| BP911854 |
| Clone id |
YMU001_000010_A05 |
| Library |
YMU01 |
| Length |
484 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_A05. |
| Accession |
BP911854 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
AGCTTCCAATTCTCGAGAACGTTTAGAACTCGCATCAATTTCTTTGTCATTATCTCTTTC
TCTTTTCCTGTTAAGCTTCCCAGATTCATGGATGGGACTAGCAGCCTTGCGGATAAAAGA
GCTGCTTTTGGATAGACCCGAACCTTTCTCCAAAAGTTTTGGTTTTAAGCTTTCAGAGAC
TCTATCCTTTGAAGATTTGTCCCTCTCCTTGTGTGACATCCTGTCGTGATTCCGATTTTC
CTCCCTGGTCTTTGACTTGGACACCCTTTCACTCTCATGATGAGAGCTCCTCTGATGATC
CCTAATTCTATCCTTGCCAGAATCCCTATCTTCCTTGCCAGGAACGAGTTGTATCCTTAT
TCCTGTCAGTCCGACACTCCAGCCTTTCTGAATGTCTCCCAAGAGTCCAGGCAGACTTCT
CTCTTTGTTTGGACAGTAACTTCTGATAAGCATGCATATCAATATCGTCGTCATATAGAT
CATC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q5B0I1 |
| Definition |
sp|Q5B0I1|CWC25_EMENI Pre-mRNA-splicing factor cwc25 OS=Emericella nidulans |
| Align length |
110 |
| Score (bit) |
49.3 |
| E-value |
9.0e-06 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911854|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A05.
(484 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5B0I1|CWC25_EMENI Pre-mRNA-splicing factor cwc25 OS=Emericel... 49 9e-06
sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A OS=Ni... 44 5e-04
sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa O... 40 0.004
sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa O... 40 0.004
sp|P49756|RBM25_HUMAN Probable RNA-binding protein 25 OS=Homo sa... 40 0.007
sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 12 OS=... 39 0.012
sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=A... 39 0.012
sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio... 39 0.012
sp|Q551H4|FRAY2_DICDI Serine/threonine-protein kinase fray2 OS=D... 39 0.012
sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich 12 O... 39 0.016
sp|Q8L716|U2A2B_ARATH Splicing factor U2af large subunit B OS=Ar... 38 0.021
sp|Q6AXY7|PR38B_RAT Pre-mRNA-splicing factor 38B OS=Rattus norve... 38 0.021
sp|Q7TNC4|LC7L2_MOUSE Putative RNA-binding protein Luc7-like 2 O... 38 0.021
sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sap... 38 0.021
sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 O... 38 0.027
sp|Q54K36|Y7557_DICDI Uncharacterized protein DDB_G0287625 OS=Di... 37 0.036
sp|Q6P7Y3|PR38B_DANRE Pre-mRNA-splicing factor 38B OS=Danio reri... 37 0.036
sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculu... 37 0.036
sp|Q9N4G4|MED1_CAEEL Mediator of RNA polymerase II transcription... 37 0.047
sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musc... 37 0.047
sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=O... 37 0.061
sp|Q54WE5|PRP4B_DICDI Serine/threonine-protein kinase prpf4B OS=... 37 0.061
sp|Q6CC11|MCES_YARLI mRNA cap guanine-N7 methyltransferase OS=Ya... 37 0.061
sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein... 36 0.080
sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=A... 36 0.080
sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 O... 36 0.080
sp|Q5SUF2|CROP_MOUSE Cisplatin resistance-associated overexpress... 36 0.080
sp|P30189|TOP1_DROME DNA topoisomerase 1 OS=Drosophila melanogas... 36 0.10
sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 ... 36 0.10
sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 ... 36 0.10
>sp|Q5B0I1|CWC25_EMENI Pre-mRNA-splicing factor cwc25 OS=Emericella
nidulans GN=cwc25 PE=3 SV=1
Length = 415
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = -2
