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NBDC - LSDB Archive
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BP911856
Clone id YMU001_000010_A07
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACTGGAAGAATTCGCGGCCGCGAATTAGCAGAAGTCGGTAAGCTTGAGCCAGTTGGCTG
CTGTGAATTAGGATTTATTTCCATACGGCCTCAGTACTATACTGTAATTGCAAATAACGT
TGATATTCTGGACTTTCCGGGAATAAAGCACGTAACTAGTTTACTAAAACTTGCATTCCC
ATTTTATCCGCATTGGCTCGAGCCACTCTTAAACCAATCCAAAGTGCGCGTGCACCCTGA
TTTTTCTGCCCCACTGTACGAACATATTGTTCATACATTTGTGTAGCAGCCGGAATCTGC
TGCTGCAAATAAAAAATTTCTGCTAACTCTAACATTGAAATGTAAGAGTCGCGGTTAGCA
AGAAGTGCTTGTTTGAATGTTTATGCAGCACTCGCAATATCGCCTAGTTTTAAATAAATT
CGCCCCAGATTTTCTAAAGCCTGGTAACGTTGATCATAGCCTAATGTTGCACCAGCAATA
CGAAATTGCTCAATA
■■Homology search results ■■ -
sp_hit_id O94556
Definition sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe
Align length 78
Score (bit) 37.0
E-value 0.043
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911856|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A07.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Sch...    37   0.043
sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-...    33   0.62 
sp|Q50325|Y605_MYCPN Uncharacterized protein MG406 homolog OS=My...    32   1.8  
sp|P0AB58|YCIM_ECOLI Uncharacterized protein yciM OS=Escherichia...    31   3.1  
sp|P0AB59|YCIM_ECOL6 Uncharacterized protein yciM OS=Escherichia...    31   3.1  
sp|P0AB60|YCIM_ECO57 Uncharacterized protein yciM OS=Escherichia...    31   3.1  
sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing pr...    30   4.0  
sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide N-...    30   5.2  
sp|B0BNG0|TTC35_RAT Tetratricopeptide repeat protein 35 OS=Rattu...    30   6.8  
sp|Q5R882|TTC35_PONAB Tetratricopeptide repeat protein 35 OS=Pon...    30   6.8  
sp|Q9CRD2|TTC35_MOUSE Tetratricopeptide repeat protein 35 OS=Mus...    30   6.8  
sp|Q15006|TTC35_HUMAN Tetratricopeptide repeat protein 35 OS=Hom...    30   6.8  
sp|Q8RVB2|SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide N-...    30   6.8  
sp|Q6TGY8|TTC35_DANRE Tetratricopeptide repeat protein 35 OS=Dan...    29   8.9  
sp|O82422|SPY_HORVU Probable UDP-N-acetylglucosamine--peptide N-...    29   8.9  
sp|P0AFB4|NLPI_SHIFL Lipoprotein nlpI OS=Shigella flexneri GN=nl...    29   8.9  
sp|P0AFB1|NLPI_ECOLI Lipoprotein nlpI OS=Escherichia coli (strai...    29   8.9  
sp|P0AFB2|NLPI_ECOL6 Lipoprotein nlpI OS=Escherichia coli O6 GN=...    29   8.9  
sp|P0AFB3|NLPI_ECO57 Lipoprotein nlpI OS=Escherichia coli O157:H...    29   8.9  

>sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8
           OS=Schizosaccharomyces pombe GN=cut23 PE=1 SV=2
          Length = 565

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = -2

Query: 458 FRIAGATLGYDQR-YQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFY 282
           F+ A A   YDQR +QAL   G  Y K+     A  ++K+ALL ++ +   ++ L  ++ 
Sbjct: 429 FQRATALRPYDQRMWQAL---GNCYEKIDRPQEAIKSYKRALLGSQTNSSILVRLGNLYE 485

Query: 281 LQQQIPAATQMYEQYVRT 228
             Q + +A  MY+Q ++T
Sbjct: 486 ELQDLNSAASMYKQCIKT 503


>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SEC OS=Arabidopsis
           thaliana GN=SEC PE=2 SV=1
          Length = 977

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 404 NLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFYLQQQIPAATQMYEQ 240
           NLG +Y  LG    A   ++ AL    +S ++   +A I+Y Q Q+  A + Y+Q
Sbjct: 262 NLGNVYKALGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQ 316


>sp|Q50325|Y605_MYCPN Uncharacterized protein MG406 homolog
           OS=Mycoplasma pneumoniae GN=MPN_605 PE=4 SV=1
          Length = 157

