BP911830 |
Clone id |
YMU001_000009_F09 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000009_F09. |
Accession |
BP911830 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1900Contig1 |
Sequence |
TCGGCAATGAACGCCACCTAATATGCATTGAAGATCCATTTGAGGTATCGCATGACCTAG GGCGTGTGGTTGATAAACACAGCATTCGGGTCCTACGAGATGAATTTCAGAGAGCTGCAA GAATAATGCGTCAGGATGCAAACCCGTGTATTGCACTGTTTGAACCCTATATCCGACAGA AGGCTCAGGCTGCATAGCGAATGAATGCAGCAGGATGAACGAGCTGTGATTGTGGAAATA TTGAAGGTGCATTTGAGCTCTCCAACAAAGCCTTTTGTTAGCTGGAATACAAGAGATGAA CGATGGGCTCTAGAGTAAGAAGGGAACGGCTTCTGCTTCCTTGTGTTCGCAGTGTCAACT CAGTGGTTTTAGGCATTTGATTGTGCATGTGTCTAGCACACTACAGTGCAAAGGCTTGCT AGAATATTGGAGGCGAGACTTATCAGCTTGGCTCCGGGGGTGCAGTATAGTATACATGGT GCACTTGTACACTATATTTTCCCAACTAGTTAATGTCTGCTCTGCACCATGTTGTGATAT AAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13833 |
Definition |
sp|O13833|CID1_SCHPO Poly(A) RNA polymerase protein cid1 OS=Schizosaccharomyces pombe |
Align length |
46 |
Score (bit) |
46.2 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SY04 |
Definition |
tr|A9SY04|A9SY04_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
59 |
Score (bit) |
104.0 |
E-value |
3.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911830|Adiantum capillus-veneris mRNA, clone: YMU001_000009_F09. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SY04|A9SY04_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21 tr|O64642|O64642_ARATH Expressed protein (Putative uncharacteriz... 102 2e-20 tr|A7PY51|A7PY51_VITVI Chromosome chr15 scaffold_37, whole genom... 99 1e-19 tr|A5BY57|A5BY57_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|Q6ZH89|Q6ZH89_ORYSJ Putative caffeine-induced death protein 1... 97 7e-19 tr|A2X0A3|A2X0A3_ORYSI Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|Q8LMP4|Q8LMP4_ORYSJ Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|Q10A03|Q10A03_ORYSJ cDNA clone:J023057P21, full insert sequen... 91 5e-17 tr|Q0IYN4|Q0IYN4_ORYSJ Os10g0188300 protein (Fragment) OS=Oryza ... 91 5e-17 tr|B8BG11|B8BG11_ORYSI Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|A8I0F7|A8I0F7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 75 2e-12 tr|A7PWW5|A7PWW5_VITVI Chromosome chr19 scaffold_35, whole genom... 64 5e-09 tr|A8NJ51|A8NJ51_COPC7 Putative uncharacterized protein OS=Copri... 48 3e-04 tr|Q8J114|Q8J114_CRYNV CID1 OS=Cryptococcus neoformans var. grub... 48 4e-04 tr|Q8J0Z2|Q8J0Z2_CRYNV CID1 OS=Cryptococcus neoformans var. grub... 48 4e-04 tr|Q8J0Y2|Q8J0Y2_CRYNE CID1 OS=Cryptococcus neoformans var. neof... 48 4e-04 tr|Q8J0W6|Q8J0W6_CRYNE CID1 OS=Cryptococcus neoformans var. neof... 48 4e-04 tr|Q6TGI9|Q6TGI9_CRYGA CID1 OS=Cryptococcus gattii PE=4 SV=1 48 4e-04 tr|Q5Y262|Q5Y262_CRYGA CID1p OS=Cryptococcus gattii GN=CID1 PE=4... 48 4e-04 tr|Q5Y230|Q5Y230_CRYGA CID1p OS=Cryptococcus gattii GN=CID1 PE=4... 48 4e-04 tr|Q5KHN6|Q5KHN6_CRYNE Putative uncharacterized protein OS=Crypt... 48 4e-04 tr|B2WPG1|B2WPG1_PYRTR Poly(A) RNA polymerase cid13 OS=Pyrenopho... 48 4e-04 tr|Q7RWR6|Q7RWR6_NEUCR Predicted protein (Related to caffeine-in... 46 0.001 tr|A7EFW8|A7EFW8_SCLS1 Putative uncharacterized protein OS=Scler... 45 0.002 tr|Q0UIK8|Q0UIK8_PHANO Putative uncharacterized protein OS=Phaeo... 45 0.002 tr|B6K2A2|B6K2A2_SCHJP Caffeine-induced death protein OS=Schizos... 45 0.002 tr|B0D7E5|B0D7E5_LACBS Predicted protein OS=Laccaria bicolor (st... 45 0.002 tr|Q2H0B3|Q2H0B3_CHAGB Putative uncharacterized protein OS=Chaet... 44 0.005 tr|A4RJH0|A4RJH0_MAGGR Putative uncharacterized protein OS=Magna... 43 0.012 tr|A8PVQ8|A8PVQ8_MALGO Putative uncharacterized protein OS=Malas... 42 0.016
>tr|A9SY04|A9SY04_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189614 PE=4 SV=1 Length = 135