Query: 327 RDSGKDRIRDHQRS----SHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXX 160
RDSG D R H+ S S RV K R +R HDR SH++RD ++RV
Sbjct: 186 RDSGNDSHRSHRHRRRSRSRSRSPRVEKDDRRHRDREHDRRSHRDRDGERENRVERVYHS 245
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRK-RERDNDKEIDASSKRSR 13
+ R++ASP + + +R+ R++D D D +S+ SR
Sbjct: 246 SRRDHDRDERYDRA-ARRSASPRPDRRRDDRRDRDQDQDYRRDRNSRSSR 294
>sp|Q9ZR39|U2A2A_NICPL Splicing factor U2af large subunit A
OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1
Length = 555
Score = 43.5 bits (101), Expect = 5e-04
Identities = 25/98 (25%), Positives = 46/98 (46%)
Frame = -2
Query: 333 EDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXX 154
++RD G+D+ RD R+ + +R + K R+++R+ DR K+RD+ +DR
Sbjct: 39 KERDKGRDKDRDRDRNRDRDRDR-DRVKERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRE 97
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKE 40
+ +H S +R+R+ D D+E
Sbjct: 98 RERTRD---------RDEDDLHRSRDYDRRRDNDKDRE 126
Score = 33.9 bits (76), Expect = 0.40
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREEN-------RNHDRMSHKERDKSSKDR 181
DRD KDR R H+ S+R + +TR+ + R++DR ++D+ + R
Sbjct: 74 DRDGEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRSRDYDRRRDNDKDREDRRR 130
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMS---HKERD 199
+ D+D +DR + R HH +S RE R DR H+ RD
Sbjct: 66 ERDKDRHRDRDGEKDRDRHHRDRHRDRSDRRERERTRDRDEDDLHRSRD 114
>sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa
OS=Xenopus tropicalis GN=snrnp70 PE=2 SV=1
Length = 471
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Frame = -2
Query: 396 DIQKGWSVGLTGIRIQLVPGKEDRDSG----------KDRIRDHQRSSHHESERVSKSKT 247
D Q G +G+ GI ++ P +++RD KDR RD R H K +
Sbjct: 333 DAQTG-DLGIDGIELKQEPEEKNRDRDRERDREKDRDKDRDRDRDRRRSHRDRERDKDRE 391
Query: 246 REENRNHDRMSHKERDKSSK 187
R+ +R DR ++RD+ K
Sbjct: 392 RDRDRRRDRDRDRDRDRDHK 411
Score = 39.7 bits (91), Expect = 0.007
Identities = 23/106 (21%), Positives = 42/106 (39%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXXX 151
D+D KD+ +D ++ + +R +S++RE R DR K+ D+ +
Sbjct: 274 DKDKDKDKDKDKEKDKDKDRDRKRRSRSRERKRERDRDREKKEDRVEGEVPESVDVPQDD 333
Query: 150 XXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSR 13
+++ + R RE+D DK+ D R R
Sbjct: 334 AQTGDLGIDGIELKQEPEEKNRDRDRERDREKDRDKDRDRDRDRRR 379
Score = 36.2 bits (82), Expect = 0.080
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREE-NRNHDRMSHKERDK-SSKDRVXXXXX 163
+ +R +D+ R+ +RS E R S+S+ +EE R+ +R K++DK KD+
Sbjct: 232 RRERSRERDKERERRRSRSRERRRRSRSREKEERKRSRERSRDKDKDKDKDKDKEKDKDK 291
Query: 162 XXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKE 40
RK S E RKRERD D+E
Sbjct: 292 DRD--------------RKRRSRSRE-----RKRERDRDRE 313
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/139 (23%), Positives = 53/139 (38%)
Frame = -2
Query: 426 KERSLPGLLGDIQKGWSVGLTGIRIQLVPGKEDRDSGKDRIRDHQRSSHHESERVSKSKT 247
+ R L G LG ++G + IR G++D +R RD +R E +R +S+
Sbjct: 188 RPRRLGGGLGGTRRGGAD--VNIRHS---GRDDTSRYDERDRDRER----ERDRRERSRE 238
Query: 246 REENRNHDRMSHKERDKSSKDRVXXXXXXXXXXXXXXXXXXXSFIRKAASPIHESGKLNR 67
R++ R R +ER + S+ R E + R
Sbjct: 239 RDKERERRRSRSRERRRRSRSR-------------------------------EKEERKR 267
Query: 66 KRERDNDKEIDASSKRSRE 10
RER DK+ D + +E
Sbjct: 268 SRERSRDKDKDKDKDKDKE 286
Score = 31.6 bits (70), Expect = 2.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHH--ESERVSKSKTREENRNHDRMSHKERDKSSKD 184
+ DRD +DR RD R H E +R + + REE + M ++ +++S+D
Sbjct: 391 ERDRDRRRDRDRDRDRDRDHKRERDRGDRGEKREERVPDNGMVMEQAEETSQD 443
>sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa
