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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911824
Clone id YMU001_000009_F02
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATTGAAGAAAGTGCATTAAATCATATATCAATAGGACTAAAGGGCAGCACCAAATACAT
GCATTGATGGCAGACTAAAATAATGGATTGCTATCCACCATCAATAACTGGGCAGGCTCT
TACAACCTCATTACCCAAAACATGTGAAACTACACCAAGTCAATATTACAAGAGCACCTT
CTTCCATCTACTCCCATGTGATAACTTAAGCCCAAAACCTATATATTAATACAGGACCCT
TGGAGCCACAATTTATTTACGAGCAGATAGGAGCTCACAGATGCAATGCCCCCCTCTATC
TGCCACCAATCTCCCCAATTACTTCCGCAGTGGGACACCTAAAATGCAGGTCGCAAAAAA
GTTCGATGACGAGCCCAGCCCACAGCTGTCGCGTCACTCATTAAGCAAAAGCAAGAAGCC
TGTATCCTTCAACGATACCTCGGGTAACGAACTACACACAAGCATCATCTCCTGGCACTC
TGTCCTTGCCAAAGCCAATTCTGTTTTACCCCTCGGGTCAATGATAGGATTCCATCATCA
TCAATCTCAAGCTAATCCAGTACATTTTCTCGTATCATTCCCTTAGTTCTTTCTCCC
■■Homology search results ■■ -
sp_hit_id Q04749
Definition sp|Q04749|AVO2_YEAST Target of rapamycin complex 2 subunit AVO2 OS=Saccharomyces cerevisiae
Align length 76
Score (bit) 35.4
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911824|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_F02.
         (597 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04749|AVO2_YEAST Target of rapamycin complex 2 subunit AVO2 ...    35   0.22 
sp|Q9CNA2|Y531_PASMU Uncharacterized protein PM0531 OS=Pasteurel...    34   0.64 
sp|O14132|PIT1_SCHPO Sporulation protein kinase pit1 OS=Schizosa...    32   3.2  
sp|P35210|SPT23_YEAST Protein SPT23 OS=Saccharomyces cerevisiae ...    31   5.4  
sp|Q8BX22|SALL4_MOUSE Sal-like protein 4 OS=Mus musculus GN=Sall...    31   5.4  
sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2      31   5.4  
sp|P14629|ERCC5_XENLA DNA repair protein complementing XP-G cell...    30   7.1  

>sp|Q04749|AVO2_YEAST Target of rapamycin complex 2 subunit AVO2
           OS=Saccharomyces cerevisiae GN=AVO2 PE=1 SV=1
          Length = 426

 Score = 35.4 bits (80), Expect = 0.22
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSR---HSLSKSKKP 421
           IY +  +  + + PPL A   P+ FR  TP +     F+D PSP LS    +SL  +  P
Sbjct: 193 IYSKVLKEVKKKGPPLGAGKKPSSFR--TPILNAKATFEDGPSPVLSMNSPYSLYSNNSP 250

Query: 422 -------VSFNDTSGN 448
                  +S + TSGN
Sbjct: 251 LPVLPRRISTHTTSGN 266


>sp|Q9CNA2|Y531_PASMU Uncharacterized protein PM0531 OS=Pasteurella
           multocida GN=PM0531 PE=4 SV=1
          Length = 179

 Score = 33.9 bits (76), Expect = 0.64
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = +3

Query: 213 QNLYINTGPLEPQFIYEQIGAHRCNAP----LYLPPISPITSAVGHLKCRSQK 359
           QN + NT  ++ Q +YE    H C+ P    + LPPI P+T A+    CR  K
Sbjct: 117 QNFFPNTHGVDAQVVYEMY-LHLCDQPVQNEILLPPIQPMTKAI----CREIK 164


>sp|O14132|PIT1_SCHPO Sporulation protein kinase pit1
           OS=Schizosaccharomyces pombe GN=pit1 PE=1 SV=1
          Length = 650

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 34/114 (29%), Positives = 46/114 (40%)
 Frame = +2

Query: 101 SITGQALTTSLPKTCETTPSQYYKSTFFHLLPCDNLSPKPIY*YRTLGATIYLRADRSSQ 280
           SIT       LP+   +TP       F      D+ SPK     R L +T +L A   SQ
Sbjct: 434 SITSSTFFPVLPQIRPSTPLNLKLRNFIISSSEDSTSPKAKEFDRPLPSTEFLVAINKSQ 493