Score = 104 bits (259), Expect = 3e-21 Identities = 46/59 (77%), Positives = 56/59 (94%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYIRQ 179 GNERHLICIEDPFE++HDLGRVVD++SIRVLRDEF+RAA+I+ QD+NP ALFEP+IR+ Sbjct: 76 GNERHLICIEDPFEITHDLGRVVDRNSIRVLRDEFKRAAKILHQDSNPATALFEPFIRE 134
>tr|O64642|O64642_ARATH Expressed protein (Putative uncharacterized protein At2g45620) OS=Arabidopsis thaliana GN=At2g45620 PE=2 SV=2 Length = 764
Score = 102 bits (253), Expect = 2e-20 Identities = 47/57 (82%), Positives = 50/57 (87%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE SHDLGRVVDK SIRVLR+EF+RAARIM QD NPC L EPYI Sbjct: 698 GNDRHLICIEDPFETSHDLGRVVDKFSIRVLREEFERAARIMHQDPNPCAKLLEPYI 754
>tr|A7PY51|A7PY51_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026303001 PE=4 SV=1 Length = 720
Score = 99.4 bits (246), Expect = 1e-19 Identities = 43/57 (75%), Positives = 52/57 (91%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE+SHDLGRVVDK SI+VLR+EF+RAA IM+ D +PC+ LFEPY+ Sbjct: 662 GNDRHLICIEDPFEISHDLGRVVDKFSIKVLREEFERAAYIMQYDPDPCVTLFEPYV 718
>tr|A5BY57|A5BY57_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006352 PE=4 SV=1 Length = 720
Score = 99.4 bits (246), Expect = 1e-19 Identities = 43/57 (75%), Positives = 52/57 (91%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE+SHDLGRVVDK SI+VLR+EF+RAA IM+ D +PC+ LFEPY+ Sbjct: 662 GNDRHLICIEDPFEISHDLGRVVDKFSIKVLREEFERAAYIMQYDPDPCVTLFEPYV 718
>tr|Q6ZH89|Q6ZH89_ORYSJ Putative caffeine-induced death protein 1 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1020_C02.27 PE=4 SV=1 Length = 597
Score = 96.7 bits (239), Expect = 7e-19 Identities = 42/56 (75%), Positives = 51/56 (91%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPY 170 GN+RHLICIEDPFE SHDLGRVVD+ +IRVLR+EF+RAA I++ D +PC+ALFEPY Sbjct: 538 GNDRHLICIEDPFETSHDLGRVVDRQTIRVLREEFERAATILQYDDDPCVALFEPY 593
>tr|A2X0A3|A2X0A3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05643 PE=4 SV=1 Length = 597
Score = 96.7 bits (239), Expect = 7e-19 Identities = 42/56 (75%), Positives = 51/56 (91%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPY 170 GN+RHLICIEDPFE SHDLGRVVD+ +IRVLR+EF+RAA I++ D +PC+ALFEPY Sbjct: 538 GNDRHLICIEDPFETSHDLGRVVDRQTIRVLREEFERAATILQYDDDPCVALFEPY 593
>tr|Q8LMP4|Q8LMP4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g11050 PE=4 SV=1 Length = 138
Score = 90.5 bits (223), Expect = 5e-17 Identities = 41/57 (71%), Positives = 46/57 (80%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE SHDLGRVVD SI LR+EF+RAA I+ D NP I LFEPY+ Sbjct: 76 GNDRHLICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPSITLFEPYV 132
>tr|Q10A03|Q10A03_ORYSJ cDNA clone:J023057P21, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os10g11034 PE=2 SV=1 Length = 320
Score = 90.5 bits (223), Expect = 5e-17 Identities = 41/57 (71%), Positives = 46/57 (80%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE SHDLGRVVD SI LR+EF+RAA I+ D NP I LFEPY+ Sbjct: 258 GNDRHLICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPSITLFEPYV 314
>tr|Q0IYN4|Q0IYN4_ORYSJ Os10g0188300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os10g0188300 PE=4 SV=1 Length = 372
Score = 90.5 bits (223), Expect = 5e-17 Identities = 41/57 (71%), Positives = 46/57 (80%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE SHDLGRVVD SI LR+EF+RAA I+ D NP I LFEPY+ Sbjct: 310 GNDRHLICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPSITLFEPYV 366
>tr|B8BG11|B8BG11_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32948 PE=4 SV=1 Length = 586
Score = 90.5 bits (223), Expect = 5e-17 Identities = 41/57 (71%), Positives = 46/57 (80%) Frame = +3
Query: 3 GNERHLICIEDPFEVSHDLGRVVDKHSIRVLRDEFQRAARIMRQDANPCIALFEPYI 173 GN+RHLICIEDPFE SHDLGRVVD SI LR+EF+RAA I+ D NP I LFEPY+ Sbjct: 524 GNDRHLICIEDPFETSHDLGRVVDNRSIWALREEFERAAEILHLDPNPSITLFEPYV 580
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