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 56  IRPQYYTVIANNVDILDFPGIKHVTSLLKLAFPFYPHWLEPLLNQSKVRVHPDF 217
           IRPQY+ VIA  +  L FP +K V S   L   ++   L   LN+  V     F
Sbjct: 101 IRPQYFHVIATIISTLFFPLLKIVISFAWLPLEYHCKNLISKLNKKHVTTGDSF 154


>sp|P0AB58|YCIM_ECOLI Uncharacterized protein yciM OS=Escherichia
           coli (strain K12) GN=yciM PE=4 SV=1
          Length = 389

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISML-ELAE 291
           I Q  +  A+L Y+QR  A++ LGR Y+  G    A   F Q L    D  I  L +L +
Sbjct: 91  IHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQ-LTDETDFRIGALQQLLQ 149

Query: 290 IFYLQQQIPAATQMYEQYVR 231
           I+    +   A  + E+ V+
Sbjct: 150 IYQATSEWQKAIDVAERLVK 169


>sp|P0AB59|YCIM_ECOL6 Uncharacterized protein yciM OS=Escherichia
           coli O6 GN=yciM PE=4 SV=1
          Length = 389

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISML-ELAE 291
           I Q  +  A+L Y+QR  A++ LGR Y+  G    A   F Q L    D  I  L +L +
Sbjct: 91  IHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQ-LTDETDFRIGALQQLLQ 149

Query: 290 IFYLQQQIPAATQMYEQYVR 231
           I+    +   A  + E+ V+
Sbjct: 150 IYQATSEWQKAIDVAERLVK 169


>sp|P0AB60|YCIM_ECO57 Uncharacterized protein yciM OS=Escherichia
           coli O157:H7 GN=yciM PE=4 SV=1
          Length = 389

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISML-ELAE 291
           I Q  +  A+L Y+QR  A++ LGR Y+  G    A   F Q L    D  I  L +L +
Sbjct: 91  IHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQ-LTDETDFRIGALQQLLQ 149

Query: 290 IFYLQQQIPAATQMYEQYVR 231
           I+    +   A  + E+ V+
Sbjct: 150 IYQATSEWQKAIDVAERLVK 169


>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing
           protein 1 OS=Homo sapiens GN=TMTC1 PE=2 SV=1
          Length = 774

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -2

Query: 413 ALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFYLQQQIPAATQMYEQ 240
           A+ NLGR+Y  LG+ + A   +K+AL     + I +  L  ++Y   +   A Q+Y++
Sbjct: 544 AMVNLGRLYRSLGENSMAEEWYKRALQVAHKAEI-LSPLGALYYNTGRYEEALQIYQE 600


>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
           N-acetylglucosaminyltransferase SPINDLY OS=Petunia
           hybrida GN=SPY PE=2 SV=1
          Length = 932

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = -2

Query: 416 QALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFYLQQQIPAATQMYEQY 237
           Q+L NLG +Y   G + +AA   ++A++AN     +   L  ++     I  A + YEQ 
Sbjct: 369 QSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAGNISLAIEAYEQC 428

Query: 236 VR-TVGQKNQGARALWIGLRVARANADKM 153
           ++     +N G   L     +   + DK+
Sbjct: 429 LKIDPDSRNAGQNRLLAMNYINEGSDDKL 457


>sp|B0BNG0|TTC35_RAT Tetratricopeptide repeat protein 35 OS=Rattus
           norvegicus GN=Ttc35 PE=2 SV=1
          Length = 297

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/75 (21%), Positives = 35/75 (46%)
 Frame = -2

Query: 416 QALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFYLQQQIPAATQMYEQY 237
           +A   L  +Y+   D A AA   ++ ++ N  +++   + AE+ Y Q  +       + +
Sbjct: 156 EAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYF 215

Query: 236 VRTVGQKNQGARALW 192
            + +   N+  RAL+
Sbjct: 216 AQALKLNNRNMRALF 230


>sp|Q5R882|TTC35_PONAB Tetratricopeptide repeat protein 35 OS=Pongo
           abelii GN=TTC35 PE=2 SV=1
          Length = 297

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/75 (21%), Positives = 35/75 (46%)
 Frame = -2

Query: 416 QALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIFYLQQQIPAATQMYEQY 237
           +A   L  +Y+   D A AA   ++ ++ N  +++   + AE+ Y Q  +       + +
Sbjct: 156 EAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKYF 215

