondin-2 OS=Homo sapiens GN=RSPO2 PE=2 ...    30   4.3  
sp|A6TC10|MNMC_KLEP7 tRNA 5-methylaminomethyl-2-thiouridine bios...    30   5.6  
sp|Q69Z28|ATS16_MOUSE A disintegrin and metalloproteinase with t...    30   5.6  
sp|Q4ZXA2|AMIF_PSEU2 Formamidase OS=Pseudomonas syringae pv. syr...    29   7.3  
sp|Q887D9|AMIF_PSESM Formamidase OS=Pseudomonas syringae pv. tom...    29   7.3  
sp|P34340|COL90_CAEEL Putative cuticle collagen 90 OS=Caenorhabd...    29   9.6  
sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Ar...    29   9.6  
sp|Q8TE57|ATS16_HUMAN A disintegrin and metalloproteinase with t...    29   9.6  

>sp|Q6UXX9|RSPO2_HUMAN R-spondin-2 OS=Homo sapiens GN=RSPO2 PE=2
           SV=2
          Length = 243

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 163 RTQITKKKTQQHDLLCKWCEPAIRCRSNARICPTGRPPPHTVASREEFQER 315
           RT+   KK  +  +LC     + RC+   R CP G+  P     R + ++R
Sbjct: 172 RTRQIVKKPVKDTILCPTIAESRRCKMTMRHCPGGKRTPKAKEKRNKKKKR 222


>sp|A6TC10|MNMC_KLEP7 tRNA 5-methylaminomethyl-2-thiouridine
           biosynthesis bifunctional protein mnmC OS=Klebsiella
           pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
           78578) GN=mnmC PE=3 SV=1
          Length = 662

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 338 PPRGVWLARSWNSSREATVCGGGL 267
           P R  W ARS + +REA + GGG+
Sbjct: 251 PARVPWFARSSSDAREAAIIGGGI 274


>sp|Q69Z28|ATS16_MOUSE A disintegrin and metalloproteinase with
            thrombospondin motifs 16 OS=Mus musculus GN=Adamts16 PE=2
            SV=2
          Length = 1222

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 365  QHARVEARPPPRGVWLARSWNSSREATVCGGGLPVGQIRALDRHRIAGSHHLQSR 201
            +H   +A   PRG W A  W  S+    CGGG+    ++ L R + A    L  +
Sbjct: 1114 KHPPFDASGSPRGSWFASPW--SQCTASCGGGVQRRTVQCLLRGQPASDCFLHEK 1166


>sp|Q4ZXA2|AMIF_PSEU2 Formamidase OS=Pseudomonas syringae pv.
           syringae (strain B728a) GN=amiF PE=3 SV=1
          Length = 338

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 9/35 (25%)
 Frame = +1

Query: 334 GGGRASTLACCHSRP---------WCIRGNVGAFG 411
           GGGRA  + CC  RP         W +  N+  FG
Sbjct: 243 GGGRADEIVCCELRPDLVREARVHWGVENNIYQFG 277


>sp|Q887D9|AMIF_PSESM Formamidase OS=Pseudomonas syringae pv. tomato
           GN=amiF PE=3 SV=1
          Length = 338

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 9/35 (25%)
 Frame = +1

Query: 334 GGGRASTLACCHSRP---------WCIRGNVGAFG 411
           GGGRA  + CC  RP         W +  N+  FG
Sbjct: 243 GGGRADEIVCCELRPDLVREARVHWGVENNIYQFG 277


>sp|P34340|COL90_CAEEL Putative cuticle collagen 90
           OS=Caenorhabditis elegans GN=col-90 PE=2 SV=1
          Length = 305

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +1

Query: 235 CRSNARICPTGRPPPHTVASREEFQERASHTPRGGGRASTLACCHSRP-WCIRGNVGAFG 411
           C SN++ CP G P P  +  +   +       R G    +LA  H  P  CI    G  G
Sbjct: 86  CDSNSQGCPAGPPGPPGLPGKRGDEGVVGDLGRSGASGISLAAVHHIPGGCINCPAGPAG 145


>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16
           OS=Arabidopsis thaliana GN=COL16 PE=2 SV=2
          Length = 417

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 211 KWCEPAIRCRSNARICPTGRPPPHTVASREEFQERASHTPRGGGRASTLACCH 369
           K   PA+   SN     +   PPH VA+      R + TPRG G+ +  +  H
Sbjct: 60  KTASPAVVKHSNH----SSASPPHEVATWHHGFTRKARTPRGSGKKNNSSIFH 108


