BP911874 |
Clone id |
YMU001_000010_C04 |
Library |
YMU01 |
Length |
446 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_C04. |
Accession |
BP911874 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1114Contig1 |
Sequence |
CAGATGTAGCCCAGGATCTTCTAAGAGCAGCGGATCAGTATTTGCTGGAAGGCTTGAAGA GATTGTGTGAGCATGCTATAGCGCAGGATTTGACTGTTGACAATGTGGCGATTGTGTACG ACTTGACAGAGGCATACCATGCTTTATCGCCGGGGCATACATGTGTTTTATTTATCCTCG AACAGCACAAGCAAATGTGTACCATGACAGGGTATCCAGCATTGATACAAAACAATCATT CCAGAGATTCGAGACTATTTGGTGAGGATCTTAAGAGCTCAGCCATGTATCAGAACCCTT TCTTGAGAGAGCCTGCTGGACCAGTGTGTATTATGAAAGAAGGTTTGTAGGACTGCAAAG ATGGGTGCAGAACTTGTTTTATGTGGCCAGCAGTTTTCCTCTTGGTTGGAGTTCTGTAGC TATCATTGGTCTATACCTTTTAACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6P8B3 |
Definition |
sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis |
Align length |
103 |
Score (bit) |
51.6 |
E-value |
1.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SKE0 |
Definition |
tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
75 |
Score (bit) |
114.0 |
E-value |
1.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911874|Adiantum capillus-veneris mRNA, clone: YMU001_000010_C04. (446 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella paten... 114 1e-26 tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella paten... 115 6e-26 tr|Q688N3|Q688N3_ORYSJ Os05g0398100 protein OS=Oryza sativa subs... 111 2e-23 tr|B8AY14|B8AY14_ORYSI Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A3B3T4|A3B3T4_ORYSJ Putative uncharacterized protein OS=Oryza... 111 2e-23 tr|A7NWJ3|A7NWJ3_VITVI Chromosome chr5 scaffold_2, whole genome ... 105 1e-21 tr|B8A3I0|B8A3I0_MAIZE Putative uncharacterized protein OS=Zea m... 103 5e-21 tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome... 101 2e-20 tr|A5ASC1|A5ASC1_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|A5C2B5|A5C2B5_VITVI Putative uncharacterized protein OS=Vitis... 97 5e-19 tr|Q56ZQ9|Q56ZQ9_ARATH Putative uncharacterized protein At5g1933... 89 1e-16 tr|B7U179|B7U179_ARATH ABAP1 OS=Arabidopsis thaliana GN=ABAP1 PE... 70 7e-12 tr|Q8RY88|Q8RY88_ARATH Putative uncharacterized protein At5g1306... 70 7e-12 tr|Q9FYA4|Q9FYA4_ARATH Putative uncharacterized protein T19L5_20... 70 7e-12 tr|A8JIB4|A8JIB4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 70 5e-11 tr|A7R5F6|A7R5F6_VITVI Chromosome undetermined scaffold_955, who... 62 1e-08 tr|A7R8X3|A7R8X3_VITVI Chromosome undetermined scaffold_3067, wh... 57 6e-07 tr|A7R478|A7R478_VITVI Chromosome undetermined scaffold_624, who... 56 1e-06 tr|Q3E9C1|Q3E9C1_ARATH Uncharacterized protein At5g19330.2 OS=Ar... 52 2e-06 tr|A8QBM6|A8QBM6_BRUMA BTB/POZ domain containing protein OS=Brug... 53 7e-06 tr|Q6YZP9|Q6YZP9_ORYSJ Putative speckle-type POZ protein (Putati... 