BP911855
Clone id YMU001_000010_A06
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGCTTCGTAGACATCATCATTTACACAAAAGGGTATAACTTTTACTTTATTTTTTAATT
TTTTGGGATAGAGCCGGCAAGCCGGGAAGAGGGTATAACCATGGATATTGGTTGTGCCTT
TGTGGTCTCTGGCTTTTCTTTGAGTGGTCACTTTACCTTTGCTTATAGCAATTGGTGTTA
TAAAATATCTTCTTTGCTCCATAATACAACAGATTATATTGACTAATGAACCTCAGCTTT
CTACAGGCCTTGTATCTGTAAGATGAAAATTTGGAAAACTCCTCAAGATACTACACCATG
GGAGAGGAGACCTACAGTCACAAATGGTCCTTGGTAGGAAAGGACTGACTCCTTGGATTT
CTTCAAGTGGCAGTAACCCCTCTCTTCTATTAACATACTCTACAGCCTCTTCTGCAGTAA
CCCGGCTGCTCTGATGTACCAATCATGTAGGTTGGATTCTTTTGGCATTCTCCATATGCT
GCCCATTCACCGCAACTCTCATCCTCGTCTTTGCAATCTCCTACATCTCGCGCTGGGGAA
TC
■■Homology search results ■■ -
sp_hit_id Q19673
Definition sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 OS=Caenorhabditis elegans
Align length 24
Score (bit) 43.1
E-value 0.0009
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911855|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A06.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 OS=C... 43 9e-04
sp|Q97A95|TRI_THEVO Tricorn protease OS=Thermoplasma volcanium G... 34 0.53
sp|Q7NTL6|HLDD_CHRVO ADP-L-glycero-D-manno-heptose-6-epimerase O... 33 0.69
sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=G... 32 1.5
sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus G... 32 2.0
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 OS=C... 32 2.6
sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium sim... 31 4.5
sp|P60781|RNP3_METMP Ribonuclease P protein component 3 OS=Metha... 30 9.9
sp|P34243|HCS1_YEAST DNA polymerase alpha-associated DNA helicas... 30 9.9
sp|Q9VGB4|CP132_DROME Probable cytochrome P450 313a2 OS=Drosophi... 30 9.9

>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3
OS=Caenorhabditis elegans GN=tyr-3 PE=2 SV=5
Length = 693

Score = 43.1 bits (100), Expect = 9e-04
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -1

Query: 515 CKDEDESCGEWAAYGECQKNPTYM 444
C +E+E CG W+A GECQKNP YM
Sbjct: 472 CFNENECCGPWSAKGECQKNPVYM 495



Score = 34.3 bits (77), Expect = 0.40
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1

Query: 515 CKDEDESCGEWAAYGECQKNPTYM 444
C +ED+ C WA G+C+ NP YM
Sbjct: 591 CYNEDQCCPIWAQRGQCRSNPGYM 614



Score = 33.9 bits (76), Expect = 0.53
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1

Query: 518 DCKDEDESCGEWAAYGECQKNPTYM 444
+C D +C W+ GEC KNP +M
Sbjct: 515 ECSDRHTNCAMWSRSGECNKNPLWM 539


>sp|Q97A95|TRI_THEVO Tricorn protease OS=Thermoplasma volcanium
GN=tri PE=3 SV=1
Length = 1030

Score = 33.9 bits (76), Expect = 0.53
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2

Query: 226 LVNIICC--IMEQRRYFITPIAISKGKVTTQRKARDHKGTTNIHGYTLFPACRLYPKKLK 53
L N I C I++ R YFIT I + +T D K T+ H Y YP+ L
Sbjct: 188 LENHISCPVIVKDRIYFITDIDGAGNIYSTNLDGNDLKKHTDFHEY--------YPRHLN 239

Query: 52 NKVKVIPFCVNDDVY 8
K I F + D+Y
Sbjct: 240 TDGKTIVFSMGGDIY 254


>sp|Q7NTL6|HLDD_CHRVO ADP-L-glycero-D-manno-heptose-6-epimerase
OS=Chromobacterium violaceum GN=hldD PE=3 SV=1
Length = 333