Query: 236 VRTVGQKNQGARALW 192
            + +   N+  RAL+
Sbjct: 216 AQALKLNNRNMRALF 230
tr_hit_id B2I3E3
Definition tr|B2I3E3|B2I3E3_ACIBC Tfp pilus assembly protein PilF OS=Acinetobacter baumannii (strain ACICU)
Align length 139
Score (bit) 265.0
E-value 9.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911856|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A07.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2I3E3|B2I3E3_ACIBC Tfp pilus assembly protein PilF OS=Acinet...   265   9e-70
tr|A3M209|A3M209_ACIBT Type 4 fimbrial biogenesis protein OS=Aci...   265   9e-70
tr|B0V4T9|B0V4T9_ACIBY Type 4 fimbrial biogenesis protein OS=Aci...   263   3e-69
tr|B7I5G5|B7I5G5_ACIBA Type IV pilus biogenesis/stability protei...   263   3e-69
tr|B7H071|B7H071_ACIBA Type IV pilus biogenesis/stability protei...   263   3e-69
tr|Q6FEM5|Q6FEM5_ACIAD Type 4 fimbrial biogenesis protein OS=Aci...   215   1e-54
tr|Q1QD20|Q1QD20_PSYCK TPR repeat OS=Psychrobacter cryohalolenti...    89   1e-16
tr|Q4FTW9|Q4FTW9_PSYA2 Possible type 4 fimbrial biogenesis prote...    82   2e-14
tr|Q886Z2|Q886Z2_PSESM Type IV pilus biogenesis protein PilF OS=...    69   9e-11
tr|A0YCF9|A0YCF9_9GAMM Type 4 fimbrial biogenesis protein PilF O...    69   1e-10
tr|Q4ZX25|Q4ZX25_PSEU2 TPR repeat:TPR repeat OS=Pseudomonas syri...    68   2e-10
tr|Q1IEI3|Q1IEI3_PSEE4 Type IV pili biogenesis protein PilF OS=P...    68   2e-10
tr|Q48LZ6|Q48LZ6_PSE14 Type IV pilus biogenesis protein PilF OS=...    67   4e-10
tr|B3PDL9|B3PDL9_CELJU Type IV pilus biogenesis protein PilF OS=...    66   1e-09
tr|Q2BGS8|Q2BGS8_9GAMM Type IV pilus biogenesis protein PilF OS=...    65   1e-09
tr|B7RT18|B7RT18_9GAMM Type IV pilus biogenesis/stability protei...    65   2e-09
tr|B1JDQ4|B1JDQ4_PSEPW Type IV pilus biogenesis/stability protei...    65   2e-09
tr|B8KFJ0|B8KFJ0_9GAMM Type IV pilus biogenesis/stability protei...    64   3e-09
tr|B4X5G4|B4X5G4_9GAMM Type IV pilus biogenesis/stability protei...    64   4e-09
tr|Q02RV9|Q02RV9_PSEAB Type 4 fimbrial biogenesis protein PilF O...    62   1e-08
tr|B0KPI5|B0KPI5_PSEPG Type IV pilus biogenesis/stability protei...    62   1e-08
tr|B7UWI6|B7UWI6_PSEAE Type 4 fimbrial biogenesis protein PilF O...    62   1e-08
tr|A3LEQ6|A3LEQ6_PSEAE Type 4 fimbrial biogenesis protein PilF O...    62   1e-08
tr|A3KY70|A3KY70_PSEAE Type 4 fimbrial biogenesis protein PilF O...    62   1e-08
tr|Q3K7B4|Q3K7B4_PSEPF Type IV pilus biogenesis protein PilF OS=...    62   2e-08
tr|Q88PJ9|Q88PJ9_PSEPK Type IV pili biogenesis protein PilF OS=P...    61   2e-08
tr|Q0VND8|Q0VND8_ALCBS Type IV pili biogenesis protein PilF OS=A...    61   2e-08
tr|Q2SDW2|Q2SDW2_HAHCH Tfp pilus assembly protein PilF OS=Hahell...    61   3e-08
tr|Q4K6U7|Q4K6U7_PSEF5 Type IV pilus biogenesis protein PilF OS=...    60   4e-08
tr|A6V0V8|A6V0V8_PSEA7 Type IV pilus biogenesis/stability protei...    60   4e-08

>tr|B2I3E3|B2I3E3_ACIBC Tfp pilus assembly protein PilF
           OS=Acinetobacter baumannii (strain ACICU) GN=ACICU_00509
           PE=4 SV=1
          Length = 258

