BP911869 |
Clone id |
YMU001_000010_B10 |
Library |
YMU01 |
Length |
551 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_B10. |
Accession |
BP911869 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1561Contig1 |
Sequence |
CGGCATTAAAGACCTACCACCACCTGTGATGCTCAATAGAGGCCTTCCTCAACATATTGC ATGTGGTCAACCTGCAAAAAGCTCCCCTATCACTCTGAATGCATATGGCATTGGGGATAG ATCACTCAAGCTATATTCTCCACACTCTAATCTTCACTTCCAAAAGCTTGAAACTTGCCC ATTTCCTCTTGCCTGTCCGCGTCAGCATAAATATTACTCATATAGACATACCCTGCAGCA AACTGGTCATCCAAATGTAGAGCACGCTCAAAGACCCATCGTCCGAGCTCCAAGTTGGCT CCTTTTTGACAAGCACCCAACAGCACTGAGCATAGGATAAGCTTGTCGGAATTTGGCACT TCATTAATGGTACACACTGCCTTGTCAACATGCCCCGCACGGCTGAAAAGATCAATCATG CAAGCATGGTGATCTAAAGTTGGCATAATGCAATGGTCAGTGCTCATACTGTTAAAGTGC TTCTGTCCCTCATTCAACAGACCTTCATGACTGCACGCAGTCAGCAAAACAATAAATGTT ATCTCATCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5G1T1 |
Definition |
sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana |
Align length |
123 |
Score (bit) |
115.0 |
E-value |
1.0e-25 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0W0 |
Definition |
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
126 |
Score (bit) |
117.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911869|Adiantum capillus-veneris mRNA, clone: YMU001_000010_B10. (551 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 117 5e-25 tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subs... 115 2e-24 tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genom... 115 2e-24 tr|A2Y1K2|A2Y1K2_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|A7R627|A7R627_VITVI Chromosome undetermined scaffold_1140, wh... 114 4e-24 tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, who... 114 4e-24 tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, who... 113 6e-24 tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing... 113 8e-24 tr|A3B7R9|A3B7R9_ORYSJ Putative uncharacterized protein OS=Oryza... 113 8e-24 tr|A2WWE8|A2WWE8_ORYSI Putative uncharacterized protein OS=Oryza... 113 8e-24 tr|A7PDX6|A7PDX6_VITVI Chromosome chr11 scaffold_13, whole genom... 112 1e-23 tr|Q7XV62|Q7XV62_ORYSJ OSJNBa0006B20.5 protein (Putative unchara... 112 2e-23 tr|B8AU15|B8AU15_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|Q60EM0|Q60EM0_ORYSJ Os05g0455900 protein OS=Oryza sativa subs... 111 2e-23 tr|A2Y5C6|A2Y5C6_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|Q0DJA4|Q0DJA4_ORYSJ Os05g0307200 protein OS=Oryza sativa subs... 111 3e-23 tr|B8AWD0|B8AWD0_ORYSI Putative uncharacterized protein OS=Oryza... 111 3e-23 tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genom... 111 3e-23 tr|A7P390|A7P390_VITVI Chromosome chr1 scaffold_5, whole genome ... 110 4e-23 tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m... 110 5e-23 tr|A5BCC4|A5BCC4_VITVI Putative uncharacterized protein OS=Vitis... 110 6e-23 tr|B8LQA8|B8LQA8_PICSI Putative uncharacterized protein OS=Picea... 108 2e-22 tr|A7Q306|A7Q306_VITVI Chromosome chr12 scaffold_47, whole genom... 108 2e-22 tr|A7PEX7|A7PEX7_VITVI Chromosome chr11 scaffold_13, whole genom... 108 2e-22 tr|A7P2L5|A7P2L5_VITVI Chromosome chr1 scaffold_5, whole genome ... 108 2e-22 tr|Q5ZAF9|Q5ZAF9_ORYSJ Pentatricopeptide (PPR) repeat-containing... 107 3e-22 tr|Q0JLH3|Q0JLH3_ORYSJ Os01g0600400 protein (Fragment) OS=Oryza ... 107 3e-22 tr|B8AB74|B8AB74_ORYSI Putative uncharacterized protein OS=Oryza... 107 3e-22 tr|B4FZF5|B4FZF5_MAIZE Putative uncharacterized protein OS=Zea m... 107 3e-22 tr|A2ZV37|A2ZV37_ORYSJ Putative uncharacterized protein OS=Oryza... 107 3e-22
>tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 370
Score = 117 bits (292), Expect = 5e-25 Identities = 55/126 (43%), Positives = 84/126 (66%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P++ITF+V+L+ CSH GL++EG+ +F+SM+ DH I P +H++CM+DLF RAG +D+A+ Sbjct: 97 PNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALN 156
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 IN++P + LLGAC+ N+EL E+ + L + YV +SNIYA A R Sbjct: 157 FINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGR 216
Query: 191 QEEMGK 174 ++ GK Sbjct: 217 WDDAGK 222
>tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0074P11.10 PE=2 SV=1 Length = 822
Score = 115 bits (287), Expect = 2e-24 Identities = 51/129 (39%), Positives = 88/129 (68%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P+++T+I +L+ACSH GL+ EG+++F SM DH ++P ++H+ACM+DL +R+G V +A+ Sbjct: 549 PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALE 608
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 INE+P ++ LLGAC+ N+E+G + + L+ + A YV +SN+YADA Sbjct: 609 FINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGL 668
Query: 191 QEEMGKFQA 165 +E+ + ++ Sbjct: 669 WDEVARIRS 677
>tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011403001 PE=4 SV=1 Length = 868
Score = 115 bits (287), Expect = 2e-24 Identities = 55/125 (44%), Positives = 85/125 (68%) Frame = -1