Score = 33.5 bits (75), Expect = 0.69
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -2

Query: 208 CIMEQRRYFITPIAISKGKVTTQRKARDHKGTTNIHGYTLFPACRLYPKKLKNKVK 41
C E+ ++ A + GK T ++ R H+G N++GY+ F L+ + L+ ++K
Sbjct: 105 CQHEEIQFLYASSAATYGKGTVFKEERQHEGPLNVYGYSKF----LFDQVLRQRIK 156


>sp|O08742|GPV_MOUSE Platelet glycoprotein V OS=Mus musculus GN=Gp5
PE=2 SV=1
Length = 567

Score = 32.3 bits (72), Expect = 1.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1

Query: 100 HGYWLCLCGLWLFFEW 147
H WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWRFLQW 435


>sp|O08770|GPV_RAT Platelet glycoprotein V OS=Rattus norvegicus
GN=Gp5 PE=2 SV=1
Length = 567

Score = 32.0 bits (71), Expect = 2.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1

Query: 100 HGYWLCLCGLWLFFEW 147
H WLC CGLW F +W
Sbjct: 420 HNPWLCDCGLWPFLQW 435


>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1
OS=Caenorhabditis elegans GN=tyr-1 PE=1 SV=2
Length = 601

Score = 31.6 bits (70), Expect = 2.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1

Query: 518 DCKDEDESCGEWAAYGECQKNPTYM 444
+C +ED C +W+ EC+ N YM
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYM 503


>sp|O03199|ATP8_CERSI ATP synthase protein 8 OS=Ceratotherium simum
GN=MT-ATP8 PE=3 SV=1
Length = 68

Score = 30.8 bits (68), Expect = 4.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2

Query: 167 SNWCYKISSLLHNTTDYID**TSAFYRPCICKMKIWKTPQDTTPWERRPTVTNGP 331
S W I S++ S + P ++K+ KTP TTPWE + T T P
Sbjct: 7 STWSITIVSMIITLFIMFQLKLSKYSYPSSPELKLTKTPTHTTPWESKWTKTYLP 61


>sp|P60781|RNP3_METMP Ribonuclease P protein component 3
OS=Methanococcus maripaludis GN=rnp3 PE=3 SV=1
Length = 232

Score = 29.6 bits (65), Expect = 9.9
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3

Query: 240 STGLVSVR*KFGKLLKILHHGRGDL----QSQMVLGRKGLTPWISSSGSN 377
ST V+V FG LLK ++ R + Q + L +K TP + SSG+N
Sbjct: 127 STNRVAVELNFGNLLKSKNYDRSKILWAFQRNLKLSKKYDTPVVISSGAN 176


>sp|P34243|HCS1_YEAST DNA polymerase alpha-associated DNA helicase A
OS=Saccharomyces cerevisiae GN=HCS1 PE=1 SV=1
Length = 683

Score = 29.6 bits (65), Expect = 9.9
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = -2

Query: 295 CSILRSFPNFHLTDTRPVES*GSLVNIIC---CIMEQRRYFITPIAISKGKVTTQRKARD 125
CS+ R PNF L DT ++ + C I Q ++ +A ++ K D
Sbjct: 377 CSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTED 436

Query: 124 HKGTTNIHGYTLFP-ACRLYPKKLKNKVKVIPFCVNDDVYE 5
K + TLF +++PK+ K + + +N + E
Sbjct: 437 DKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIME 477


>sp|Q9VGB4|CP132_DROME Probable cytochrome P450 313a2 OS=Drosophila
melanogaster GN=Cyp313a2 PE=3 SV=3
Length = 493

Score = 29.6 bits (65), Expect = 9.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2

