BP911862
Clone id YMU001_000010_B03
Library
Length 348
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGAAGATTGGCAGCTTGTTTGGGACATCCGACTGTAGGATCCTTGGGCATTGTAATCAG
CATGTTAGTGGGAGGAGAAGTTACTCTACTACGAAACATTGAAGAAGGTTGTGGAATTAT
TATAGAGGAGATGCCTATTCAGATTTTTGAACTCCTGTAATGTGTTCTTGTACTCGGATA
TGACTAGATGAGTTTGGTGATTTTGGACACCTTGAAATAAAGATCCAGAACCTGTTTATT
AAACTGTAGTAAGAGAGGTAGAGGATGGACTCGTAGATAGGAGTATCATTAGGGAGGGAT
GGCGCGAGGGAATGAGCTGCAGATATGAAGAGCATCATGGGAGTTATA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911862|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_B03.
(348 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A9TYF4
Definition tr|A9TYF4|A9TYF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 61
Score (bit) 42.0
E-value 0.015
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911862|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_B03.
(348 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TYF4|A9TYF4_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.015
tr|Q9FPI7|Q9FPI7_ARATH AT4g37020 (Putative uncharacterized prote... 39 0.17
tr|O23183|O23183_ARATH Putative uncharacterized protein C7A10.34... 36 1.1
tr|Q338P9|Q338P9_ORYSJ Os10g0388900 protein OS=Oryza sativa subs... 34 3.2
tr|B6UFC9|B6UFC9_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.2
tr|A7PL89|A7PL89_VITVI Chromosome chr7 scaffold_20, whole genome... 34 3.2

>tr|A9TYF4|A9TYF4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_172679 PE=4 SV=1
Length = 284

Score = 42.0 bits (97), Expect = 0.015
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +2

Query: 2 RRLAACL-------GHPTVGSL--GIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQIFEL 154
RR++ACL G P G + GIVIS++VGGEV LLR+ MPI I EL
Sbjct: 224 RRMSACLANAPIVVGAPNSGGIAGGIVISVVVGGEVGLLRSIEEGCCVTIEEMPIHISEL 283

Query: 155 L 157
L
Sbjct: 284 L 284


>tr|Q9FPI7|Q9FPI7_ARATH AT4g37020 (Putative uncharacterized protein
At4g37020) OS=Arabidopsis thaliana
GN=AT4g37020/C7A10_340 PE=2 SV=1
Length = 212

Score = 38.5 bits (88), Expect = 0.17
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +2

Query: 2 RRLAACLGHPTVGSLGIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQIFELL 157
RR+ CL S GIVI+M+VGGEVT L++ MPI I E+L
Sbjct: 166 RRITTCLA-----SGGIVINMVVGGEVTTLKSLEESSGILIAEMPINISEIL 212


>tr|O23183|O23183_ARATH Putative uncharacterized protein C7A10.340
(Putative uncharacterized protein AT4g37020)
OS=Arabidopsis thaliana GN=C7A10.340 PE=2 SV=2
Length = 225

Score = 35.8 bits (81), Expect = 1.1
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2

Query: 2 RRLAACLGHPTVGSLGIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQIF 148
RR+ CL S GIVI+M+VGGEVT L++ MPI ++
Sbjct: 133 RRITTCLA-----SGGIVINMVVGGEVTTLKSLEESSGILIAEMPINVY 176


>tr|Q338P9|Q338P9_ORYSJ Os10g0388900 protein OS=Oryza sativa subsp.
japonica GN=Os10g0388900 PE=2 SV=1
Length = 221

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2

Query: 2 RRLAACLGHPTVGSLGIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQIFELL 157
RR++ CL GIVI+M+VGGEV L+ MPI + E+L
Sbjct: 175 RRMSTCLAAD-----GIVINMVVGGEVATLKALEETSGLLIAEMPIHVSEIL 221


>tr|B6UFC9|B6UFC9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 226

Score = 34.3 bits (77), Expect = 3.2
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2

Query: 2 RRLAACLGHPTVGSLGIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQIFELL 157
RR++ CL GIVI+M+VGGEV L+ MPI + E+L
Sbjct: 180 RRMSTCLAAD-----GIVINMVVGGEVVTLKALXENSGLLIAEMPIHVSEIL 226


>tr|A7PL89|A7PL89_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019480001
PE=4 SV=1
Length = 198

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2

Query: 2 RRLAACLGHPTVGSLGIVISMLVGGEVTLLRNXXXXXXXXXXXMPIQI 145
RR+A CLG GIVI+M+VGGEV L++ MP+ +
Sbjct: 147 RRMATCLGAD-----GIVINMVVGGEVVTLKSMEESSGLTVAEMPMHV 189