Query: 281 MQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSRHSLSKSKKPVSFNDTS 442
                    N PN  +SG+ ++  +    D  SPQLS  S    ++  S N  S
Sbjct: 494 ----EALLNNSPN-SKSGSTQLSASTCLSDLISPQLSILSHEDKRENQSVNSES 542


>sp|P35210|SPT23_YEAST Protein SPT23 OS=Saccharomyces cerevisiae
           GN=SPT23 PE=1 SV=2
          Length = 1082

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 317 NYFRSGTPKMQVAKKFDDEPSPQLSRHSLSKSKKPVSFNDTSGNELHTSIISWHS 481
           N  ++ T  M   + F   PSP  S    + S   + F++ + N LH S+ SW S
Sbjct: 385 NNIKTNTAMMNNNRHF---PSPNSSSEDSNHSFSDIHFSNNNDNNLHRSLDSWSS 436


>sp|Q8BX22|SALL4_MOUSE Sal-like protein 4 OS=Mus musculus GN=Sall4
           PE=1 SV=1
          Length = 1067

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 22/70 (31%), Positives = 30/70 (42%)
 Frame = +3

Query: 309 ISPITSAVGHLKCRSQKSSMTSPAHSCRVTH*AKARSLYPSTIPRVTNYTQASSPGTLSL 488
           +SP  S  G +K RS +        SCRV    +  SL P+ I     + +   PGT   
Sbjct: 797 VSPANSQAGSVKSRSPEGHKAEGVESCRVDTEGRT-SLPPTFIRAQPTFVKVEVPGTFVG 855

Query: 489 PKPILFYPSG 518
           P  +   PSG
Sbjct: 856 PPSM---PSG 862


>sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2
          Length = 5478

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
 Frame = +2

Query: 5    EESALNHISIGLKGSTKYMH*WQTKIM---DCYPPSITGQALTTSLPKTCETTPSQYYKS 175
            EES  +H S    G+        T ++       P  +G   TT+LP +  TTP    KS
Sbjct: 4631 EESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGST-TTPGLSEKS 4689

Query: 176  TFFHLLPCDNLSPKPIY*YRTLGATIYLRADRSSQMQCPPLSATNLPNYFRSGT 337
            T FH  P    +      + +  +T   R++ S+ +   P++    P+  RS T
Sbjct: 4690 TTFHSSPSSTPTT-----HFSASSTTLGRSEESTTVHSSPVATATTPSPARSTT 4738


>sp|P14629|ERCC5_XENLA DNA repair protein complementing XP-G cells
           homolog OS=Xenopus laevis GN=ercc5 PE=2 SV=1
          Length = 1196

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +2

Query: 236 TLGATIYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDD 370
           TLGA++ +++   S MQC   +A +LPNY RS  P  Q+ +   D
Sbjct: 446 TLGASL-IKSISPSSMQCQESTADSLPNYTRS-KPVSQIEEPMAD 488
tr_hit_id Q4PDR6
Definition tr|Q4PDR6|Q4PDR6_USTMA Putative uncharacterized protein OS=Ustilago maydis
Align length 69
Score (bit) 38.1
E-value 0.39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911824|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_F02.
         (597 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4PDR6|Q4PDR6_USTMA Putative uncharacterized protein OS=Ustil...    38   0.39 
tr|Q02316|Q02316_LENED Le.MFB1 protein OS=Lentinula edodes GN=Le...    38   0.39 
tr|A6ZMC7|A6ZMC7_YEAS7 Component of a complex containing the Tor...    37   1.1  
tr|A9US29|A9US29_MONBE Predicted protein OS=Monosiga brevicollis...    35   2.5  
tr|B5VPJ5|B5VPJ5_YEAS6 YMR068Wp-like protein (Fragment) OS=Sacch...    35   2.5  
tr|B3LLW1|B3LLW1_YEAS1 Putative uncharacterized protein OS=Sacch...    35   2.5  
tr|A7R6Z0|A7R6Z0_VITVI Chromosome undetermined scaffold_1496, wh...    35   3.3  
tr|B3CJG2|B3CJG2_9VIRU RNA-dependent RNA polymerase OS=Lettuce v...    34   5.6  
tr|Q48DX1|Q48DX1_PSE14 Putative uncharacterized protein OS=Pseud...    34   7.3  
tr|Q3S8Y3|Q3S8Y3_PSESH Ptx18 (Putative uncharacterized protein t...    34   7.3  
tr|Q0EE01|Q0EE01_PSESF Putative uncharacterized protein txi11 OS...    34   7.3  
tr|Q4WNA7|Q4WNA7_ASPFU SAM and PH domain protein (Boi1), putativ...    34   7.3  
tr|A4H4N1|A4H4N1_LEIBR Putative uncharacterized protein OS=Leish...    33   9.5  

