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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911868
Clone id YMU001_000010_B09
Library
Length 449
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCTCTATATCCAGATCGGCACCACCAGACATCCCTATAGACCTTTCCCCATTTATAATA
CTGTTTTGTGACTGGCTGCCATGACTTGAGCAGCTAGGTTCCTCTTGGCCATAGCTCACA
ACCTCCCCATCTGCCCAGCTTTCCCGTGTATGCATTACGCCTCTCGTTTACGCTATGCTT
GCTAATTTCTTCGCGGCAGTCAAACTTCTCGGTACCCATGATTCTTTTGAGCCTCCAAAC
TTTGCAATAAAGTGTCTCCGCGCAGCCATCCTTCTTTGTACCCACTCTTGGTTTCAAGCC
CTTGCTCTCGATCTACATGACTATTGATACCATAAGAATTATCTTGCGGGCATTCCTCTT
CATCCCAATATTGAACCTCTTCCACTTGCGGTAGAAAGTGATTCCTGTATTCAAATCTTT
CACTCTGAGACTGTCTACGCATTCTCCCT
■■Homology search results ■■ -
sp_hit_id Q8GXF6
Definition sp|Q8GXF6|FBK85_ARATH F-box/kelch-repeat protein At4g19870 OS=Arabidopsis thaliana
Align length 93
Score (bit) 35.8
E-value 0.086
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911868|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_B09.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8GXF6|FBK85_ARATH F-box/kelch-repeat protein At4g19870 OS=Ar...    36   0.086
sp|P45385|IGA3_HAEIN Immunoglobulin A1 protease OS=Haemophilus i...    31   2.8  
sp|Q34902|CYB_LANLU Cytochrome b OS=Lanius ludovicianus GN=MT-CY...    30   6.1  
sp|Q8DUW1|AROC_STRMU Chorismate synthase OS=Streptococcus mutans...    29   8.0  

>sp|Q8GXF6|FBK85_ARATH F-box/kelch-repeat protein At4g19870
           OS=Arabidopsis thaliana GN=At4g19870 PE=2 SV=1
          Length = 400

 Score = 35.8 bits (81), Expect = 0.086
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
 Frame = -3

Query: 270 DGCAETLYCKVWRLKRIMGTEKFDCREEISKHSVNERRNAYTGKLGRWGGCE---LWPRG 100
           D   E   C ++R+  I G   F            ++  AY  K G W  CE    +PR 
Sbjct: 225 DPGTEIRNCTIYRIAEIEGKIHF---------GYTQKTYAYDPKQGEWECCEGEVAFPRS 275

Query: 99  T*LLKSWQPVTKQYYKWGKVYRDVWWCRSGYRE 1
             +++S        Y W   Y   WW   GY E
Sbjct: 276 QCVMESVLYTFANNYTWEDDYGCKWWSTDGYGE 308


>sp|P45385|IGA3_HAEIN Immunoglobulin A1 protease OS=Haemophilus
           influenzae GN=iga PE=3 SV=1
          Length = 1545

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 219 MGTEKFDCREEISKHSVNERRNAYTGKLGRWGG 121
           MGTEK D ++    H  NER N + G  G   G
Sbjct: 633 MGTEKADAQKNAMNHINNERMNGFNGYFGEEEG 665


>sp|Q34902|CYB_LANLU Cytochrome b OS=Lanius ludovicianus GN=MT-CYB
           PE=3 SV=1
          Length = 380

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 68  VTGCHDLSS*VPLGHSSQPPHLPSFPVYALR--LSFTLCLLISSRQSNFSVPMI 223
           +T  H+  S  PLG  S    +P  P Y+++  L F L L++ +R + FS  M+
Sbjct: 198 LTFLHETGSNNPLGIPSDCDKIPFHPYYSIKDILGFALMLILLARLALFSPNML 251


>sp|Q8DUW1|AROC_STRMU Chorismate synthase OS=Streptococcus mutans
           GN=aroC PE=3 SV=1
          Length = 388