>sp|Q8TE57|ATS16_HUMAN A disintegrin and metalloproteinase with
            thrombospondin motifs 16 OS=Homo sapiens GN=ADAMTS16 PE=1
            SV=2
          Length = 1224

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -1

Query: 365  QHARVEARPPPRGVWLARSWNSSREATVCGGGLPVGQIRAL 243
            +H    A  P RG W A  W  S+    CGGG+    ++ L
Sbjct: 1116 RHPPFAAAGPSRGSWFASPW--SQCTASCGGGVQTRSVQCL 1154
tr_hit_id B6SYT2
Definition tr|B6SYT2|B6SYT2_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 52
Score (bit) 88.6
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911821|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_E11.
         (434 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6SYT2|B6SYT2_MAIZE Putative uncharacterized protein OS=Zea m...    89   1e-16
tr|Q9LE65|Q9LE65_ORYSJ Putative uncharacterized protein P0483F08...    88   2e-16
tr|Q1G3G9|Q1G3G9_ARATH Putative uncharacterized protein OS=Arabi...    88   2e-16
tr|A2WM66|A2WM66_ORYSI Putative uncharacterized protein OS=Oryza...    88   2e-16
tr|A0MDU7|A0MDU7_ARATH Putative uncharacterized protein (Fragmen...    88   2e-16
tr|A7QNB4|A7QNB4_VITVI Chromosome chr2 scaffold_132, whole genom...    83   8e-15
tr|A7PZS1|A7PZS1_VITVI Chromosome chr15 scaffold_40, whole genom...    82   1e-14
tr|B6T5I5|B6T5I5_MAIZE Putative uncharacterized protein OS=Zea m...    82   1e-14
tr|A9PIZ8|A9PIZ8_POPJC Putative uncharacterized protein OS=Popul...    81   3e-14
tr|Q654E0|Q654E0_ORYSJ Putative uncharacterized protein OSJNBa00...    80   4e-14
tr|Q0DBV7|Q0DBV7_ORYSJ Os06g0523300 protein OS=Oryza sativa subs...    80   4e-14
tr|B6SXC4|B6SXC4_MAIZE Putative uncharacterized protein OS=Zea m...    80   4e-14
tr|A7R2A3|A7R2A3_VITVI Chromosome undetermined scaffold_410, who...    80   4e-14
tr|A2YDK2|A2YDK2_ORYSI Putative uncharacterized protein OS=Oryza...    80   4e-14
tr|Q9M2S2|Q9M2S2_ARATH Putative uncharacterized protein T22E16.2...    79   9e-14
tr|B8AFA1|B8AFA1_ORYSI Putative uncharacterized protein OS=Oryza...    77   4e-13
tr|Q6K249|Q6K249_ORYSJ Os02g0258800 protein OS=Oryza sativa subs...    77   6e-13
tr|B6UC11|B6UC11_MAIZE Putative uncharacterized protein OS=Zea m...    76   7e-13
tr|B6TG82|B6TG82_MAIZE Putative uncharacterized protein OS=Zea m...    76   7e-13
tr|B4FUG1|B4FUG1_MAIZE Putative uncharacterized protein OS=Zea m...    76   7e-13
tr|A7PIP0|A7PIP0_VITVI Chromosome chr13 scaffold_17, whole genom...    75   2e-12
tr|B6T827|B6T827_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|B6T4F8|B6T4F8_MAIZE Putative uncharacterized protein OS=Zea m...    74   5e-12
tr|Q9SR60|Q9SR60_ARATH Putative uncharacterized protein T22K18.2...    70   5e-11
tr|Q8GY86|Q8GY86_ARATH Putative uncharacterized protein At5g5562...    69   1e-10
tr|Q58FW2|Q58FW2_ARATH Putative uncharacterized protein OS=Arabi...    68   2e-10
tr|Q9FM76|Q9FM76_ARATH Gb|AAF04428.1 OS=Arabidopsis thaliana PE=...    66   1e-09
tr|Q8LC55|Q8LC55_ARATH Putative uncharacterized protein (At5g556...    66   1e-09
tr|A5B4B1|A5B4B1_VITVI Putative uncharacterized protein OS=Vitis...    57   6e-07
tr|Q9FI85|Q9FI85_ARATH Gb|AAF04428.1 (Putative uncharacterized p...    51   3e-05

