BP911827
Clone id YMU001_000009_F05
Library
Length 439
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCACTATCATCACTTTCACTTTGCACATAGTTGACACGTTTACCTTTGAAGGTAACCTT
CTTGCCGCCGTTGTCGCCATTGCCGCCATTGCCTTTGGTACAAAATTGAGGTGGATGCCC
CAATTTCCCGCACTTCACACATTTTTTGATTTTGTAGCATTCGGAAGATAGGTGGTTGTA
CTTCCCGCAATGCTTGCAAGCCTTGGTGTGCTTTGAACTTGAAACATAGAGTGCTTTTGA
TGCATTAGTTTCATTGTGTGGGTGCTTGTTGTTATGGTCCTCTTGGAGAGAGTTGATTAC
ACTTTCTAGTGTAGGGATAGGCTCTTTTTCCTTAAGTATGGTTACAATATTGTCATATGT
AGAAGGAAGTGCTTTTAGAAGAACCGCAACTTTATCATCATCATCTATATGACACTCAAT
GTATGAAAGTTGAGTGCAT
■■Homology search results ■■ -
sp_hit_id P04146
Definition sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster
Align length 116
Score (bit) 51.2
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911827|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_F05.
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 51 2e-06
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 48 2e-05
sp|P05890|GAG_HV1RH Gag polyprotein OS=Human immunodeficiency vi... 45 1e-04
sp|P12495|GAG_HV1Z2 Gag polyprotein OS=Human immunodeficiency vi... 44 4e-04
sp|P16087|GAG_FIVPE Gag polyprotein OS=Feline immunodeficiency v... 44 4e-04
sp|P04594|GAG_HV1MA Gag polyprotein OS=Human immunodeficiency vi... 43 5e-04
sp|P35962|GAG_HV1Y2 Gag polyprotein OS=Human immunodeficiency vi... 43 7e-04
sp|P19027|GAG_FIVSD Gag polyprotein OS=Feline immunodeficiency v... 43 7e-04
sp|P12499|POL_HV1Z2 Gag-Pol polyprotein OS=Human immunodeficienc... 42 9e-04
sp|P04588|POL_HV1MA Gag-Pol polyprotein OS=Human immunodeficienc... 42 0.001
sp|P20873|GAG_HV1JR Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|P35963|POL_HV1Y2 Gag-Pol polyprotein OS=Human immunodeficienc... 42 0.001
sp|P05892|GAG_SIVVT Gag polyprotein OS=Simian immunodeficiency v... 42 0.001
sp|Q70622|GAG_HV1LW Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|P03348|GAG_HV1BR Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|Q73367|GAG_HV1B9 Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|P04593|GAG_HV1B5 Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|P03349|GAG_HV1A2 Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|O89291|GAG_HV193 Gag polyprotein OS=Human immunodeficiency vi... 42 0.001
sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficien... 41 0.002
sp|Q02843|GAG_SIVG1 Gag polyprotein OS=Simian immunodeficiency v... 41 0.002
sp|Q9Q720|POL_HV1V9 Gag-Pol polyprotein OS=Human immunodeficienc... 41 0.002
sp|Q9Q721|GAG_HV1V9 Gag polyprotein OS=Human immunodeficiency vi... 41 0.002
sp|P12493|GAG_HV1N5 Gag polyprotein OS=Human immunodeficiency vi... 41 0.002
sp|P05959|POL_HV1RH Gag-Pol polyprotein OS=Human immunodeficienc... 40 0.003
sp|Q73368|POL_HV1B9 Gag-Pol polyprotein OS=Human immunodeficienc... 40 0.003
sp|O89290|POL_HV193 Gag-Pol polyprotein OS=Human immunodeficienc... 40 0.003
sp|P04591|GAG_HV1H2 Gag polyprotein OS=Human immunodeficiency vi... 40 0.003
sp|Q05313|GAG_FIVWO Gag polyprotein OS=Feline immunodeficiency v... 40 0.003
sp|P20892|POL_HV1OY Gag-Pol polyprotein OS=Human immunodeficienc... 40 0.004

>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster
GN=GIP PE=1 SV=3
Length = 1409