Query: 172 IAISKGKVTTQRKARDHKGTTNIHGYTLFPACRLYPKKLKNKVKVIPFCVN 20
+ IS+GK++++ D G+T + P K+ KV PFC+N
Sbjct: 48 LIISRGKMSSRTTYMDKHGSTYMAWIGTTPIVITRDPKIAEKVLTSPFCIN 98


tr_hit_id A9TA62
Definition tr|A9TA62|A9TA62_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 42
Score (bit) 63.2
E-value 9.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911855|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A06.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TA62|A9TA62_PHYPA Predicted protein (Fragment) OS=Physcomit... 63 9e-09
tr|B4FLB6|B4FLB6_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 59 1e-07
tr|Q6AVM9|Q6AVM9_ORYSJ Os05g0489100 protein OS=Oryza sativa subs... 58 4e-07
tr|A2Y5Z3|A2Y5Z3_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07
tr|Q8RWK0|Q8RWK0_ARATH Putative uncharacterized protein At5g1890... 57 6e-07
tr|Q8LAN3|Q8LAN3_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 57 6e-07
tr|A9NS85|A9NS85_PICSI Putative uncharacterized protein OS=Picea... 57 6e-07
tr|Q9M0K1|Q9M0K1_ARATH Putative uncharacterized protein AT4g2560... 56 1e-06
tr|Q8GXT7|Q8GXT7_ARATH Putative uncharacterized protein At4g2560... 56 1e-06
tr|O65602|O65602_ARATH Putative uncharacterized protein M7J2.30 ... 56 1e-06
tr|B6ZN57|B6ZN57_TOBAC Type 2 proly 4-hydroxylase OS=Nicotiana t... 56 1e-06
tr|A7PMI3|A7PMI3_VITVI Chromosome chr14 scaffold_21, whole genom... 55 2e-06
tr|A7NWB3|A7NWB3_VITVI Chromosome chr5 scaffold_2, whole genome ... 55 2e-06
tr|B8APC3|B8APC3_ORYSI Putative uncharacterized protein OS=Oryza... 55 3e-06
tr|A7QG22|A7QG22_VITVI Chromosome undetermined scaffold_91, whol... 55 3e-06
tr|Q338D2|Q338D2_ORYSJ Prolyl 4-hydroxylase, putative, expressed... 54 4e-06
tr|Q109P7|Q109P7_ORYSJ Os10g0413500 protein OS=Oryza sativa subs... 54 4e-06
tr|B8BGT2|B8BGT2_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06
tr|A3C4P9|A3C4P9_ORYSJ Putative uncharacterized protein OS=Oryza... 54 4e-06
tr|A1YAC2|A1YAC2_DIACA Prolyl 4-hydroxylase OS=Dianthus caryophy... 54 5e-06
tr|Q5GAV6|Q5GAV6_MAIZE Putative uncharacterized protein OS=Zea m... 54 7e-06
tr|Q10RA7|Q10RA7_ORYSJ Prolyl 4-hydroxylase, putative, expressed... 54 7e-06
tr|Q0DUV1|Q0DUV1_ORYSJ Os03g0166200 protein OS=Oryza sativa subs... 54 7e-06
tr|A2XCX2|A2XCX2_ORYSI Putative uncharacterized protein OS=Oryza... 53 9e-06
tr|Q9SQT3|Q9SQT3_ARATH F24P17.24 protein OS=Arabidopsis thaliana... 53 1e-05
tr|Q8L8T9|Q8L8T9_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 53 1e-05
tr|Q0WP28|Q0WP28_ARATH Putative uncharacterized protein At3g0630... 53 1e-05
tr|B6TED5|B6TED5_MAIZE Prolyl 4-hydroxylase OS=Zea mays PE=2 SV=1 53 1e-05
tr|B4FGT5|B4FGT5_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05
tr|Q9LSI6|Q9LSI6_ARATH Prolyl 4-hydroxylase alpha subunit-like p... 52 2e-05

>tr|A9TA62|A9TA62_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_16503 PE=4 SV=1
Length = 263

Score = 63.2 bits (152), Expect = 9e-09
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = -1