 Score =  265 bits (677), Expect = 9e-70
 Identities = 136/139 (97%), Positives = 136/139 (97%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASA  TFKQALLANRDSYISMLELAEI
Sbjct: 120 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAEKTFKQALLANRDSYISMLELAEI 179

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN LRALFPE
Sbjct: 180 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPE 239

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           SPEYQRYLQLQYSTEAVWK
Sbjct: 240 SPEYQRYLQLQYSTEAVWK 258


>tr|A3M209|A3M209_ACIBT Type 4 fimbrial biogenesis protein
           OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
           755) GN=A1S_0500 PE=4 SV=2
          Length = 258

 Score =  265 bits (677), Expect = 9e-70
 Identities = 136/139 (97%), Positives = 136/139 (97%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASA  TFKQALLANRDSYISMLELAEI
Sbjct: 120 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAEKTFKQALLANRDSYISMLELAEI 179

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN LRALFPE
Sbjct: 180 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPE 239

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           SPEYQRYLQLQYSTEAVWK
Sbjct: 240 SPEYQRYLQLQYSTEAVWK 258


>tr|B0V4T9|B0V4T9_ACIBY Type 4 fimbrial biogenesis protein
           OS=Acinetobacter baumannii (strain AYE) GN=pilF PE=4
           SV=1
          Length = 266

 Score =  263 bits (672), Expect = 3e-69
 Identities = 135/139 (97%), Positives = 136/139 (97%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           IEQFRIAGATLGYDQRYQALENLGRIYLKLG+IASA  TFKQALLANRDSYISMLELAEI
Sbjct: 128 IEQFRIAGATLGYDQRYQALENLGRIYLKLGNIASAEKTFKQALLANRDSYISMLELAEI 187

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN LRALFPE
Sbjct: 188 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPE 247

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           SPEYQRYLQLQYSTEAVWK
Sbjct: 248 SPEYQRYLQLQYSTEAVWK 266


>tr|B7I5G5|B7I5G5_ACIBA Type IV pilus biogenesis/stability protein
           PilW OS=Acinetobacter baumannii AB0057 GN=pilF PE=4 SV=1
          Length = 255

 Score =  263 bits (672), Expect = 3e-69
 Identities = 135/139 (97%), Positives = 136/139 (97%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           IEQFRIAGATLGYDQRYQALENLGRIYLKLG+IASA  TFKQALLANRDSYISMLELAEI
Sbjct: 117 IEQFRIAGATLGYDQRYQALENLGRIYLKLGNIASAEKTFKQALLANRDSYISMLELAEI 176

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN LRALFPE
Sbjct: 177 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPE 236

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           SPEYQRYLQLQYSTEAVWK
Sbjct: 237 SPEYQRYLQLQYSTEAVWK 255


>tr|B7H071|B7H071_ACIBA Type IV pilus biogenesis/stability protein
           PilW OS=Acinetobacter baumannii AB307-0294 GN=pilF PE=4
           SV=1
          Length = 255

 Score =  263 bits (672), Expect = 3e-69
 Identities = 135/139 (97%), Positives = 136/139 (97%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           IEQFRIAGATLGYDQRYQALENLGRIYLKLG+IASA  TFKQALLANRDSYISMLELAEI
Sbjct: 117 IEQFRIAGATLGYDQRYQALENLGRIYLKLGNIASAEKTFKQALLANRDSYISMLELAEI 176

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN LRALFPE
Sbjct: 177 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPE 236

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           SPEYQRYLQLQYSTEAVWK
Sbjct: 237 SPEYQRYLQLQYSTEAVWK 255


>tr|Q6FEM5|Q6FEM5_ACIAD Type 4 fimbrial biogenesis protein
           OS=Acinetobacter sp. (strain ADP1) GN=pilF PE=4 SV=1
          Length = 266

 Score =  215 bits (547), Expect = 1e-54
 Identities = 106/139 (76%), Positives = 123/139 (88%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           I+Q  +AG++LGYDQRY+ALEN+GRIYL LG +A+A   F QAL ANRDS +SMLELAEI
Sbjct: 128 IQQLTLAGSSLGYDQRYRALENIGRIYLHLGGVANAEKMFSQALQANRDSSVSMLELAEI 187

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           +YLQQ+IPAAT MYEQYVRTVGQKNQGARALWIG+RVARANAD+ G+QVLVN LR  +P+
Sbjct: 188 YYLQQRIPAATGMYEQYVRTVGQKNQGARALWIGIRVARANADRTGVQVLVNQLRIFYPD 247