52 1e-05 tr|Q0J762|Q0J762_ORYSJ Os08g0228200 protein OS=Oryza sativa subs... 52 1e-05 tr|A2YSL5|A2YSL5_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A2YSL4|A2YSL4_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A7QXT0|A7QXT0_VITVI Chromosome undetermined scaffold_230, who... 52 2e-05 tr|B5X432|B5X432_SALSA Speckle-type POZ protein OS=Salmo salar G... 51 2e-05 tr|Q5BJL3|Q5BJL3_RAT Spop protein (Fragment) OS=Rattus norvegicu... 51 2e-05 tr|Q3THQ1|Q3THQ1_MOUSE Putative uncharacterized protein OS=Mus m... 51 2e-05 tr|B2RYD9|B2RYD9_RAT Spop protein (Speckle-type POZ protein, iso... 51 2e-05 tr|A0JLP8|A0JLP8_MOUSE Spop protein (Fragment) OS=Mus musculus G... 51 2e-05
>tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106616 PE=4 SV=1 Length = 695
Score = 114 bits (284), Expect(2) = 1e-26 Identities = 54/75 (72%), Positives = 66/75 (88%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D AQDLLRAADQYLLEGLKRLCE+++AQ+LT++ + VYDL EAYHALS TCVLFIL+ Sbjct: 598 DNAQDLLRAADQYLLEGLKRLCEYSMAQNLTLETLMNVYDLAEAYHALSLRDTCVLFILK 657
Query: 183 QHKQMCTMTGYPALI 227 H+QMC++TGYPAL+ Sbjct: 658 HHEQMCSITGYPALL 672
Score = 28.9 bits (63), Expect(2) = 1e-26 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +1
Query: 235 IIPEIRDYLVRILRAQP 285 I PEIR+YL RILR QP Sbjct: 675 ITPEIREYLRRILRPQP 691
>tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106476 PE=4 SV=1 Length = 698
Score = 115 bits (287), Expect(2) = 6e-26 Identities = 56/75 (74%), Positives = 65/75 (86%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D AQDLLRAADQYLLEGLKRLCE++IAQ+LT++ V V+DL EAYHALS TCVLFIL+ Sbjct: 601 DNAQDLLRAADQYLLEGLKRLCEYSIAQNLTLETVMNVFDLAEAYHALSLRDTCVLFILK 660
Query: 183 QHKQMCTMTGYPALI 227 H+QMC MTGYPAL+ Sbjct: 661 HHEQMCGMTGYPALL 675
Score = 25.4 bits (54), Expect(2) = 6e-26 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1
Query: 235 IIPEIRDYLVRILRAQP 285 I EIR+YL RILR QP Sbjct: 678 ISSEIREYLRRILRPQP 694
>tr|Q688N3|Q688N3_ORYSJ Os05g0398100 protein OS=Oryza sativa subsp. japonica GN=P0605G01.6 PE=4 SV=1 Length = 752
Score = 111 bits (278), Expect = 2e-23 Identities = 56/99 (56%), Positives = 71/99 (71%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D++QDLLRAADQYLLEGLKRLCE+ IAQD+ VDNV+ +YDL+EA+HA+S HTCVLFILE Sbjct: 654 DISQDLLRAADQYLLEGLKRLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILE 713
Query: 183 QHKQMCTMTGYPALIQNNHSRDSRLFGEDLKSSAMYQNP 299 Q +++C +G LIQ F + L+ S P Sbjct: 714 QFEKICVKSGSSQLIQRVIPELRNFFAKALRPSHRNAQP 752
>tr|B8AY14|B8AY14_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19876 PE=4 SV=1 Length = 677
Score = 111 bits (278), Expect = 2e-23 Identities = 56/99 (56%), Positives = 71/99 (71%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D++QDLLRAADQYLLEGLKRLCE+ IAQD+ VDNV+ +YDL+EA+HA+S HTCVLFILE Sbjct: 579 DISQDLLRAADQYLLEGLKRLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILE 638
Query: 183 QHKQMCTMTGYPALIQNNHSRDSRLFGEDLKSSAMYQNP 299 Q +++C +G LIQ F + L+ S P Sbjct: 639 QFEKICVKSGSSQLIQRVIPELRNFFAKALRPSHRNAQP 677