Score = 51.2 bits (121), Expect = 2e-06
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 27/116 (23%)
Frame = -2

Query: 408 IDDDDKVAVLLKALPSTYDNIVTILK-----------------------EKEPIPTLESV 298
I++ DK++ LL LPS YD I+T ++ + + T + V
Sbjct: 135 IEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKV 194

Query: 297 INSLQEDHNNKHPHN----ETNASKALYVSSSKHTKACKHCGKYNHLSSECYKIKK 142
+N++ ++NN + +N K ++ +SK+ C HCG+ H+ +C+ K+
Sbjct: 195 MNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHYKR 250


>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 48.1 bits (113), Expect = 2e-05
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = -2

Query: 435 TQLSYIECHIDDDDKVAVLLKALPSTYDNI-VTILKEKEPIPTLESVINSLQEDHNNKHP 259
TQL+ + I+++DK +LL +LPS+YDN+ TIL K I + L + K P
Sbjct: 130 TQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKP 189

Query: 258 HNE-----TNASKALYVSSSKHTKACKHCGKYNHLSSECYKIKKCVKCGKLGHPPQFC 100
N+ T Y SS + GK + S +++ C C + GH + C
Sbjct: 190 ENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKS--RVRNCYNCNQPGHFKRDC 245


>sp|P05890|GAG_HV1RH Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate RF/HAT3 group M subtype B) GN=gag PE=3
SV=3
Length = 501

Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 14/125 (11%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALYVSSS----KHTKA 199
TILK P TLE ++ + Q H TN++ + + +
Sbjct: 332 TILKALGPAATLEEMMTACQGVGGPSHKARILAEAMSQVTNSATIMLQKGNFRDQRKIVK 391

Query: 198 CKHCGKYNHLSSECYKIKK--CVKCGKLGHPPQFCTXXXXXXXXXXXXKVTFKGKRVNYV 25
C +CGK H++ C +K C KCGK GH + CT + KG+ N++
Sbjct: 392 CFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTNEGRQANFLGKIWPSHKGRPGNFL 451

Query: 24 QSESD 10
QS +
Sbjct: 452 QSRPE 456


>sp|P12495|GAG_HV1Z2 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate Z2/CDC-Z34 group M subtype D) GN=gag
PE=1 SV=3
Length = 501

Score = 43.5 bits (101), Expect = 4e-04
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALYVSSS-----KHTK 202
TILK P TLE ++ + Q H TN++ A+ + + T
Sbjct: 333 TILKALGPQATLEEMMTACQGVGGPSHKARVLAEAMSQATNSAAAVMMQRGNFKGPRKTI 392

Query: 201 ACKHCGKYNHLSSECY--KIKKCVKCGKLGHPPQFCTXXXXXXXXXXXXKVTFKGKRVNY 28
C +CGK H++ C + K C KCGK GH + CT + KG+ N+
Sbjct: 393 KCFNCGKEGHIAKNCRAPRRKGCWKCGKEGHQLKDCTERQANFLGKIWP--SHKGRPGNF 450

Query: 27 VQSESD 10
+QS +
Sbjct: 451 LQSRPE 456


>sp|P16087|GAG_FIVPE Gag polyprotein OS=Feline immunodeficiency
virus (isolate Petaluma) GN=gag PE=3 SV=1
Length = 450

Score = 43.5 bits (101), Expect = 4e-04
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -2

Query: 324 EPIPTLESVINSLQE--DHNNKHPHNETNASKALYVSSSKHTKACKHCGKYNHLSSECYK 151
+P TLE + + QE K +K V S C +C K HL+ +C +
Sbjct: 333 KPESTLEEKLRACQEIGSPGYKMQLLAEALTKVQVVQSKGSGPVCFNCKKPGHLARQCRE 392

Query: 150 IKKCVKCGKLGHPPQFC 100
+KKC KCGK GH C
Sbjct: 393 VKKCNKCGKPGHLAAKC 409


>sp|P04594|GAG_HV1MA Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate MAL group M subtype A) GN=gag PE=3 SV=3
Length = 505

Score = 43.1 bits (100), Expect = 5e-04
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALYVS-----SSKHTK 202
TILK P TLE ++ + Q H TN++ A+ + K K
Sbjct: 338 TILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSQATNSTAAIMMQRGNFKGQKRIK 397