OS=Xenopus laevis GN=snrnp70 PE=2 SV=1
Length = 471
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSK 187
G++DRD KDR RD R H K + R+ +R DR +ERDK K
Sbjct: 363 GEKDRD--KDRDRDRDRRRSHRDRDREKDRDRDRDRRRDRDRDRERDKDHK 411
Score = 38.9 bits (89), Expect = 0.012
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Frame = -2
Query: 396 DIQKGWSVGLTGIRIQLVPGKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHD-R 220
D Q G +G+ GI ++ P ++ R+ +DR RD R E+ K + ++ +R+ D R
Sbjct: 328 DAQIG-DLGIDGIELKQEPEEKSRE--RDRERDRDR------EKGEKDRDKDRDRDRDRR 378
Query: 219 MSHKERDKSSKDRVXXXXXXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKE 40
SH++RD+ KDR +R+R+RD D+E
Sbjct: 379 RSHRDRDR-EKDR--------------------------------DRDRDRRRDRDRDRE 405
Query: 39 IDASSKRSRE 10
D KR R+
Sbjct: 406 RDKDHKRERD 415
Score = 38.1 bits (87), Expect = 0.021
Identities = 34/112 (30%), Positives = 50/112 (44%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXX 157
KE R+ + R R+ +R S E+ + +TRE++++ D KE+DK +KDR
Sbjct: 242 KEPRERRRSRSRERRRKSRSR-EKEERKRTREKSKDKD----KEKDKDNKDR-------- 288
Query: 156 XXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELEA 1
RK S E RKRERD D+E K+ +EA
Sbjct: 289 --------------DRKRRSRSRE-----RKRERDRDRE-----KKEERVEA 316
Score = 33.9 bits (76), Expect = 0.40
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHH--ESERVSKSKTREENRNHDRMSHKERDKSSKD 184
DRD +DR RD +R H E +R +S+ REE + M ++ +++S+D
Sbjct: 393 DRDRRRDRDRDRERDKDHKRERDRGDRSEKREERVPDNGMVMEQAEETSQD 443
>sp|P49756|RBM25_HUMAN Probable RNA-binding protein 25 OS=Homo
sapiens GN=RBM25 PE=1 SV=2
Length = 784
Score = 39.7 bits (91), Expect = 0.007
Identities = 28/107 (26%), Positives = 46/107 (42%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXXX 151
DRD +DR RD +RSS +R S++RE++R+ +R +ER+
Sbjct: 301 DRDRERDRDRDRERSSDRNKDR---SRSREKSRDRERERERERE---------------- 341
Query: 150 XXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R+ + R+RER+ ++E + KR RE
Sbjct: 342 -------------REREREREREREREREREREREREREKDKKRDRE 375
Score = 33.5 bits (75), Expect = 0.52
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXX 160
GK++++ + +R E ER + + RE R +R KER++ ++R
Sbjct: 237 GKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERE-RERDRDRDRT 295
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
R+ +S ++ +R RE+ D+E + +R RE E
Sbjct: 296 KERDRDRDRERDRDRDRERSSDRNKDR--SRSREKSRDRERERERERERERE 345
>sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 12
OS=Rattus norvegicus GN=Sfrs12 PE=1 SV=1
Length = 494
Score = 38.9 bits (89), Expect = 0.012
Identities = 25/110 (22%), Positives = 46/110 (41%)
Frame = -2
Query: 333 EDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXX 154
+ R S K R + S H S ++S++R+++R + HK+R KS + R
Sbjct: 202 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRARSKSPHKKRSKSRERRKSRSRSRSR 261
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
+++ + R++ER+ DKE + + RE E
Sbjct: 262 DKRKDTREK----VKERVKEREREKEKEREKEREKDKERGKNKDKDREKE 307
Score = 35.8 bits (81), Expect = 0.10
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDR 181
++D++ GK++ +D ++ HE ER K +E+ ++ D+ K+R K + ++
Sbjct: 291 EKDKERGKNKDKDREKEKDHEKER---DKEKEKEQDKDKEREKDRSKEADEK 339
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21
OS=Arabidopsis thaliana GN=RH21 PE=2 SV=1
Length = 733
Score = 38.9 bits (89), Expect = 0.012
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESER-----VSKSKTREENRNHDRMSHKERDKSSKDRVX 175
G +RD +DR RD R + ER + + R+ +R+ +R +ERD+ +DR