Query: 542 DSPARDVGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
+ P G C +E +SC EWAAYGECQKNP YM+GT E PGY
Sbjct: 214 EKPRPKNGACVNEVDSCEEWAAYGECQKNPAYMVGTKEWPGY 255


>tr|B4FLB6|B4FLB6_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1
Length = 308

Score = 59.3 bits (142), Expect = 1e-07
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
G+C DE+ESC +WAA GEC KNP YM+GT+ PGY
Sbjct: 266 GNCTDENESCAKWAALGECIKNPEYMVGTTALPGY 300


>tr|Q6AVM9|Q6AVM9_ORYSJ Os05g0489100 protein OS=Oryza sativa subsp.
japonica GN=OJ1119_H02.14 PE=2 SV=1
Length = 319

Score = 57.8 bits (138), Expect = 4e-07
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
G+C D++ESC +WAA GEC KNP YMIGT+ PGY
Sbjct: 277 GNCTDDNESCEKWAALGECIKNPEYMIGTAALPGY 311


>tr|A2Y5Z3|A2Y5Z3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20415 PE=4 SV=1
Length = 319

Score = 57.8 bits (138), Expect = 4e-07
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
G+C D++ESC +WAA GEC KNP YMIGT+ PGY
Sbjct: 277 GNCTDDNESCEKWAALGECIKNPEYMIGTAALPGY 311


>tr|Q8RWK0|Q8RWK0_ARATH Putative uncharacterized protein At5g18900
OS=Arabidopsis thaliana GN=At5g18900 PE=2 SV=1
Length = 298

Score = 57.0 bits (136), Expect = 6e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
G+C D +ESC WA GEC KNP YM+GT+E PGY
Sbjct: 256 GNCTDMNESCERWAVLGECTKNPEYMVGTTELPGY 290


>tr|Q8LAN3|Q8LAN3_ARATH Prolyl 4-hydroxylase alpha subunit-like
protein OS=Arabidopsis thaliana PE=2 SV=1
Length = 298

Score = 57.0 bits (136), Expect = 6e-07
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPGY 417
G+C D +ESC WA GEC KNP YM+GT+E PGY
Sbjct: 256 GNCTDMNESCERWAVLGECTKNPEYMVGTTELPGY 290


>tr|A9NS85|A9NS85_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 208

Score = 57.0 bits (136), Expect = 6e-07
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = -1

Query: 542 DSPARDVGDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 420
D P + +C D++ CGEWAAYGEC NP YM+G+ + PG
Sbjct: 159 DKPRQSSDNCVDQNPRCGEWAAYGECNNNPIYMLGSPDLPG 199


>tr|Q9M0K1|Q9M0K1_ARATH Putative uncharacterized protein AT4g25600
(Fragment) OS=Arabidopsis thaliana GN=AT4g25600 PE=4
SV=1
Length = 315

Score = 55.8 bits (133), Expect = 1e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 420
G+C DEDE+CG WA GEC+KNP YMIG+ + G
Sbjct: 273 GECSDEDENCGRWAKLGECKKNPVYMIGSPDYYG 306


>tr|Q8GXT7|Q8GXT7_ARATH Putative uncharacterized protein
At4g25600/M7J2_30 (Putative uncharacterized protein
At4g25600) OS=Arabidopsis thaliana GN=At4g25600/M7J2_30
PE=2 SV=1
Length = 291

Score = 55.8 bits (133), Expect = 1e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 420
G+C DEDE+CG WA GEC+KNP YMIG+ + G
Sbjct: 249 GECSDEDENCGRWAKLGECKKNPVYMIGSPDYYG 282


>tr|O65602|O65602_ARATH Putative uncharacterized protein M7J2.30
OS=Arabidopsis thaliana GN=M7J2.30 PE=4 SV=1
Length = 316

Score = 55.8 bits (133), Expect = 1e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -1

Query: 521 GDCKDEDESCGEWAAYGECQKNPTYMIGTSEQPG 420
G+C DEDE+CG WA GEC+KNP YMIG+ + G
Sbjct: 274 GECSDEDENCGRWAKLGECKKNPVYMIGSPDYYG 307