Query: 201 ACKHCGKYNHLSSECYKIKK--CVKCGKLGHPPQFCTXXXXXXXXXXXXKVTFKGKRVNY 28
C +CGK HL+ C +K C KCGK GH + CT + KG+ N+
Sbjct: 398 -CFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWP--SHKGRPGNF 454

Query: 27 VQSESD 10
+QS +
Sbjct: 455 LQSRPE 460


>sp|P35962|GAG_HV1Y2 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate YU-2 group M subtype B) GN=gag PE=1 SV=2
Length = 500

Score = 42.7 bits (99), Expect = 7e-04
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALY----VSSSKHTKA 199
TILK P TLE ++ + Q H TN++ + + + T
Sbjct: 332 TILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKTVK 391

Query: 198 CKHCGKYNHLSSECYKIKK--CVKCGKLGHPPQFCTXXXXXXXXXXXXKVTFKGKRVNYV 25
C +CGK H++ C +K C KCGK GH + CT + KG+ N++
Sbjct: 392 CFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWP--SHKGRPGNFL 449

Query: 24 QSESD 10
QS +
Sbjct: 450 QSRPE 454


>sp|P19027|GAG_FIVSD Gag polyprotein OS=Feline immunodeficiency
virus (strain San Diego) GN=gag PE=3 SV=1
Length = 450

Score = 42.7 bits (99), Expect = 7e-04
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -2

Query: 324 EPIPTLESVINSLQE--DHNNKHPHNETNASKALYVSSSKHTKACKHCGKYNHLSSECYK 151
+P TLE + + QE K +K V S C +C K HL+ +C
Sbjct: 333 KPESTLEEKLRACQEIGSPGYKMQLLAEALTKVQVVQSKGSGPVCFNCKKPGHLARQCRD 392

Query: 150 IKKCVKCGKLGHPPQFC 100
+KKC KCGK GH C
Sbjct: 393 VKKCNKCGKPGHLAAKC 409


>sp|P12499|POL_HV1Z2 Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate Z2/CDC-Z34 group M subtype D)
GN=gag-pol PE=1 SV=3
Length = 1436

Score = 42.4 bits (98), Expect = 9e-04
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALYVSSS-----KHTK 202
TILK P TLE ++ + Q H TN++ A+ + + T
Sbjct: 333 TILKALGPQATLEEMMTACQGVGGPSHKARVLAEAMSQATNSAAAVMMQRGNFKGPRKTI 392

Query: 201 ACKHCGKYNHLSSECY--KIKKCVKCGKLGHPPQFCT 97
C +CGK H++ C + K C KCGK GH + CT
Sbjct: 393 KCFNCGKEGHIAKNCRAPRRKGCWKCGKEGHQLKDCT 429


>sp|P04588|POL_HV1MA Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate MAL group M subtype A) GN=gag-pol
PE=1 SV=3
Length = 1440

Score = 42.0 bits (97), Expect = 0.001
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = -2

Query: 342 TILKEKEPIPTLESVINSLQEDHNNKHP--------HNETNASKALYVS-----SSKHTK 202
TILK P TLE ++ + Q H TN++ A+ + K K
Sbjct: 338 TILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSQATNSTAAIMMQRGNFKGQKRIK 397

Query: 201 ACKHCGKYNHLSSECYKIKK--CVKCGKLGHPPQFCT 97
C +CGK HL+ C +K C KCGK GH + CT
Sbjct: 398 -CFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCT 433