Sbjct: 68 GDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREP 127
Query: 174 XXXXXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDA 31
R+ E ++ + ER+ +KE+DA
Sbjct: 128 DRRNREKE-------------REEEVKAREKARVEKLVEREKEKELDA 162
>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio
GN=traf3ip1 PE=2 SV=1
Length = 629
Score = 38.9 bits (89), Expect = 0.012
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKS---SKDRVXXXX 166
+E + KDR RD +RS +K + R+++++ DR K R+K KDR
Sbjct: 184 QESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDRNREKE 243
Query: 165 XXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
+K H+ + ++ RER+ +E + +R RE E
Sbjct: 244 RERDKDRD----------KKKERESHKDRERDKDREREKRREKEKDKERPRETE 287
>sp|Q551H4|FRAY2_DICDI Serine/threonine-protein kinase fray2
OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1
Length = 1028
Score = 38.9 bits (89), Expect = 0.012
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTRE---ENRNHDRMSHKERDKS-SKDRVXXX 169
K DR+ +DR R ++ + S VS+ + RE NR+ DR +ER++ ++R
Sbjct: 729 KRDRERERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDRDRERERERDRDRERDRDR 788
Query: 168 XXXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELEA 1
S R +R RERD D+ D S RSR ++
Sbjct: 789 SRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRSRSRDS 844
Score = 34.3 bits (77), Expect = 0.30
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNH-DRMSHKERDKSSKDR 181
+ DRD +DR RD RS + S+ ++R+ +R+H +R + RD +K R
Sbjct: 825 ERDRDRSRDRSRDRSRSRDSD----SRDRSRDRSRSHSNRRRSRSRDSRNKSR 873
Score = 32.3 bits (72), Expect = 1.2
Identities = 27/109 (24%), Positives = 41/109 (37%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXX 157
K+ S + RD +R + +R +K+ +RN R +ERD+ ++ R
Sbjct: 719 KKSSSSSSNSKRDRERE--RDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDRDRERER 776
Query: 156 XXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
S R +R R RD D+ D S RSRE
Sbjct: 777 ERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRE 825
Score = 32.0 bits (71), Expect = 1.5
Identities = 25/107 (23%), Positives = 40/107 (37%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXXX 151
DRD +DR RD S+ + R+ +R+ R + RD S+DR
Sbjct: 811 DRDRSRDRSRDR-----------SRERDRDRSRDRSRDRSRSRDSDSRDRSRDRS----- 854
Query: 150 XXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R ++ + +R + RD + D S RSR+
Sbjct: 855 -------------RSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRD 888
>sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich 12
OS=Mus musculus GN=Sfrs12 PE=2 SV=1
Length = 494
Score = 38.5 bits (88), Expect = 0.016
Identities = 24/110 (21%), Positives = 46/110 (41%)
Frame = -2
Query: 333 EDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXX 154
+ R S K R + S H S ++S++R+++R + HK+R KS + R
Sbjct: 202 KSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSRSR 261
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
+++ + R+++R+ DKE + + RE E
Sbjct: 262 DKRKDTREK----VKERVKEKEREKEREREKDREKDKERGKNKDKDREKE 307
Score = 35.8 bits (81), Expect = 0.10
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDR 181
++D++ GK++ +D ++ HE ER K +E+ ++ D+ K+R K + ++
Sbjct: 291 EKDKERGKNKDKDREKEKDHEKER---DKEKEKEQDKDKEREKDRSKETDEK 339
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7USK2 |
| Definition |
tr|A7USK2|A7USK2_ANOGA AGAP000003-PA (Fragment) OS=Anopheles gambiae |
| Align length |
111 |
| Score (bit) |
48.9 |
| E-value |
0.0001 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911854|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A05.
