| BP911886 |
| Clone id |
YMU001_000010_D07 |
| Library |
YMU01 |
| Length |
487 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_D07. |
| Accession |
BP911886 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL2095Contig1 |
| Sequence |
ACCCCGTGGTCCTTGCAAGGGGCAGCCGCCTAGCGAAGAGACAAAGACTGCCGAAGAAGA
GAAGGTGAGGCTCCTCATCATCCGTGACGCTGTCCTGTGGAAAATTGACACCAAGTCATT
AGGCAGCCGATCGCTGCTGTCCTAGCATAGCTGGCCTTGCGAGTTGCCACACTGCCAACA
AGCTTTGTGAAATTTTGTCTTGCATCCATTTTGATAGTGCAGGCATGCCTTGTCTTTGGC
ATAGCATATCATTGTCCTACACGTCATAATTTGCAGCACTATCTCTACAGGATTTGGACA
TCTTGGTCGATGTTTTCTTGCTCACGCACTACTCTCACCTTGGCCACATAGCCATGTCAT
CAGTACTTGCTCTATTCTATTGCCCTGCCCAAGCTAAACCGAAGCCTTGCTCACCAATGC
TCATCTCGTCACACATGCTACAACTTGGAGCGCATCTCTCACTGCTCATACTAGCCTCAC
ACGCCGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P98167 |
| Definition |
sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus |
| Align length |
35 |
| Score (bit) |
32.7 |
| E-value |
0.9 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911886|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D07.
(487 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2 33 0.90
sp|P12493|GAG_HV1N5 Gag polyprotein OS=Human immunodeficiency vi... 32 1.2
sp|O12157|GAG_HV192 Gag polyprotein OS=Human immunodeficiency vi... 32 1.5
sp|P12497|POL_HV1N5 Gag-Pol polyprotein OS=Human immunodeficienc... 32 2.0
sp|O12158|POL_HV192 Gag-Pol polyprotein OS=Human immunodeficienc... 31 3.4
sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1 30 4.5
sp|O89939|GAG_HV1SE Gag polyprotein OS=Human immunodeficiency vi... 30 4.5
sp|P03349|GAG_HV1A2 Gag polyprotein OS=Human immunodeficiency vi... 30 4.5
sp|O93182|GAG_HV190 Gag polyprotein OS=Human immunodeficiency vi... 30 4.5
sp|P03369|POL_HV1A2 Gag-Pol polyprotein OS=Human immunodeficienc... 30 7.6
sp|Q9QBZ9|POL_HV197 Gag-Pol polyprotein OS=Human immunodeficienc... 30 7.6
sp|Q1A268|GAG_SIVMB Gag polyprotein OS=Simian immunodeficiency v... 30 7.6
sp|Q1L0X2|SPY1_CEREL Protein sprouty homolog 1 OS=Cervus elaphus... 29 9.9
sp|A5D992|SPY1_BOVIN Protein sprouty homolog 1 OS=Bos taurus GN=... 29 9.9
sp|P04594|GAG_HV1MA Gag polyprotein OS=Human immunodeficiency vi... 29 9.9
sp|P05887|GAG_HV1C4 Gag polyprotein OS=Human immunodeficiency vi... 29 9.9
sp|Q73367|GAG_HV1B9 Gag polyprotein OS=Human immunodeficiency vi... 29 9.9
sp|P04593|GAG_HV1B5 Gag polyprotein OS=Human immunodeficiency vi... 29 9.9
>sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2
Length = 5146
Score = 32.7 bits (73), Expect = 0.90
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 348 CGQGESSA*ARKHRPRCPNPVEIVLQIMTCRTMIC 244
CG GE R RP CP P Q TCRT +C
Sbjct: 3642 CGGGEQLRFRRCPRPPCPGPAR---QSRTCRTQVC 3673
>sp|P12493|GAG_HV1N5 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate NY5 group M subtype B) GN=gag PE=1 SV=3
Length = 500
Score = 32.3 bits (72), Expect = 1.2
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = -2
Query: 393 LGQGNRIEQVLMTW--LCGQGESSA*ARKHRPRCPNPVEIVLQIMTCR----TMICYAKD 232
LG G +E+++ + G G + + + NP I++Q R T+ C+
Sbjct: 337 LGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCG 396
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ K CW+CG +G D ++R N L I+
Sbjct: 397 KEG-HIAKNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIW 438
>sp|O12157|GAG_HV192 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate 92BR025 group M subtype C) GN=gag PE=3
SV=3
Length = 496
Score = 32.0 bits (71), Expect = 1.5
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*ARKHRPRCP--NPVEIVLQIMTC----RTMICYAKD 232
LG G +E+ +MT G G AR N I++Q C RT+ C+
Sbjct: 335 LGPGASLEE-MMTACQGVGGPGHKARVLAEAMSKVNNTNIMMQRSNCKGPKRTIKCFNCG 393
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ K CW+CG +G D ++R N L I+
Sbjct: 394 KEG-HLARNCRAPRKKGCWKCG-KEGHQVKDCTERQANFLGKIW 435