>tr|A3B3T4|A3B3T4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017706 PE=4 SV=1 Length = 599
Score = 111 bits (278), Expect = 2e-23 Identities = 56/99 (56%), Positives = 71/99 (71%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D++QDLLRAADQYLLEGLKRLCE+ IAQD+ VDNV+ +YDL+EA+HA+S HTCVLFILE Sbjct: 501 DISQDLLRAADQYLLEGLKRLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILE 560
Query: 183 QHKQMCTMTGYPALIQNNHSRDSRLFGEDLKSSAMYQNP 299 Q +++C +G LIQ F + L+ S P Sbjct: 561 QFEKICVKSGSSQLIQRVIPELRNFFAKALRPSHRNAQP 599
>tr|A7NWJ3|A7NWJ3_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019943001 PE=4 SV=1 Length = 149
Score = 105 bits (261), Expect = 1e-21 Identities = 48/76 (63%), Positives = 65/76 (85%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D+AQDLLRAADQYLLEGLKRLCE+ IAQD++++NV+ +Y+L+EA+HA+S HTC+LFILE Sbjct: 50 DIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILFILE 109
Query: 183 QHKQMCTMTGYPALIQ 230 Q ++ + G+ LIQ Sbjct: 110 QFSKLSSRPGHSHLIQ 125
>tr|B8A3I0|B8A3I0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 178
Score = 103 bits (256), Expect = 5e-21 Identities = 47/76 (61%), Positives = 62/76 (81%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 ++AQDLLRA DQYLLEGLKRLCE+ IA+D+ +DNV+ +YDL+EA+HA+S HTC+L+ILE Sbjct: 73 EIAQDLLRAGDQYLLEGLKRLCEYTIAKDVNLDNVSDMYDLSEAFHAVSLRHTCILYILE 132
Query: 183 QHKQMCTMTGYPALIQ 230 ++CT G LIQ Sbjct: 133 HFNKICTRAGSAQLIQ 148
>tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023713001 PE=4 SV=1 Length = 704
Score = 101 bits (252), Expect = 2e-20 Identities = 46/76 (60%), Positives = 65/76 (85%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D+AQDLLRAADQYLLEGLKRLCE+AIAQD++V+NV+++Y+L+EA++A++ HTC+L+ILE Sbjct: 603 DIAQDLLRAADQYLLEGLKRLCEYAIAQDISVENVSLMYELSEAFNAMTLRHTCILYILE 662
Query: 183 QHKQMCTMTGYPALIQ 230 +++ Y LIQ Sbjct: 663 HFEKLTVKPWYSRLIQ 678
>tr|A5ASC1|A5ASC1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012185 PE=4 SV=1 Length = 726
Score = 100 bits (249), Expect = 4e-20 Identities = 45/70 (64%), Positives = 61/70 (87%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D+AQDLLRAADQYLLEGLKRLCE+ IAQD++++NV+ +Y+L+EA+HA+S HTC+LFILE Sbjct: 594 DIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILFILE 653
Query: 183 QHKQMCTMTG 212 Q ++ + G Sbjct: 654 QFSKLSSRPG 663
>tr|A5C2B5|A5C2B5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011897 PE=3 SV=1 Length = 1622
Score = 96.7 bits (239), Expect = 5e-19 Identities = 42/65 (64%), Positives = 61/65 (93%) Frame = +3
Query: 3 DVAQDLLRAADQYLLEGLKRLCEHAIAQDLTVDNVAIVYDLTEAYHALSPGHTCVLFILE 182 D+AQDLLRAADQYLLEGLKRLCE+AIAQD++V+NV+++Y+L+EA++A++ HTC+L+ILE Sbjct: 664 DIAQDLLRAADQYLLEGLKRLCEYAIAQDISVENVSLMYELSEAFNAMTLRHTCILYILE 723
Query: 183 QHKQM 197 +++ Sbjct: 724 HFEKL 728
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