(484 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7USK2|A7USK2_ANOGA AGAP000003-PA (Fragment) OS=Anopheles gam... 49 1e-04
tr|Q7QH57|Q7QH57_ANOGA AGAP004078-PA OS=Anopheles gambiae GN=AGA... 47 6e-04
tr|Q2GW32|Q2GW32_CHAGB Putative uncharacterized protein OS=Chaet... 45 0.002
tr|Q55G70|Q55G70_DICDI Initiation factor eIF-4 gamma middle doma... 44 0.003
tr|A7US43|A7US43_ANOGA AGAP011217-PA OS=Anopheles gambiae GN=AGA... 44 0.004
tr|B6NWP5|B6NWP5_BRAFL Putative uncharacterized protein OS=Branc... 44 0.005
tr|B3MZ35|B3MZ35_DROAN GF21909 OS=Drosophila ananassae GN=GF2190... 44 0.005
tr|Q32NW5|Q32NW5_XENLA LOC397946 protein OS=Xenopus laevis GN=sn... 43 0.007
tr|Q9VKD8|Q9VKD8_DROME CG6686, isoform B OS=Drosophila melanogas... 43 0.009
tr|Q95TU2|Q95TU2_DROME CG6686, isoform A OS=Drosophila melanogas... 43 0.009
tr|Q8I5S6|Q8I5S6_PLAF7 Eukaryotic translation initiation factor ... 42 0.012
tr|B4Q3B7|B4Q3B7_DROSI GD22147 OS=Drosophila simulans GN=GD22147... 42 0.012
tr|B4IE36|B4IE36_DROSE GM26484 OS=Drosophila sechellia GN=GM2648... 42 0.012
tr|A0DF90|A0DF90_PARTE Chromosome undetermined scaffold_49, whol... 42 0.012
tr|A7P8T9|A7P8T9_VITVI Chromosome chr3 scaffold_8, whole genome ... 39 0.012
tr|A9TSN9|A9TSN9_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.015
tr|A5C811|A5C811_VITVI Putative uncharacterized protein OS=Vitis... 42 0.015
tr|Q179Y7|Q179Y7_AEDAE Putative uncharacterized protein OS=Aedes... 42 0.015
tr|B4QWJ8|B4QWJ8_DROSI GD18627 OS=Drosophila simulans GN=GD18627... 42 0.015
tr|A8Q3Q3|A8Q3Q3_BRUMA Putative uncharacterized protein OS=Brugi... 42 0.015
tr|B6A9H5|B6A9H5_9CRYT RNA recognition motif. family protein OS=... 42 0.020
tr|Q54XF1|Q54XF1_DICDI Putative uncharacterized protein OS=Dicty... 41 0.026
tr|A5KC39|A5KC39_PLAVI Putative uncharacterized protein OS=Plasm... 41 0.026
tr|A5D6T9|A5D6T9_DANRE Putative uncharacterized protein OS=Danio... 41 0.033
tr|A1L1N4|A1L1N4_DANRE Zgc:158165 OS=Danio rerio GN=zgc:158165 P... 41 0.033
tr|Q5R4K2|Q5R4K2_PONAB Putative uncharacterized protein DKFZp459... 41 0.033
tr|Q16J99|Q16J99_AEDAE Putative uncharacterized protein OS=Aedes... 41 0.033
tr|B6CB12|B6CB12_CRYHO Hydroxyproline-rich glycoprotein (Fragmen... 41 0.033
tr|B4L3A4|B4L3A4_DROMO GI15512 OS=Drosophila mojavensis GN=GI155... 41 0.033
tr|B6QRX1|B6QRX1_PENMA DEAD/DEAH box RNA helicase OS=Penicillium... 41 0.033
>tr|A7USK2|A7USK2_ANOGA AGAP000003-PA (Fragment) OS=Anopheles
gambiae GN=AGAP000003 PE=4 SV=1
Length = 251
Score = 48.9 bits (115), Expect = 1e-04
Identities = 26/111 (23%), Positives = 53/111 (47%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXX 157
+ +R+S ++R R+ +R E E +++ R+ R DR S +ERD+ S+ +
Sbjct: 20 ERERESERERARERERERERERE-TERARERQRGRERDRESERERDRESEREINHRATST 78
Query: 156 XXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
I +H+ G+ R+R+R+ +++ D ++R R+ E
Sbjct: 79 LP------------IAALGPSLHQDGETERQRDRETERQRDRETERQRDRE 117
>tr|Q7QH57|Q7QH57_ANOGA AGAP004078-PA OS=Anopheles gambiae
GN=AGAP004078 PE=3 SV=4