>sp|P12497|POL_HV1N5 Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate NY5 group M subtype B) GN=gag-pol
PE=1 SV=3
Length = 1435
Score = 31.6 bits (70), Expect = 2.0
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTW--LCGQGESSA*ARKHRPRCPNPVEIVLQIMTCR----TMICYAKD 232
LG G +E+++ + G G + + + NP I++Q R T+ C+
Sbjct: 337 LGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCG 396
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDL 112
K H C+ K CW+CG +G D ++R N L
Sbjct: 397 KEG-HIAKNCRAPRKKGCWKCGK-EGHQMKDCTERQANFL 434
>sp|O12158|POL_HV192 Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate 92BR025 group M subtype C)
GN=gag-pol PE=1 SV=2
Length = 1431
Score = 30.8 bits (68), Expect = 3.4
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*ARKHRPRCP--NPVEIVLQIMTC----RTMICYAKD 232
LG G +E+ +MT G G AR N I++Q C RT+ C+
Sbjct: 335 LGPGASLEE-MMTACQGVGGPGHKARVLAEAMSKVNNTNIMMQRSNCKGPKRTIKCFNCG 393
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPN 118
K H C+ K CW+CG +G D ++R N
Sbjct: 394 KEG-HLARNCRAPRKKGCWKCG-KEGHQVKDCTERQAN 429
>sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1
Length = 5147
Score = 30.4 bits (67), Expect = 4.5
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 348 CGQGESSA*ARKHRPRCPNPVEIVLQIMTCRTMIC 244
CG GE R RP CP P Q TC T +C
Sbjct: 3661 CGGGEQLRSRRCARPPCPGPAR---QSRTCSTQVC 3692
>sp|O89939|GAG_HV1SE Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate SE6165 group M subtype G) GN=gag PE=3
SV=3
Length = 495
Score = 30.4 bits (67), Expect = 4.5
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*ARKHRPRCPNPVEIVLQIMTCR--------TMICYA 238
LGQG +E+ +MT G G S AR IM R T+ C+
Sbjct: 337 LGQGASLEE-MMTACQGVGGPSHKARVLAEAMSQASGAAAAIMMQRSNFKGPRRTIKCFN 395
Query: 237 KDKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIFHRTASR 82
K H C+ K CW+CG +G D ++R N L I+ R
Sbjct: 396 CGKEG-HLARNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIWPSNKGR 445
>sp|P03349|GAG_HV1A2 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate ARV2/SF2 group M subtype B) GN=gag PE=3
SV=3
Length = 502
Score = 30.4 bits (67), Expect = 4.5
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = -2
Query: 345 GQGESSA*ARKHRPRCPNPVEIVLQIMTCR----TMICYAKDKACLHYQNGCKTKFHKAC 178
G G + + + NP I++Q R T+ C+ K H C+ K C
Sbjct: 357 GPGHKARVLAEAMSQVTNPANIMMQRGNFRNQRKTVKCFNCGKEG-HIAKNCRAPRKKGC 415
Query: 177 WQCGNSQGQLC*DSSDRLPNDLVSIF 100
W+CG +G D ++R N L I+
Sbjct: 416 WRCGR-EGHQMKDCTERQANFLGKIW 440
>sp|O93182|GAG_HV190 Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate 90CF056 group M subtype H) GN=gag PE=3
SV=3
Length = 500
Score = 30.4 bits (67), Expect = 4.5
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*ARKHRPRCPNPVEIVLQIMTCRTMICYAKDK----- 229
LGQG IE+ +MT G G S H+ R E + Q+ T I K
Sbjct: 337 LGQGASIEE-MMTACQGVGGPS-----HKARVL--AEAMSQVTNTNTAIMMQKGNFKGQR 388
Query: 228 ---ACL------HYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIFHRTASR 82
C H C+ K CW+CG +G D ++R N L I+ + R
Sbjct: 389 KFVKCFNCGKEGHIARNCRAPRKKGCWKCGR-EGHQMKDCTERQANFLGKIWPSSKGR 445
>sp|P03369|POL_HV1A2 Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate ARV2/SF2 group M subtype B)
GN=gag-pol PE=1 SV=3
Length = 1437
Score = 29.6 bits (65), Expect = 7.6
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = -2
Query: 345 GQGESSA*ARKHRPRCPNPVEIVLQIMTCR----TMICYAKDKACLHYQNGCKTKFHKAC 178
G G + + + NP I++Q R T+ C+ K H C+ K C
Sbjct: 357 GPGHKARVLAEAMSQVTNPANIMMQRGNFRNQRKTVKCFNCGKEG-HIAKNCRAPRKKGC 415
Query: 177 WQCGNSQGQLC*DSSDRLPNDL 112
W+CG +G D ++R N L
Sbjct: 416 WRCGR-EGHQMKDCTERQANFL 436
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q2EFS2 |
| Definition |
tr|Q2EFS2|Q2EFS2_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 |
| Align length |
101 |
| Score (bit) |
34.3 |
| E-value |
3.2 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911886|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D07.
