BP911845
Clone id YMU001_000009_G12
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TACTCGCCGAAGATACTAAAAGAGAATATGGAGTGACGGATTGCAAAGATAGTTTGACAT
GTATTATGCTACTCAAACTCAGAGCAAAGCTTCTGTCGGGAGGTGATTTCTTTAGCAAAG
GTGGTTCTCTTCTCTGATTCCATCCGAGGAAAGTCTACAAATATAGTCGCATATATACAA
GTGCTTTAGCGTACGGTGTTCGCAACTGTGTTAACAAGCCACGATACAAGACAGAAGGGA
GAGCCTTACCTTAATGGTTTGTGCTCCTTTCTTGAAACGTGGACATTTTTGGGGGCTGTT
ACTGGGCAGCAATCTCATCATTTCTTGAAGAAATTCACAGGGCAATTGTTTTGAAATTTT
TTACTTAGTTACCCAGGGTTTTAAGGCATTTGAGGCTCTCGGAGGCTATAGAAAGACAAA
TAGAAAATTTGATGATGGTGGCTTATGTGTAGCTTTGTCATGTTGTTGCTTGAACTCTTC
AGTACAAAGTTCGATGGTTGTGGCAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P28569
Definition sp|P28569|TRK1_SACBA High-affinity potassium transport protein OS=Saccharomyces bayanus
Align length 34
Score (bit) 31.6
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911845|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_G12.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P28569|TRK1_SACBA High-affinity potassium transport protein O... 32 2.2
sp|P43613|YFL1_YEAST Uncharacterized J domain-containing protein... 30 6.5
sp|A2BTV9|PURL_PROM5 Phosphoribosylformylglycinamidine synthase ... 30 6.5

>sp|P28569|TRK1_SACBA High-affinity potassium transport protein
OS=Saccharomyces bayanus GN=TRK1 PE=3 SV=1
Length = 1241

Score = 31.6 bits (70), Expect = 2.2
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1

Query: 64 LCYSNSEQSFCREVISLAKVVLFSDSIRGKSTNI 165
L Y N+ QSF R++ +L+K+++ + IRGK+ +
Sbjct: 1135 LGYPNTNQSFSRQLTTLSKLIIIAMLIRGKNRGL 1168


>sp|P43613|YFL1_YEAST Uncharacterized J domain-containing protein
YFR041C OS=Saccharomyces cerevisiae GN=YFR041C PE=1 SV=1
Length = 295

Score = 30.0 bits (66), Expect = 6.5
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = -3

Query: 501 TTIELCTEEFKQQHDKATHKPPSSNFLFVFL*PPRASNALKPWVTK*KISKQLPCEFLQE 322
TTIE TE F+ Q++ +T P NF + FL P+ N+ +TK
Sbjct: 22 TTIE--TEIFQLQNEISTKYGPDMNF-YKFLKLPKLQNSSTKEITK-------------N 65

Query: 321 MMRLLPSNSPQKCPRFKKGAQTIKVRLSLLS 229
+ +L P K P+++K + + + +LS
Sbjct: 66 LRKLSKKYHPDKNPKYRKLYERLNLATQILS 96


>sp|A2BTV9|PURL_PROM5 Phosphoribosylformylglycinamidine synthase 2
OS=Prochlorococcus marinus (strain MIT 9515) GN=purL
PE=3 SV=1
Length = 779

Score = 30.0 bits (66), Expect = 6.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2

Query: 407 YRKTNRKFDDGGLCVALSCCCLNSSVQSSMVVAKK 511
Y ++ DGGL +ALS CC+ SS +++ + +K
Sbjct: 660 YISSSHDISDGGLAIALSECCILSSKGANIQLEEK 694


tr_hit_id B6LPP6
Definition tr|B6LPP6|B6LPP6_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 41
Score (bit) 33.1
E-value 8.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911845|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_G12.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6LPP6|B6LPP6_BRAFL Putative uncharacterized protein (Fragmen... 33 8.1

>tr|B6LPP6|B6LPP6_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_184809 PE=4 SV=1
Length = 445

Score = 33.1 bits (74), Expect = 8.1
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3

Query: 12 DTKREYGV-TDCKDSLTCIMLLKLRAKLLSGGDFFSKGGSL 131
DT R+ + DC++ L C + LKLR+++ + GD+ K G +
Sbjct: 316 DTLRKVKIFEDCENGLLCDLALKLRSQVYTPGDYVCKSGEI 356