Query: 548 DEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVCT 369 D ITFI +++AC+H GL+NEGQ++F+ M D+ I+PT++H++CM+DL+SRAG ++KA+ Sbjct: 596 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 655
Query: 368 INEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADRQ 189 IN++P + LL AC+ N++LG E+ + L Q +A YV +SNIYA A Sbjct: 656 INKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 715
Query: 188 EEMGK 174 +E K Sbjct: 716 QERAK 720
>tr|A2Y1K2|A2Y1K2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18881 PE=4 SV=1 Length = 822
Score = 114 bits (286), Expect = 3e-24 Identities = 51/129 (39%), Positives = 88/129 (68%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P+++T+I +L+ACSH GL+ EG+++F SM DH ++P ++H+ACM+DL +R+G V +A+ Sbjct: 549 PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALE 608
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 INE+P ++ LLGAC+ N+E+G + + L+ + A YV +SN+YADA Sbjct: 609 FINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGL 668
Query: 191 QEEMGKFQA 165 +E+ + ++ Sbjct: 669 WDEVARIRS 677
>tr|A7R627|A7R627_VITVI Chromosome undetermined scaffold_1140, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00007922001 PE=4 SV=1 Length = 803
Score = 114 bits (284), Expect = 4e-24 Identities = 53/128 (41%), Positives = 85/128 (66%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P+EIT++ +L+ACSH G+++EGQKHFNSM +H I+P ++H+ACM+DL R+G + +A+ Sbjct: 541 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 600
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 IN +P ++ LLGAC+ N ELGR E L + A Y+ +SN++A A + Sbjct: 601 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 660
Query: 191 QEEMGKFQ 168 +++ K + Sbjct: 661 WKDVVKIR 668
>tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00013634001 PE=4 SV=1 Length = 1029
Score = 114 bits (284), Expect = 4e-24 Identities = 53/128 (41%), Positives = 85/128 (66%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P+EIT++ +L+ACSH G+++EGQKHFNSM +H I+P ++H+ACM+DL R+G + +A+ Sbjct: 756 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 815
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 IN +P ++ LLGAC+ N ELGR E L + A Y+ +SN++A A + Sbjct: 816 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 875
Query: 191 QEEMGKFQ 168 +++ K + Sbjct: 876 WKDVVKIR 883
>tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00006516001 PE=4 SV=1 Length = 737
Score = 113 bits (283), Expect = 6e-24 Identities = 53/128 (41%), Positives = 84/128 (65%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 P+EIT++ +L+ACSH G+++EGQKHFNSM +H I+P ++H+ACM+DL R+G + +A+ Sbjct: 464 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 523
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 IN +P ++ LLGAC N ELGR E L + A Y+ +SN++A A + Sbjct: 524 FINSMPLMADALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 583
Query: 191 QEEMGKFQ 168 +++ K + Sbjct: 584 WKDVVKIR 591
>tr|Q8LQE8|Q8LQE8_ORYSJ Pentatricopeptide (PPR) repeat-containing protein-like (Os01g0819800 protein) OS=Oryza sativa subsp. japonica GN=OJ1529_G03.20 PE=4 SV=1 Length = 646
Score = 113 bits (282), Expect = 8e-24 Identities = 53/129 (41%), Positives = 82/129 (63%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 PD + + LL+ACSH G+ +EG+K+F++M D+C+ P L+H+ CM+DL RAG +D+A Sbjct: 372 PDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARE 431
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 I +P + + LLGAC+ N+E+G FER + L+ YV M+NIYADA + Sbjct: 432 LIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQ 491
Query: 191 QEEMGKFQA 165 + + K +A Sbjct: 492 LDGVAKVRA 500
>tr|A3B7R9|A3B7R9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019091 PE=4 SV=1 Length = 602
Score = 113 bits (282), Expect = 8e-24 Identities = 53/129 (41%), Positives = 82/129 (63%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 PD + + LL+ACSH G+ +EG+K+F++M D+C+ P L+H+ CM+DL RAG +D+A Sbjct: 328 PDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARE 387
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 I +P + + LLGAC+ N+E+G FER + L+ YV M+NIYADA + Sbjct: 388 LIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQ 447
Query: 191 QEEMGKFQA 165 + + K +A Sbjct: 448 LDGVAKVRA 456
>tr|A2WWE8|A2WWE8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04228 PE=4 SV=1 Length = 646
Score = 113 bits (282), Expect = 8e-24 Identities = 53/129 (41%), Positives = 82/129 (63%) Frame = -1
Query: 551 PDEITFIVLLTACSHEGLLNEGQKHFNSMSTDHCIMPTLDHHACMIDLFSRAGHVDKAVC 372 PD + + LL+ACSH G+ +EG+K+F++M D+C+ P L+H+ CM+DL RAG +D+A Sbjct: 372 PDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARE 431
Query: 371 TINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADR 192 I +P + + LLGAC+ N+E+G FER + L+ YV M+NIYADA + Sbjct: 432 LIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQ 491
Query: 191 QEEMGKFQA 165 + + K +A Sbjct: 492 LDGVAKVRA 500
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