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 304 QGLETKSGYKEGWLRGDTLLQSLEAQKNHGYR 209
           +G+E   G+K+G+L+G  ++  +   K  GYR
Sbjct: 254 KGVEFGLGFKDGYLKGSYVMDEITWSKEDGYR 285
tr_hit_id Q1DIR9
Definition tr|Q1DIR9|Q1DIR9_COCIM Putative uncharacterized protein OS=Coccidioides immitis
Align length 45
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911868|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_B09.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1DIR9|Q1DIR9_COCIM Putative uncharacterized protein OS=Cocci...    35   1.9  
tr|Q9KPT3|Q9KPT3_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A5F5Z0|A5F5Z0_VIBC3 Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|Q2C665|Q2C665_9GAMM Putative aminoacyl-histidine dipeptidase ...    34   4.2  
tr|Q1ZPN2|Q1ZPN2_9VIBR Putative aminoacyl-histidine dipeptidase ...    34   4.2  
tr|A6Y3A2|A6Y3A2_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A6XUW2|A6XUW2_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A6AA17|A6AA17_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A6A5Y0|A6A5Y0_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A3H293|A3H293_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A3GRJ5|A3GRJ5_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A3EN29|A3EN29_VIBCH Aminoacyl-histidine dipeptidase (Fragment...    34   4.2  
tr|A3EAY0|A3EAY0_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A2PQJ1|A2PQJ1_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A2PG07|A2PG07_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A2PA82|A2PA82_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A1F278|A1F278_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A1EKA0|A1EKA0_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio...    34   4.2  
tr|A5UD81|A5UD81_HAEIE Recombination protein F OS=Haemophilus in...    33   9.4  
tr|B0N9M6|B0N9M6_EUBSP Putative uncharacterized protein OS=Clost...    33   9.4  
tr|A4N1T0|A4N1T0_HAEIN Immunoglobin A1 protease OS=Haemophilus i...    33   9.4  
tr|Q6FL30|Q6FL30_CANGA Strain CBS138 chromosome L complete seque...    33   9.4  

>tr|Q1DIR9|Q1DIR9_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_09794 PE=4 SV=1
          Length = 1093

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +2

Query: 62  CFVTGCHDLSS*VPLGHSSQPPHLPSFPVYALRLSFTLCLLISSR 196
           C     HD     PL      PHL S PVY   L++ LCLL++SR
Sbjct: 43  CETNDGHDTQDTTPLLPIFSAPHLDSLPVY--HLTYDLCLLVASR 85


>tr|Q9KPT3|Q9KPT3_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae GN=VC_2279 PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|A5F5Z0|A5F5Z0_VIBC3 Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
           O395) GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|Q2C665|Q2C665_9GAMM Putative aminoacyl-histidine dipeptidase
           OS=Photobacterium sp. SKA34 GN=SKA34_01722 PE=4 SV=1
          Length = 486

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 143 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 177


>tr|Q1ZPN2|Q1ZPN2_9VIBR Putative aminoacyl-histidine dipeptidase
           OS=Vibrio angustum S14 GN=VAS14_16781 PE=4 SV=1
          Length = 486

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 143 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 177


>tr|A6Y3A2|A6Y3A2_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae RC385 GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|A6XUW2|A6XUW2_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae AM-19226 GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|A6AA17|A6AA17_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae 623-39 GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|A6A5Y0|A6A5Y0_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae MZO-2 GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225


>tr|A3H293|A3H293_VIBCH Aminoacyl-histidine dipeptidase OS=Vibrio
           cholerae B33 GN=pepD PE=4 SV=1
          Length = 534

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 316 VDREQGLETKSGYKEGWLRGDTLLQSLEAQKNHGY 212
           +D E G+    G KEGWL GD LL +   Q+   Y
Sbjct: 191 IDEEAGMTGAFGLKEGWLEGDILLNTDSEQEGEVY 225