Length = 969
Score = 46.6 bits (109), Expect = 6e-04
Identities = 31/108 (28%), Positives = 46/108 (42%)
Frame = -2
Query: 333 EDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXX 154
+DRD KD+ RD +SS H S S S + ++ D+ H S+KD+
Sbjct: 54 KDRDREKDKNRDKHKSSSHSSSSKSGSSSSKDKEKSDKEKHSSSSSSNKDKEKS------ 107
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
++S H+S K + ++R DKE D RSRE
Sbjct: 108 --------------HHSSSSTHKSSKSD--KDRSKDKERDKDKHRSRE 139
>tr|Q2GW32|Q2GW32_CHAGB Putative uncharacterized protein OS=Chaetomium
globosum GN=CHGG_07822 PE=4 SV=1
Length = 888
Score = 44.7 bits (104), Expect = 0.002
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDK-SSKDRVXXXXXX 160
+ DR +DR RD +R + S S+ + R+ +R+ DR ++RD+ +DR
Sbjct: 794 RRDRSRDRDRARDDRRDTRRRSRSRSRDRERDRSRDRDRNRDRDRDRDQDRDR------- 846
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSR 13
S R++ S + +R R+RD D++ D +RSR
Sbjct: 847 ----------DRDSHYRRSRRERSVSSRRDRDRDRDRDRDRDHGRRRSR 885
Score = 37.4 bits (85), Expect = 0.37
Identities = 27/112 (24%), Positives = 43/112 (38%)
Frame = -2
Query: 345 VPGKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXX 166
+PG DRD +DR R+ R + +R + R +R+ DR ++R S+DR
Sbjct: 749 LPGDRDRD--RDRDRERDRMDYRGGDRYDGDRDRPRDRDRDRDRDRDRRDRSRDRDRARD 806
Query: 165 XXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R + +R R RD D++ D R R+
Sbjct: 807 DRRDTRRRS---------RSRSRDRERDRSRDRDRNRDRDRDRDQDRDRDRD 849
Score = 36.6 bits (83), Expect = 0.63
Identities = 27/109 (24%), Positives = 47/109 (43%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXX 157
+ + D +D+ R +R E ER + K RE+ R +R S ++RD+S +DR
Sbjct: 218 EREEDERRDKERRERREKERERER-EREKEREKEREKERESRRDRDRS-RDR------DR 269
Query: 156 XXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
+ +P S +R R+RD D++ D + S +
Sbjct: 270 ERDRDRDRFRERGYDSYRGTPRDRSRDRDRGRDRDRDRDRDRGRRDSHD 318
Score = 34.7 bits (78), Expect = 2.4
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -2
Query: 336 KEDRDSGKDRI-RDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXX 160
K DR + R RD RS +ER +S++R DR + R++ +DR
Sbjct: 568 KRDRSRSRRRDPRDRSRSPRQRTERRDRSRSRLRFGRRDRSRSRSRNRDRRDR------- 620
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R+ + + + +R R+RD D++ D + ++ R+
Sbjct: 621 ----------------RERSRSRARTDQRDRSRDRDRDRDRDQTREKDRD 654
Score = 33.1 bits (74), Expect = 7.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKS------KTREENRNHDRMSHKERDKS 193
DRD +D+ RD R SH+ R +S + R+ +R+ DR + R +S
Sbjct: 835 DRDRDRDQDRDRDRDSHYRRSRRERSVSSRRDRDRDRDRDRDRDHGRRRSRS 886
>tr|Q55G70|Q55G70_DICDI Initiation factor eIF-4 gamma middle
domain-containing protein OS=Dictyostelium discoideum
GN=DDB_0189551 PE=4 SV=1
Length = 925
Score = 44.3 bits (103), Expect = 0.003
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERV-SKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXX 154
DRD ++R RD R H+ +R + K RE +R+ DR +KERD+ +DR
Sbjct: 92 DRDHDRNRDRDRNRDRDHDRDRDREREKDRERDRDRDRYGNKERDRD-RDRERDRD---- 146
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R+ + R+RERD D+ D S+ R R+