>tr|Q4PDR6|Q4PDR6_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM01747.1 PE=4 SV=1
          Length = 433

 Score = 38.1 bits (87), Expect = 0.39
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +2

Query: 272 SSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSRHSLSKSKKPVSFNDTSGNE 451
           S+ M  PP S ++  ++  S T  + +     D   P LS +S+S S   V FN T G++
Sbjct: 61  SNNMSIPPYSLSSSRSFSSSSTASLPIVHIPGD---PNLSDNSMSNSNNGVDFNKTVGHD 117

Query: 452 LHTSIISWH 478
             T  ++W+
Sbjct: 118 AGTQPVAWN 126


>tr|Q02316|Q02316_LENED Le.MFB1 protein OS=Lentinula edodes
           GN=Le.MFB1 PE=2 SV=2
          Length = 2140

 Score = 38.1 bits (87), Expect = 0.39
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +3

Query: 297 YLPPISPITSAVGHLKCRSQKSSMTSPAHSCRVTH*AKARSL---YPSTIPRVTNYTQ-- 461
           Y  P+SP  S+V      S   S+  P+++   TH   ++SL   YPS I   + Y Q  
Sbjct: 349 YPHPVSPSVSSVSLRPINSSPGSVLPPSYAVHTTHPIPSQSLLAPYPSVITSSSTYLQDP 408

Query: 462 ASSPGTLSLPKP 497
            ++  TL +PKP
Sbjct: 409 LNAYATLGMPKP 420


>tr|A6ZMC7|A6ZMC7_YEAS7 Component of a complex containing the Tor2p
           kinase and other proteins OS=Saccharomyces cerevisiae
           (strain YJM789) GN=AVO2 PE=4 SV=1
          Length = 426

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSR---HSLSKSKKP 421
           IY +  +  + + PPL A   P+ FR  TP +     F+D PSP LS    +SL  +  P
Sbjct: 193 IYSKVLKEVKKKAPPLGAGKKPSSFR--TPILNAKATFEDGPSPVLSMNSPYSLYSNNSP 250

Query: 422 -------VSFNDTSGN 448
                  +S + TSGN
Sbjct: 251 LPVLPRRISTHTTSGN 266


>tr|A9US29|A9US29_MONBE Predicted protein OS=Monosiga brevicollis
           GN=22786 PE=4 SV=1
          Length = 310

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +2

Query: 80  IMDCYPPSITGQALTTSLPKTCETTPSQY---YKSTFFHLLPCDNLSPKPIY*YRTLGAT 250
           + DC PP+  G  +  SL K C   P+      + T  H + CDN+S   ++        
Sbjct: 193 LWDCLPPATAGVVVRESLAKNCCPAPALVECALQFTRSHNIKCDNVSVTVVFLRGRAACP 252

Query: 251 IYLRADRSSQMQCP 292
           ++    RSS+   P
Sbjct: 253 LHASVSRSSRASTP 266


>tr|B5VPJ5|B5VPJ5_YEAS6 YMR068Wp-like protein (Fragment)
           OS=Saccharomyces cerevisiae (strain AWRI1631)
           GN=AWRI1631_132080 PE=4 SV=1
          Length = 346

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSR---HSLSKSKKP 421
           IY +  +  + + PPL A   P+ FR  TP +     F+D PSP LS    +SL  +  P
Sbjct: 193 IYSKVLKEVKKKGPPLGAGKKPSSFR--TPILNAKATFEDGPSPVLSMNSPYSLYSNNSP 250

Query: 422 -------VSFNDTSGN 448
                  +S + TSGN
Sbjct: 251 LPVLPRRISTHTTSGN 266


>tr|B3LLW1|B3LLW1_YEAS1 Putative uncharacterized protein
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_01960 PE=4 SV=1
          Length = 426