>tr|B6SYT2|B6SYT2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 87

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLWG 257
           FQMPLHYP ++++DY++MPEW+LDRLL EYGLPV GT+ +KR +A+G FLWG
Sbjct: 30  FQMPLHYPRHSREDYEAMPEWQLDRLLSEYGLPVAGTVHQKRTFAIGTFLWG 81


>tr|Q9LE65|Q9LE65_ORYSJ Putative uncharacterized protein P0483F08.38
           (Putative uncharacterized protein) (Putative
           uncharacterized protein P0443E05.1) OS=Oryza sativa
           subsp. japonica GN=P0483F08.38 PE=4 SV=1
          Length = 79

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLWG 257
           FQMPLHYP Y K+DY+ MPEW+LDRLL EYGLPV G L+ KR +A+G FLWG
Sbjct: 20  FQMPLHYPRYRKEDYERMPEWQLDRLLSEYGLPVDGNLQHKRAFAIGAFLWG 71


>tr|Q1G3G9|Q1G3G9_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 101

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = -2

Query: 418 TTFQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           ++FQ+PLHYP YTK DY+ MPEW+LDRLL EYGLPV+G   EKR++A+G FLW
Sbjct: 43  SSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLW 95


>tr|A2WM66|A2WM66_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00937 PE=4 SV=1
          Length = 79

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLWG 257
           FQMPLHYP Y K+DY+ MPEW+LDRLL EYGLPV G L+ KR +A+G FLWG
Sbjct: 20  FQMPLHYPRYRKEDYERMPEWQLDRLLSEYGLPVDGNLQHKRAFAIGAFLWG 71


>tr|A0MDU7|A0MDU7_ARATH Putative uncharacterized protein (Fragment)
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 102

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 36/53 (67%), Positives = 45/53 (84%)
 Frame = -2

Query: 418 TTFQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           ++FQ+PLHYP YTK DY+ MPEW+LDRLL EYGLPV+G   EKR++A+G FLW
Sbjct: 43  SSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLW 95


>tr|A7QNB4|A7QNB4_VITVI Chromosome chr2 scaffold_132, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00002465001
           PE=4 SV=1
          Length = 91

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           FQMPLHYP Y K DY++MPEWKLD LL +YGLPV G L +KR++A+G FLW
Sbjct: 36  FQMPLHYPRYRKTDYETMPEWKLDCLLTQYGLPVTGDLTQKRKFAMGAFLW 86


>tr|A7PZS1|A7PZS1_VITVI Chromosome chr15 scaffold_40, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026984001
           PE=4 SV=1
          Length = 80

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           FQMPLHYP YT+ DY++MPEWK+D LL EYGLPV G + +KR++A+G FLW
Sbjct: 28  FQMPLHYPRYTQADYETMPEWKIDCLLAEYGLPVTGGVEQKRKFAMGAFLW 78


>tr|B6T5I5|B6T5I5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 99

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 34/53 (64%), Positives = 44/53 (83%)
 Frame = -2

Query: 418 TTFQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           ++F+MPLHYP Y K DY++MPEW++D LL EYGLPV G LR KR++A+G FLW
Sbjct: 43  SSFRMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVAGDLRGKREFAMGAFLW 95


>tr|A9PIZ8|A9PIZ8_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=4 SV=1
          Length = 92

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           FQMPLHYP Y K DY++MPEW+LD LL+EYGLP +G   +KR++A+G FLW
Sbjct: 37  FQMPLHYPRYKKCDYETMPEWRLDCLLKEYGLPAIGDANQKRKFAMGAFLW 87


>tr|Q654E0|Q654E0_ORYSJ Putative uncharacterized protein
           OSJNBa0009J19.26 OS=Oryza sativa subsp. japonica
           GN=OSJNBa0009J19.26 PE=4 SV=1
          Length = 82

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 34/51 (66%), Positives = 42/51 (82%)
 Frame = -2

Query: 412 FQMPLHYP*YTKDDYDSMPEWKLDRLLEEYGLPVLGTLREKRQYAVGVFLW 260
           FQMPLHYP Y K DY++MPEW++D LL EYGLPV G + EKR++A+G FLW
Sbjct: 28  FQMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVDGGVEEKRRFAMGAFLW 78