BP911850
Clone id YMU001_000009_H06
Library
Length 221
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000009_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCTTGATCAGTGAGCTATTACGCACTCTTTCAAGGGTTGGTGCTTCTAGGCAAACCTCCT
GGCTGTCTTTGCACTCCTACCTCCTTTACCACTGAGCGGTCATTTAGGGGCCTTAGCTGG
TGATCTGGGCTGTCCCCTCTCGACGGTGAAGCTTATCCCTCATCGTCTCACTGGTTGACC
CTTTTCCTTCGTTCCTTTTATTTGAACGTTACATCTAGTAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911850|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_H06.
(221 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6N1H4
Definition tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa subsp. indica
Align length 39
Score (bit) 74.3
E-value 2.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911850|Adiantum capillus-veneris mRNA, clone:
YMU001_000009_H06.
(221 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s... 74 2e-15
tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic... 71 2e-13
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino... 60 7e-08
tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino... 60 7e-08
tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh... 42 0.015
tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ... 33 9.4

>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa
subsp. indica PE=4 SV=1
Length = 109

Score = 74.3 bits (181), Expect(2) = 2e-15
Identities = 34/39 (87%), Positives = 38/39 (97%)
Frame = -1

Query: 137 GDSPDHQLRPLNDRSVVKEVGVQRQPGGLPRSTNP*KSA 21
G+SPDHQLRPLNDRSV+KEVGVQRQPGGLPRS++P KSA
Sbjct: 71 GNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109



Score = 31.2 bits (69), Expect(2) = 2e-15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2

Query: 208 RSNKRNEGKGSTSETMRDKLHRREGTA 128
R + + G S SETM DKLHRREG +
Sbjct: 47 RYDPKITGVRSASETMGDKLHRREGNS 73


>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 102

Score = 70.9 bits (172), Expect(2) = 2e-13
Identities = 31/35 (88%), Positives = 35/35 (100%)
Frame = -1

Query: 137 GDSPDHQLRPLNDRSVVKEVGVQRQPGGLPRSTNP 33
G+SPDHQLRPLNDRSV+KEVGVQRQPGGLPRS++P
Sbjct: 68 GNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP 102



Score = 28.1 bits (61), Expect(2) = 2e-13
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2

Query: 178 STSETMRDKLHRREGTA 128
S SE M DKLHRREG +
Sbjct: 54 SASEAMGDKLHRREGNS 70


>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein
OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1
Length = 139

Score = 59.7 bits (143), Expect = 7e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1

Query: 10 VSYYALFQGLVLLGKPPGCLCTPTSFTTERSFRGLS 117
VSYYALF+G +LL +PPGCLC TS TTERSFR LS
Sbjct: 104 VSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 139


>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein
OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1
Length = 133

Score = 59.7 bits (143), Expect = 7e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1

Query: 10 VSYYALFQGLVLLGKPPGCLCTPTSFTTERSFRGLS 117
VSYYALF+G +LL +PPGCLC TS TTERSFR LS
Sbjct: 98 VSYYALFEGWLLLSQPPGCLCDDTSLTTERSFRDLS 133


>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=BMULJ_05092 PE=4 SV=1
Length = 123

Score = 42.0 bits (97), Expect = 0.015
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1

Query: 7 SVSYYALFQGLVLLGKPPGCLCTPTSFTT 93
SVSYYA F+G +LL +PP C PTSF T
Sbjct: 95 SVSYYAFFKGWLLLSQPPDCFSLPTSFPT 123


>tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea
PE=2 SV=1
Length = 182

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3

Query: 9 SELLRTLSRVGASRQTSW 62
SELLRTLSRV AS+ TSW
Sbjct: 155 SELLRTLSRVAASKPTSW 172