tr_hit_id B6V6Z8
Definition tr|B6V6Z8|B6V6Z8_DROME Polyprotein OS=Drosophila melanogaster
Align length 112
Score (bit) 57.0
E-value 5.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911827|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_F05.
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6V6Z8|B6V6Z8_DROME Polyprotein OS=Drosophila melanogaster PE... 57 5e-07
tr|Q2QUM8|Q2QUM8_ORYSJ Retrotransposon protein, putative, Ty1-co... 54 4e-06
tr|Q6DBB5|Q6DBB5_ARATH At5g39185 OS=Arabidopsis thaliana PE=2 SV=1 52 1e-05
tr|Q9ZQK0|Q9ZQK0_ARATH Putative retroelement pol polyprotein OS=... 52 2e-05
tr|A5AHJ0|A5AHJ0_VITVI Putative uncharacterized protein OS=Vitis... 51 2e-05
tr|Q08461|Q08461_DROSI Copia OS=Drosophila simulans GN=GIP PE=4 ... 51 2e-05
tr|Q9FXB7|Q9FXB7_ARATH Putative retroelement polyprotein OS=Arab... 51 3e-05
tr|Q7XEC4|Q7XEC4_ORYSJ Retrotransposon protein, putative, Ty1-co... 50 7e-05
tr|Q967L5|Q967L5_AEDAE Putative uncharacterized protein OS=Aedes... 49 9e-05
tr|Q7XSZ1|Q7XSZ1_ORYSJ OSJNBb0056F09.5 protein OS=Oryza sativa s... 49 1e-04
tr|Q2QP15|Q2QP15_ORYSJ Retrotransposon protein, putative, Ty1-co... 49 1e-04
tr|Q2QVJ2|Q2QVJ2_ORYSJ Retrotransposon protein, putative, Ty1-co... 49 2e-04
tr|Q8AC46|Q8AC46_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 48 3e-04
tr|A8T891|A8T891_9HIV1 Gag polyprotein OS=Human immunodeficiency... 48 3e-04
tr|Q8J3J9|Q8J3J9_9HIV1 Gag polyprotein OS=Human immunodeficiency... 47 4e-04
tr|Q8H023|Q8H023_ORYSJ Putative retrovirus-related pol polyprote... 47 4e-04
tr|Q8J316|Q8J316_9HIV1 Gag polyprotein OS=Human immunodeficiency... 47 5e-04
tr|Q596V8|Q596V8_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 47 5e-04
tr|Q52S47|Q52S47_9HIV1 Gag polyprotein OS=Human immunodeficiency... 47 5e-04
tr|Q52S34|Q52S34_9HIV1 Gag polyprotein OS=Human immunodeficiency... 47 5e-04
tr|Q2NN60|Q2NN60_9HIV1 Gag polyprotein OS=Human immunodeficiency... 47 5e-04
tr|A7QKV5|A7QKV5_VITVI Chromosome chr8 scaffold_115, whole genom... 47 5e-04
tr|Q5MCD9|Q5MCD9_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 46 8e-04
tr|Q2NN69|Q2NN69_9HIV1 Gag polyprotein OS=Human immunodeficiency... 46 8e-04
tr|B8XAE2|B8XAE2_9HIV1 Gag protein (Fragment) OS=Human immunodef... 46 8e-04
tr|B3FM08|B3FM08_9HIV1 Gag protein OS=Human immunodeficiency vir... 46 8e-04
tr|B3FLG7|B3FLG7_9HIV1 Gag protein OS=Human immunodeficiency vir... 46 8e-04
tr|Q8ADU3|Q8ADU3_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 46 0.001
tr|Q5S2P3|Q5S2P3_9HIV1 Gag polyprotein OS=Human immunodeficiency... 46 0.001
tr|Q56TR7|Q56TR7_9HIV1 Gag polyprotein OS=Human immunodeficiency... 46 0.001

>tr|B6V6Z8|B6V6Z8_DROME Polyprotein OS=Drosophila melanogaster PE=4
SV=1
Length = 1319

Score = 57.0 bits (136), Expect = 5e-07
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = -2

Query: 432 QLSYIECHIDDDDKVAVLLKALPSTYDNIVTILKEKEPIPTLESVINSLQEDHNNKHPHN 253
+L+ ++ I+D+ K +LL +LP++++N V ++ ++ +PT E+V L E+ K +
Sbjct: 131 KLAEMDITINDELKSIMLLSSLPNSWENFVVAIETRDTLPTFETVKVKLLEEGARKQERD 190

Query: 252 ETNAS-KALYVSSSKHTKACKHCGKYNHLSSECYKIKKCVKCGKLGHPPQFC 100
+ S +A+YV + H A + + N+L +K KC C K GH + C
Sbjct: 191 DREGSVQAVYVHTKLHGTAKQKQREENNLEKHSFK-GKCYICEKFGHRAREC 241