Sbjct: 147 --------------RERDREREREKERERERERDRDRYGDRSTSRDRK 180
Score = 39.3 bits (90), Expect = 0.097
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKS-SKDRVXXXXXXXX 154
+R + R RD R+ + K RE +R+HDR ++RD+ ++DR
Sbjct: 41 ERSKSRSRSRDRDRNRYDRDRERDLEKERERDRDHDRNRDRDRDRDRNRDRDRDHDRNRD 100
Query: 153 XXXXXXXXXXXSFIRKAASPIHESGKL----NRKRERDNDKEIDASSKRSRELE 4
R+ N++R+RD D+E D +R RE E
Sbjct: 101 RDRNRDRDHDRDRDREREKDRERDRDRDRYGNKERDRDRDRERDRDRERDRERE 154
Score = 38.5 bits (88), Expect = 0.17
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKD 184
G ++RD +DR RD R E ER K + RE R+ DR + + KD
Sbjct: 131 GNKERDRDRDRERDRDRERDRERER-EKERERERERDRDRYGDRSTSRDRKD 181
Score = 34.7 bits (78), Expect = 2.4
Identities = 23/103 (22%), Positives = 40/103 (38%)
Frame = -2
Query: 318 GKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXXXXXXX 139
G+D D +R ++ +KSK RE +++ R ++R++ +DR
Sbjct: 16 GRDSEYDSRRERDYKDSYDNKSKDRERSKSRSRSRDRDRNRYDRDRERDLEKERERDRDH 75
Query: 138 XXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRE 10
R NR R+R+ D++ D R RE
Sbjct: 76 DRNRDRDRDRDRNRDRDRDHDRNRDRDRNRDRDHDRDRDRERE 118
>tr|A7US43|A7US43_ANOGA AGAP011217-PA OS=Anopheles gambiae
GN=AGAP011217 PE=4 SV=1
Length = 1241
Score = 43.9 bits (102), Expect = 0.004
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKS-SKDRVXXXXXX 160
+ DR+ KDR ++ +R H E + + +E+ R ++ +ER+K +++V
Sbjct: 728 QRDREREKDRNKEKERGDHAEHHDRDRDRRKEKEREKEKEKEREREKEREREKVREKERE 787
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
+ E G+ +R+RE+D DKE D ++ RE E
Sbjct: 788 KERLRDREK-------ERDKEKDRERGEKDREREKDRDKEKDRDMEKDRERE 832
Score = 33.9 bits (76), Expect = 4.1
Identities = 26/112 (23%), Positives = 48/112 (42%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXX 160
G++DR+ KDR ++ R + ER K + +E + ++ KER+K +DR
Sbjct: 807 GEKDREREKDRDKEKDRDMEKDRER-EKEREKEREKEREKEREKEREK-ERDR------- 857
Query: 159 XXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
+K + + +RK++RD K K+ +E+E
Sbjct: 858 ------EKDKDGKEVSKKKTRDSSDEDRRDRKKDRDKKKR-----KKEKEVE 898
>tr|B6NWP5|B6NWP5_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_238026 PE=4 SV=1
Length = 751
Score = 43.5 bits (101), Expect = 0.005
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDR 181
K+D+D + R R+ +R +S S+S+++E R+ DR ++RDK K+R
Sbjct: 28 KKDKDRSRSRSRERKREKKEKSRSRSRSRSKERKRDKDRHRERKRDKEGKER 79
>tr|B3MZ35|B3MZ35_DROAN GF21909 OS=Drosophila ananassae GN=GF21909
PE=4 SV=1
Length = 608
Score = 43.5 bits (101), Expect = 0.005
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Frame = -2
Query: 336 KEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKS-SKDRVXXXXXX 160
+ DRD +DR RD +R E +R + + R+ +R+ DR +ER++ +DR
Sbjct: 134 ERDRDRERDRDRDRERDRDRERDR-DRDRDRDRDRDRDRDRDRERERERDRDREREKRDL 192
Query: 159 XXXXXXXXXXXXXSFIRKAASPIH--------ESGKLNRKRERDNDKEIDASSKRSRE 10
R S + E G +R+RERD D+E D R R+
Sbjct: 193 ERSRDREHNKSDHRHYRTKESSSNSGHRERERERGDRDRERERDRDRERDRERDRDRD 250
Score = 38.1 bits (87), Expect = 0.22