Query: 107 SPEYQRYLQLQYSTEAVWK 51
           S EYQRYL+LQYSTEAVWK
Sbjct: 248 SSEYQRYLKLQYSTEAVWK 266


>tr|Q1QD20|Q1QD20_PSYCK TPR repeat OS=Psychrobacter cryohalolentis
           (strain K5) GN=Pcryo_0650 PE=4 SV=1
          Length = 317

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 54/138 (39%), Positives = 79/138 (57%)
 Frame = -2

Query: 464 EQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIF 285
           EQF IAGA LGY+ R  ALENLGR YL+L D  +AA  F +AL  NR+S I+ +EL ++ 
Sbjct: 180 EQFEIAGAALGYEGRIGALENLGRTYLQLNDHPAAAKAFLRALDGNRNSVIAHIELVDLL 239

Query: 284 YLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPES 105
             QQ+I  A ++Y++ +  V  +    R L  G+++A A  +    Q L   L + +P S
Sbjct: 240 LEQQRIEQAQRLYDETLILVQGQGASPRLLLQGIKLAAAQKNIKTRQQLAQQLLSAYPLS 299

Query: 104 PEYQRYLQLQYSTEAVWK 51
            E ++      + EA WK
Sbjct: 300 DEAKQLKTWLNNPEAPWK 317


>tr|Q4FTW9|Q4FTW9_PSYA2 Possible type 4 fimbrial biogenesis protein
           OS=Psychrobacter arcticus (strain DSM 17307 / 273-4)
           GN=pilF PE=4 SV=1
          Length = 315

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 50/138 (36%), Positives = 77/138 (55%)
 Frame = -2

Query: 464 EQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIF 285
           EQF IAGA LGY+ R  ALENLGR YL+L D  +A   F +AL  NR+S I+ +E+ ++ 
Sbjct: 178 EQFEIAGAALGYEGRIGALENLGRTYLQLKDHPAAEKAFLRALDGNRNSIIAHIEMVDLL 237

Query: 284 YLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPES 105
             QQ+   A ++Y++ +  +  +    R L  G+++A A  +    Q L   L + +P S
Sbjct: 238 LEQQRFQQAQRLYDETLILLQGQGVSPRLLLQGIKLAAAQKNIETRQQLAQQLLSAYPLS 297

Query: 104 PEYQRYLQLQYSTEAVWK 51
            E ++      + EA WK
Sbjct: 298 DEAKQLKTWLNNPEAPWK 315


>tr|Q886Z2|Q886Z2_PSESM Type IV pilus biogenesis protein PilF
           OS=Pseudomonas syringae pv. tomato GN=pilF PE=4 SV=1
          Length = 252

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 44/130 (33%), Positives = 70/130 (53%)
 Frame = -2

Query: 464 EQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEIF 285
           E+F  A A   Y +R +  E+LG   LKLG+   A   F +AL  +R    S+LE+A+++
Sbjct: 126 ERFEQAAADNLYPERSRVFESLGMTSLKLGNREQAREQFTKALRLDRQQPRSLLEMAQLY 185

Query: 284 YLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPES 105
           Y  +Q   A   Y+++ +      Q AR+L +G R+A+   D+         L+ L+P +
Sbjct: 186 YEDRQYVPARDYYDRFSQL---SEQNARSLLLGTRLAKVYDDRNKAASYGLQLKRLYPGT 242

Query: 104 PEYQRYLQLQ 75
           PEYQ+YL  Q
Sbjct: 243 PEYQQYLSEQ 252


>tr|A0YCF9|A0YCF9_9GAMM Type 4 fimbrial biogenesis protein PilF
           OS=marine gamma proteobacterium HTCC2143 GN=GP2143_08009
           PE=4 SV=1
          Length = 258

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 41/127 (32%), Positives = 66/127 (51%)
 Frame = -2

Query: 467 IEQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAA*TFKQALLANRDSYISMLELAEI 288
           ++Q  +      YD+R  A  NLGR Y++L ++  A   F++A L N+ +     +LAE+
Sbjct: 126 VKQLELVVTDTLYDKRPAAYVNLGRSYMQLENLVKAEDAFRRAYLMNKRNVSLRYQLAEV 185

Query: 287 FYLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVN*LRALFPE 108
           +Y     P + Q Y+ Y   V Q  Q A ALW+G+R+A    ++  +      L+ L+P 
Sbjct: 186 YYQMGDYPKSQQYYDAYRNEVEQ--QPAAALWLGIRLADKFDNRDSLSSFSLALKNLYPT 243

Query: 107 SPEYQRY 87
           S EY  Y
Sbjct: 244 SKEYLLY 250