>tr|Q2QUM8|Q2QUM8_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g15720 PE=4 SV=2
Length = 407

Score = 53.9 bits (128), Expect = 4e-06
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Frame = -2

Query: 435 TQLSYIECHIDDDDKVAVLLKALPSTYDNIVTILK-EKEPIPTLESVINSLQEDHNNKHP 259
T L ++ +DD+DK V L +LP +Y+++VT L KE I T + L D K+
Sbjct: 116 TDLVKMDVEVDDEDKAIVFLCSLPESYEHVVTTLTYGKETIKTKDITSALLARDQMRKNK 175

Query: 258 HNETNASKALYV-----------SSSKHTKACKHCGKYNHLSSECYKIK 145
ET+ ++ L V + K C C ++ H+S EC +K
Sbjct: 176 EGETSQAEGLLVKEDHAGHKVKKNKKKKMVQCFRCDEWGHISRECPTLK 224


>tr|Q6DBB5|Q6DBB5_ARATH At5g39185 OS=Arabidopsis thaliana PE=2 SV=1
Length = 348

Score = 52.0 bits (123), Expect = 1e-05
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Frame = -2

Query: 402 DDDKVAVLLKALP-STYDNIVTILKEKEPIPTLESVINSLQEDHNNK---HPHNETNASK 235
++DK+ L L S Y + + L + P+P+LE N+L +D +K H+E N
Sbjct: 179 EEDKLHQFLMGLDESMYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRLHDERNDGV 238

Query: 234 ALYVSSSKHTKA----------CKHCGKYNHLSSECYKIKKCVKCGKLGHPP 109
+ V ++ T++ C HCG+ HL+ C+K+ +G+PP
Sbjct: 239 SFAVQTTPRTRSLTKNKDSAIVCSHCGRLGHLAENCFKL--------VGYPP 282


>tr|Q9ZQK0|Q9ZQK0_ARATH Putative retroelement pol polyprotein
OS=Arabidopsis thaliana GN=At2g07420 PE=2 SV=1
Length = 1664

Score = 51.6 bits (122), Expect = 2e-05
Identities = 26/93 (27%), Positives = 48/93 (51%)
Frame = -2

Query: 402 DDDKVAVLLKALPSTYDNIVTILKEKEPIPTLESVINSLQEDHNNKHPHNETNASKALYV 223
+ DKV LL L STY++++ L + +P LE V + +Q++ N+ + N KAL+
Sbjct: 161 EQDKVFGLLLTLSSTYNDLIKHLLRADKLPNLEEVCSQIQKEQANRGNYKYDNNKKALW- 219

Query: 222 SSSKHTKACKHCGKYNHLSSECYKIKKCVKCGK 124
C+HC + H +C+ + ++ G+
Sbjct: 220 --------CEHCKRSGHTKEKCWTLHPHLRPGR 244


>tr|A5AHJ0|A5AHJ0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043469 PE=4 SV=1
Length = 798

Score = 51.2 bits (121), Expect = 2e-05
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Frame = -2

Query: 435 TQLSYIECHIDDDDKVAVLLKALP--STYDNIVTILKEKEPIPTLESVINSLQEDHNNKH 262
+ L I+ +D DK + L +LP STY+N+VT L + LE + ++L + K
Sbjct: 43 SDLKQIDVKFEDKDKALMXLNSLPVSSTYENLVTTLMWGKETLDLEEITSALLGLNQRKK 102

Query: 261 PHNETNASKALYVSSSKHTKACKHCGKYNHLSS--ECYKIK--KCVKCGKLGHPPQFC 100
++E++ + L ++ + K + ++ S E KIK +C KCGK GH + C
Sbjct: 103 ANDESSQGEGLMAKRNQERERNKFRSELSNNKSRFESKKIKDIQCYKCGKKGHMKRDC 160


>tr|Q08461|Q08461_DROSI Copia OS=Drosophila simulans GN=GIP PE=4
SV=1
Length = 1409

Score = 51.2 bits (121), Expect = 2e-05
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Frame = -2