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSK 187
DRD +DR R + S HH S + K + +E + NHDR + D S+
Sbjct: 248 DRDRDRDRRRSDKSSRHHHSGK-DKEQRKEHHHNHDRSRRRRGDSRSR 294
>tr|Q32NW5|Q32NW5_XENLA LOC397946 protein OS=Xenopus laevis
GN=snrnp70 PE=2 SV=1
Length = 471
Score = 43.1 bits (100), Expect = 0.007
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -2
Query: 339 GKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSK 187
G++DRD +DR RD +RS + + R+ +R DR +ERDK K
Sbjct: 361 GEKDRDKDRDRDRDRRRSHRDRDREKDRDRDRDRDRRRDRDRDRERDKDHK 411
Score = 35.8 bits (81), Expect = 1.1
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 1/130 (0%)
Frame = -2
Query: 396 DIQKGWSVGLTGIRIQLVPGKEDRDSGKDRIRDHQRSSHHESERVSKSKTREENRNH-DR 220
D Q G +G+ GI ++ +E + ++R RD R + + + R+ R+H DR
Sbjct: 328 DAQIG-DLGIDGIELK----QEPEEKSRERDRDRDREKGEKDRDKDRDRDRDRRRSHRDR 382
Query: 219 MSHKERDKSSKDRVXXXXXXXXXXXXXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKE 40
K+RD+ +DR +R+R+RD D+E
Sbjct: 383 DREKDRDR-DRDR------------------------------------DRRRDRDRDRE 405
Query: 39 IDASSKRSRE 10
D KR R+
Sbjct: 406 RDKDHKRERD 415
Score = 33.9 bits (76), Expect = 4.1
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -2
Query: 330 DRDSGKDRIRDHQRSSHH--ESERVSKSKTREENRNHDRMSHKERDKSSKD 184
DRD +DR RD +R H E +R +S+ REE + M ++ +++S+D
Sbjct: 393 DRDRRRDRDRDRERDKDHKRERDRGDRSEKREERVPDNGMVMEQAEETSQD 443
>tr|Q9VKD8|Q9VKD8_DROME CG6686, isoform B OS=Drosophila melanogaster
GN=CG6686 PE=1 SV=1
Length = 964
Score = 42.7 bits (99), Expect = 0.009
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = -2
Query: 333 EDRDSGKDR--IRDHQRSSHHESER-VSKSKTREENRNHDRMSHKERDKSSKDRVXXXXX 163
++RDSG+DR +R+ +R E ER + K RE R +R+ +E + +++
Sbjct: 113 KERDSGRDRELLRERERERDRERERDRDREKEREREREKERLREREEREREREKERIRER 172
Query: 162 XXXXXXXXXXXXXXSFIRKAASP----IHESGKLNRKRERDNDKEIDASSKRSRELE 4
+R+ +P I + + +RER+ ++E DA + RE E
Sbjct: 173 EKERLRERERERERERVRELTAPPPPQISKHAEYESRREREIERERDARKRSGRERE 229
Score = 34.3 bits (77), Expect = 3.1
Identities = 28/107 (26%), Positives = 40/107 (37%)
Frame = -2
Query: 324 DSGKDRIRDHQRSSHHESERVSKSKTREENRNHDRMSHKERDKSSKDRVXXXXXXXXXXX 145
D R R H+ H E R K +E R ++ +S +E D S D V
Sbjct: 41 DDSSSRHRHHKHKKHKE-HRHKHHKQKERERANEVISLEESDSDSSDCVEVPVQAQVQAQ 99
Query: 144 XXXXXXXXSFIRKAASPIHESGKLNRKRERDNDKEIDASSKRSRELE 4
S R +L R+RER+ D+E + R +E E
Sbjct: 100 AKLRDARESSNRDKERDSGRDRELLRERERERDRERERDRDREKERE 146
>tr|Q95TU2|Q95TU2_DROME CG6686, isoform A OS=Drosophila melanogaster
GN=CG6686 PE=2 SV=1
Length = 970
Score = 42.7 bits (99), Expect = 0.009
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = -2
Query: 333 EDRDSGKDR--IRDHQRSSHHESER-VSKSKTREENRNHDRMSHKERDKSSKDRVXXXXX 163
++RDSG+DR +R+ +R E ER + K RE R +R+ +E + +++
Sbjct: 119 KERDSGRDRELLRERERERDRERERDRDREKEREREREKERLREREEREREREKERIRER 178
Query: 162 XXXXXXXXXXXXXXSFIRKAASP----IHESGKLNRKRERDNDKEIDASSKRSRELE 4
+R+ +P I + + +RER+ ++E DA + RE E
Sbjct: 179 EKERLRERERERERERVRELTAPPPPQISKHAEYESRREREIERERDARKRSGRERE 235
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