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAKKFDDEPSPQLSR---HSLSKSKKP 421
           IY +  +  + + PPL A   P+ FR  TP +     F+D PSP LS    +SL  +  P
Sbjct: 193 IYSKVLKEVKKKGPPLGAGKKPSSFR--TPILNAKATFEDGPSPVLSMNSPYSLYSNNSP 250

Query: 422 -------VSFNDTSGN 448
                  +S + TSGN
Sbjct: 251 LPVLPRRISTHTTSGN 266


>tr|A7R6Z0|A7R6Z0_VITVI Chromosome undetermined scaffold_1496, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00008483001 PE=4 SV=1
          Length = 343

 Score = 35.0 bits (79), Expect = 3.3
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
 Frame = +3

Query: 261 EQIGAHRCNAPLYLPPISP-ITSAVGHLKCRSQKSSMTSPAHSCRVTH*AKARSLY--PS 431
           ++  + R +  L+LP +SP  T   G     S   ++T+P  +          SL+  PS
Sbjct: 119 QEAASKRVHPTLHLPAVSPPSTQVAGLFASSSTTGALTAPQQTFASASSGSGFSLFGTPS 178

Query: 432 TIPRVTNYTQASSPGTLSLPKPILFYPSG 518
           + P  T  +   +  T S P P LF  SG
Sbjct: 179 SAPSATTTSSLFTTPTTSAPVPSLFGTSG 207


>tr|B3CJG2|B3CJG2_9VIRU RNA-dependent RNA polymerase OS=Lettuce virus
            X GN=RdRp PE=4 SV=1
          Length = 1708

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
 Frame = +2

Query: 179  FFHLLPCDNLSPKPIY*YRTLGATIYLRADRSSQMQCPPLSATNLPNYFRSGTPKMQVAK 358
            F H LP D+++PKP    R                Q PP  A+      +   P     +
Sbjct: 732  FGHPLPGDSVNPKPEDKPRPAPGN-----------QTPPAPAS------KETPPPQSTHQ 774

Query: 359  KFDDEPSP-QLSRHSLSKSKKP-----VSFNDTSGNELHTSIISWHSVLAKANSVLPLGS 520
              DD  SP Q +  + ++ + P        +D   NEL     S HS     N+ +PL +
Sbjct: 775  ATDDSTSPFQANTSNRTRGQAPPHPQTAGHHDGDSNELPKKNFS-HS--PPWNAWIPLLN 831

Query: 521  MIGFHHHQSQANPVHFLV 574
              GF+ H+ Q NP  FL+
Sbjct: 832  AHGFNGHEQQLNPEGFLI 849


>tr|Q48DX1|Q48DX1_PSE14 Putative uncharacterized protein
           OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
           Race 6) GN=PSPPH_4302 PE=4 SV=1
          Length = 421

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNY----FRSGTPKMQVAKKFDDEPSPQLSRHSLS---- 406
           I   A   SQ++C P SA            SGT +  + K F +E  P +  HS++    
Sbjct: 315 IVFNAYIGSQVKCRPASALFATARRIAPIASGTAQKNIGKLFIEEHCPWVLEHSINIVEG 374

Query: 407 KSKKPVSFNDTSGNELHTSIISWHSVLAKANSVLPL 514
           ++  P+  NDTS   LH   +++   + KA +   L
Sbjct: 375 QAVLPMIDNDTSLGYLHVVGVTYQDSVQKAKTATQL 410


>tr|Q3S8Y3|Q3S8Y3_PSESH Ptx18 (Putative uncharacterized protein
           txi11) OS=Pseudomonas syringae pv. phaseolicola GN=txi11
           PE=4 SV=1
          Length = 421

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 251 IYLRADRSSQMQCPPLSATNLPNY----FRSGTPKMQVAKKFDDEPSPQLSRHSLS---- 406
           I   A   SQ++C P SA            SGT +  + K F +E  P +  HS++    
Sbjct: 315 IVFNAYIGSQVKCRPASALFATARRIAPIASGTAQKNIGKLFIEEHCPWVLEHSINIVEG 374

Query: 407 KSKKPVSFNDTSGNELHTSIISWHSVLAKANSVLPL 514
           ++  P+  NDTS   LH   +++   + KA +   L
Sbjct: 375 QAVLPMIDNDTSLGYLHVVGVTYQDSVQKAKTATQL 410