(487 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q2EFS2|Q2EFS2_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 34 3.2
tr|B6S6L2|B6S6L2_9HIV1 Gag protein (Fragment) OS=Human immunodef... 34 3.2
tr|B6S6L1|B6S6L1_9HIV1 Gag protein (Fragment) OS=Human immunodef... 34 4.2
tr|Q0JDZ0|Q0JDZ0_ORYSJ Os04g0351300 protein OS=Oryza sativa subs... 33 5.3
tr|B8XJE4|B8XJE4_9HIV1 Gag protein OS=Human immunodeficiency vir... 33 5.5
tr|Q5S5C7|Q5S5C7_9HIV1 Gag polyprotein OS=Human immunodeficiency... 33 7.2
tr|O92294|O92294_9HIV1 Gag polyprotein OS=Human immunodeficiency... 33 7.2
tr|A9RAP3|A9RAP3_9HIV1 Gag polyprotein OS=Human immunodeficiency... 33 7.2
tr|A8XZC7|A8XZC7_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.2
tr|Q9YNZ4|Q9YNZ4_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 33 9.3
tr|Q8ACC0|Q8ACC0_9HIV1 Gag polyprotein OS=Human immunodeficiency... 33 9.3
tr|Q8ACB9|Q8ACB9_9HIV1 Gag polyprotein OS=Human immunodeficiency... 33 9.3
tr|Q80625|Q80625_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 33 9.3
tr|Q77804|Q77804_9HIV1 Gag polyprotein (Fragment) OS=Human immun... 33 9.3
tr|Q9XSV8|Q9XSV8_BOVIN SCO-spondin (Fragment) OS=Bos taurus GN=s... 33 9.3
tr|A7T0J9|A7T0J9_NEMVE Predicted protein OS=Nematostella vectens... 33 9.3
tr|A8P3A4|A8P3A4_COPC7 Predicted protein OS=Coprinopsis cinerea ... 33 9.3
>tr|Q2EFS2|Q2EFS2_9HIV1 Gag polyprotein (Fragment) OS=Human
immunodeficiency virus 1 GN=gag PE=4 SV=1
Length = 500
Score = 34.3 bits (77), Expect = 3.2
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTCR----TMICYAK 235
LG G +E+ +MT G G S AR + + NP I++Q R T+ C+
Sbjct: 335 LGPGATLEE-MMTACQGVGGPSHKARILAEAMSQVTNPANIMMQRGNFRNQRKTVKCFNC 393
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDL 112
K H CK K CW+CG +G D ++R N L
Sbjct: 394 GKEG-HIARNCKAPRKKGCWKCGK-EGHQMKDCTERQANFL 432
>tr|B6S6L2|B6S6L2_9HIV1 Gag protein (Fragment) OS=Human
immunodeficiency virus 1 GN=gag PE=4 SV=1
Length = 494
Score = 34.3 bits (77), Expect = 3.2
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTC----RTMICYAK 235
LG G +E+ +MT G G S AR + + N V I++Q RT+ C+
Sbjct: 335 LGPGASLEE-MMTACQGVGGPSHKARVLAEAMSKAANQVNIMMQKSNFKGPRRTIKCFNC 393
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIFHRTASR 82
K H C+ K CW+CG +G D ++R N L I+ R
Sbjct: 394 GKEG-HLARNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIWPSNKGR 442
>tr|B6S6L1|B6S6L1_9HIV1 Gag protein (Fragment) OS=Human
immunodeficiency virus 1 GN=gag PE=4 SV=1
Length = 494
Score = 33.9 bits (76), Expect = 4.2
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTC----RTMICYAK 235
LG G +E+ +MT G G S AR + + N V I++Q RT+ C+
Sbjct: 335 LGPGASLEE-MMTACQGVGGPSHKARVLAEAMSKAANHVNIMMQKSNFKGPRRTIKCFNC 393
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIFHRTASR 82
K H C+ K CW+CG +G D ++R N L I+ R
Sbjct: 394 GKEG-HLARNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIWPSNKGR 442
>tr|Q0JDZ0|Q0JDZ0_ORYSJ Os04g0351300 protein OS=Oryza sativa subsp.