Query: 408 IDDDDKVAVLLKALPSTYDNIVTILKE-KEPIPTLESVINSL-------QEDHN------ 271
I++ DK++ LL LPS YD I+T ++ E TL V N L + DHN
Sbjct: 135 IEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKV 194

Query: 270 -NKHPHNETNA------------SKALYVSSSKHTKACKHCGKYNHLSSECYKIKK 142
N HN+ N K ++ +SK+ C HCG+ H+ +C+ K+
Sbjct: 195 MNAIVHNKNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHYKR 250


>tr|Q9FXB7|Q9FXB7_ARATH Putative retroelement polyprotein
OS=Arabidopsis thaliana GN=F25P12.89 PE=4 SV=1
Length = 1486

Score = 50.8 bits (120), Expect = 3e-05
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Frame = -2

Query: 402 DDDKVAVLLKALP-STYDNIVTILKEKEPIPTLESVINSLQEDHNNK---HPHNET--NA 241
++DK+ L L S Y + + L + P+P+LE N+L +D +K HNE
Sbjct: 180 EEDKLHQFLMGLDESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHNERVDGV 239

Query: 240 SKALYVSS----SKHTKACKHCGKYNHLSSECYKIKKCVKCGKLGHPP 109
S A+ +S S + C +CG+ HL+ +C+K+ +G+PP
Sbjct: 240 SFAVQTTSRPRDSSENRVCSNCGRVGHLAEQCFKL--------IGYPP 279


>tr|Q7XEC4|Q7XEC4_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g29210 PE=4 SV=2
Length = 415

Score = 49.7 bits (117), Expect = 7e-05
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Frame = -2

Query: 429 LSYIECHIDDDDKVAVLLKALPSTYDNIVTILKE-KEPIPTLESVINSLQEDHNNKHPHN 253
LS ++ +DD+DK +LL +LP +Y+++VT L K+ + T E + + L D +
Sbjct: 133 LSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTEEIISSLLARDLRRSKKNE 192

Query: 252 ETNAS--KALY----------VSSSKHTKA-CKHCGKYNHLSSECYKIKK 142
T AS K+L VS SK A C C ++ H+ C +KK
Sbjct: 193 ATKASQGKSLLVKDKHDHEAGVSKSKEKGARCYKCHEFGHIRRNCPLLKK 242


>tr|Q967L5|Q967L5_AEDAE Putative uncharacterized protein OS=Aedes
aegypti PE=4 SV=1
Length = 1298

Score = 49.3 bits (116), Expect = 9e-05
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = -2

Query: 408 IDDDDKVAVLLKALPSTYDNIVTILKEKEPIP-TLESVINSLQED-----HNNKHPHNET 247
+D D K+ +LL++LP ++D +VT L + TLE V + L ++ + HP +
Sbjct: 137 LDADTKICLLLRSLPPSFDGLVTALDSRSQDDITLEVVKSKLMDEFLRRLERDGHPVKKE 196

Query: 246 NASKALYVSSSKHTKACKHCGKYNHLSSECYKIKKCVK 133
A K V+ + T+ C +C K HL C K+ + K
Sbjct: 197 KAMKTA-VTKTGETRVCFYCKKPGHLQRNCRKLLEAKK 233


>tr|Q7XSZ1|Q7XSZ1_ORYSJ OSJNBb0056F09.5 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0056F09.5 PE=4 SV=2
Length = 371

Score = 48.9 bits (115), Expect = 1e-04
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = -2

Query: 429 LSYIECHIDDDDKVAVLLKALPSTYDNIVTILKE-KEPIPTLESVINSLQEDHNNKHPHN 253
LS ++ +DD+DK +LL +LP +Y+++VT L K+ I T E + + L D +
Sbjct: 153 LSKLDVKLDDEDKAIILLCSLPPSYEHVVTTLMHGKDTIKTEEIISSLLARDLRRSKKNE 212

Query: 252 ETNASKALYVSSSKHTKACKHCGKYNHLSSECYKIKKCVKCGKLGHPPQFC 100
AS+A S KA KH + L S+ K +C KC + GH + C
Sbjct: 213 AMEASQA----ESLLVKA-KHDHEAGVLKSK-EKGARCYKCHEFGHIRRNC 257