japonica GN=Os04g0351300 PE=4 SV=1
Length = 1159
Score = 33.5 bits (75), Expect = 5.3
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 135 CCPSIAGLASCHTANKLCEILSCIHFDSAGMPCLW 239
C S G S TA K + L CI FDS G C+W
Sbjct: 209 CQTSHVGATSAKTAFKTAKDLFCIGFDSLGTGCIW 243
>tr|B8XJE4|B8XJE4_9HIV1 Gag protein OS=Human immunodeficiency virus
1 GN=gag PE=4 SV=1
Length = 501
Score = 33.5 bits (75), Expect = 5.5
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQ---IMTCRTMICYAKD 232
LG G +E+ +MT G G S AR + + NP I++Q +T+ C+
Sbjct: 339 LGPGATLEE-MMTACQGVGGPSHKARVLAEAMSQVTNPTTIMMQRGNFKQRKTIKCFNCG 397
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ K CW+CG +G D ++R N L I+
Sbjct: 398 KEG-HTARNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIW 439
>tr|Q5S5C7|Q5S5C7_9HIV1 Gag polyprotein OS=Human immunodeficiency
virus 1 GN=gag PE=4 SV=1
Length = 497
Score = 33.1 bits (74), Expect = 7.2
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = -2
Query: 393 LGQGNRIEQVLMTW--LCGQGESSA*ARKHRPRCPNPVEIVLQIMTCR----TMICYAKD 232
LG G +E+++ + G G + + + NPV I++Q R T+ C+
Sbjct: 337 LGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNPVNIMMQKGNFRNQRKTVKCFNCG 396
Query: 231 KACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ + CW+CG +G D ++R N L I+
Sbjct: 397 KEG-HIARNCRAPRKRGCWKCGK-EGHQMKDCTERQANFLGKIW 438
>tr|O92294|O92294_9HIV1 Gag polyprotein OS=Human immunodeficiency
virus 1 GN=gag PE=4 SV=1
Length = 500
Score = 33.1 bits (74), Expect = 7.2
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTCR----TMICYAK 235
LG +E+ +MT G G S AR + R PN I++Q R T+ C+
Sbjct: 337 LGPAATLEE-MMTACQGVGGPSHKARVLAEAMSRVPNSTNIMMQRGNYRNQRKTVKCFNC 395
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ K CW+CG +G D ++R N L I+
Sbjct: 396 GKEG-HIARNCRAPRKKGCWKCGK-EGHQMKDCTERQANFLGKIW 438
>tr|A9RAP3|A9RAP3_9HIV1 Gag polyprotein OS=Human immunodeficiency
virus 1 GN=gag PE=4 SV=1
Length = 500
Score = 33.1 bits (74), Expect = 7.2
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTCR----TMICYAK 235
LG +E+ +MT G G S AR + + N V I++Q R T+ C+
Sbjct: 337 LGPAATLEE-MMTACQGVGGPSHKARILAEAMSQATNSVNIMMQRGNFRSPRKTVKCFNC 395
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ + K CW+CG +G D S+R N L I+
Sbjct: 396 GKEG-HIAKNCRAPWKKGCWKCG-KEGHQMKDCSERQANFLGKIW 438
>tr|A8XZC7|A8XZC7_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG21157 PE=4 SV=2
Length = 141
Score = 33.1 bits (74), Expect = 7.2
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = -2
Query: 261 CRTMICYAKDKACLHYQ-----NGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIFH 97
C +C+ D AC N + ++A W + LC S N L S F
Sbjct: 61 CTIRLCHLCDPACQEITPPRSCNDSRANDYEAMWNSSSKVKNLCFPSPSTTENSLESNFS 120
Query: 96 RTASRMMRSLTFS 58
+T S + S+ FS
Sbjct: 121 QTFSALSNSMIFS 133
>tr|Q9YNZ4|Q9YNZ4_9HIV1 Gag polyprotein (Fragment) OS=Human
immunodeficiency virus 1 GN=gag PE=4 SV=1
Length = 206
Score = 32.7 bits (73), Expect = 9.3
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = -2
Query: 393 LGQGNRIEQVLMTWLCGQGESSA*AR---KHRPRCPNPVEIVLQIMTCR----TMICYAK 235
LG +E+ +MT G G S AR + + PN + I++Q R T+ C+
Sbjct: 98 LGPAATLEE-MMTACQGVGGPSHKARVLAEAMSQVPNSINIMMQRGNFRNQRKTVKCFNC 156
Query: 234 DKACLHYQNGCKTKFHKACWQCGNSQGQLC*DSSDRLPNDLVSIF 100
K H C+ K CW+CG +G D ++R N L I+
Sbjct: 157 GKEG-HIARNCRAPRKKGCWKCGK-EGHQMKDCAERQANFLGKIW 199
|