BP911887
Clone id YMU001_000010_D08
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCCTGCATTCTGCCCTCGCACTCTCTCTTTCCGCATTTCCACTTCTGAAGCAAGCGTTTC
TAGGGTTTCCTCTCCTACCTGCGTCACCTATCCTCACCGTCCCCGGCTACATCTGGAGAT
GCATTTTGCCTCGTAATCTTGCATCCTGCATTCTTGCAGGTTTGCCTTCTTCATTCGATC
GTGAACTGCCATCGTGAAGCCTGCCCCACTTCAGAAACAAAGACCGCCCTCTGGTGTTCA
ACGTGCATAATGCATGTGTGGATCCAATGAAATGCCGGAAAATATTTGCTAGAAGCAGTG
ATTTTGCAATGTCGCCATAGGTAGGCCTGATTGCTGTGACAGAATTAAAGTTTCTTGCCC
TTTGCCTTCTGTGCTGCTCGCCATGGCTTCCAAGGGTTCCTCTCTTCTACCTTCACACCT
GGTAAAGCTTTTAGATGCAGATGGCTATCACAAAGCTCGAGCCAATAACAATCATTATTA
C
■■Homology search results ■■ -
sp_hit_id P26024
Definition sp|P26024|NODC_BRAJA N-acetylglucosaminyltransferase OS=Bradyrhizobium japonicum
Align length 117
Score (bit) 31.2
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911887|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D08.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P26024|NODC_BRAJA N-acetylglucosaminyltransferase OS=Bradyrhi... 31 2.5
sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis GN=h PE... 30 4.3
sp|Q9VK71|PDM2B_DROME POU domain protein 2, isoform B OS=Drosoph... 30 5.7

>sp|P26024|NODC_BRAJA N-acetylglucosaminyltransferase
OS=Bradyrhizobium japonicum GN=nodC PE=3 SV=2
Length = 485

Score = 31.2 bits (69), Expect = 2.5
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +3

Query: 48 KQAFLGFPLLPASPILTVPGYIWRCILPRNLASCILA-GLPSSFDRELPS*SLPHFRNKD 224
+ FL + LLP + GY+ ++ +NL +LA ++ + L S+P +
Sbjct: 287 RDTFLAWRLLPE-----LDGYLTLDVIGQNLGPLLLAISSLAALAQLLIDGSIPWWTGLT 341

Query: 225 RPLVFNVHNACVDPMKCRKIFARSSDFAMSP*VGLIAVTELKFLALCLLCCSPWLPR 395
+ V CV ++ R++ R F++ + + + LK ALC L S WL R
Sbjct: 342 IAAMTTVR-CCVAALRAREL--RFIGFSLHTPINICLLLPLKAYALCTLSNSDWLSR 395


>sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis GN=h PE=2
SV=1
Length = 378

Score = 30.4 bits (67), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 7/28 (25%)
Frame = -3

Query: 443 HLHLKALP-------GVKVEERNPWKPW 381
H+HL+ P +KVEE PW+PW
Sbjct: 351 HMHLEQQPLSLVIKKQIKVEEEQPWRPW 378


>sp|Q9VK71|PDM2B_DROME POU domain protein 2, isoform B OS=Drosophila
melanogaster GN=pdm2 PE=2 SV=2
Length = 893

Score = 30.0 bits (66), Expect = 5.7
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +2

Query: 293 KQ*FCNVAIGRPDCCDRIKVSCPLPSVLLAMASKGSSLLPSHLVKLLDADGYHKARANNN 472
KQ F RP C P S L A + +G ++L ++ D GYH +NNN
Sbjct: 130 KQEFMESPPERPSCHPMNHQQAPANSAL-ATSCRGKTILNPWYLRPADGIGYHNYNSNNN 188

Query: 473 H 475
+
Sbjct: 189 N 189


tr_hit_id B8A6V0
Definition tr|B8A6V0|B8A6V0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 44
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911887|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D08.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8A6V0|B8A6V0_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9
tr|A0JRL1|A0JRL1_ARTS2 Putative uncharacterized protein OS=Arthr... 35 2.4
tr|Q476H9|Q476H9_RALEJ Cytochrome oxidase assembly OS=Ralstonia ... 34 3.2
tr|Q17I30|Q17I30_AEDAE Putative uncharacterized protein OS=Aedes... 33 5.4
tr|B7PW42|B7PW42_IXOSC Potassium-dependent sodium-calcium exchan... 33 7.0
tr|B6CWG8|B6CWG8_9VIRU Polyprotein OS=Tomato torrado virus PE=4 ... 33 9.2
tr|A9FVZ6|A9FVZ6_9RHOB Putative uncharacterized protein OS=Phaeo... 33 9.2
tr|B6KCY3|B6KCY3_TOXGO Zinc finger, ZZ type domain-containing pr... 33 9.2

>tr|B8A6V0|B8A6V0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03117 PE=4 SV=1
Length = 1012

Score = 35.0 bits (79), Expect = 1.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3

Query: 243 VHNACVDPMKCRKIFARSSDFAMSP*VGLIAVTELKFLALCLLC 374
V AC P + R A +SD M P +G++ +T L F+ +C++C
Sbjct: 655 VCRACETPDQKRPQVAFASDELMEPAIGILNITPLLFMKMCVIC 698


>tr|A0JRL1|A0JRL1_ARTS2 Putative uncharacterized protein
OS=Arthrobacter sp. (strain FB24) GN=Arth_0280 PE=4 SV=1
Length = 217

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1

Query: 70 LSYLRHLSSPSPATSGDAFCLVILHPAFLQVCLLHS 177
L YLRH++ A DAF L + PA L +CL H+
Sbjct: 65 LMYLRHIADHQAAGGADAFRLTLAEPAELPMCLEHA 100


>tr|Q476H9|Q476H9_RALEJ Cytochrome oxidase assembly OS=Ralstonia
eutropha (strain JMP134) GN=Reut_A0322 PE=4 SV=1
Length = 367

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 12/56 (21%)
Frame = -3

Query: 320 LWRHCKITASSKYFP-----AFHWIHTCIMHVE-------HQRAVFVSEVGQASRW 189
LWR +TA Y P A HW+H C V RA + +G ASRW
Sbjct: 246 LWRQLGMTADGDYIPHAALVAIHWVHRCFAVVVLGYLAWFGMRARRLEGLGSASRW 301


>tr|Q17I30|Q17I30_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL002490 PE=4 SV=1
Length = 258

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2

Query: 254 MCGSNEMPENIC*KQ*FCNVAIGRPDCCDRIKVSCPLPSVLLAMASKGSSLLPSHLVKLL 433
MC S+E+ E C N+ + R +C R++ S LP++ + ++ + L+P + ++
Sbjct: 110 MCSSSELMEFSCDPDCVFNIQMIRCECFQRVRTSPTLPTITTQVNTRTTPLMPGNCPSVI 169

Query: 434 D 436
+
Sbjct: 170 E 170


>tr|B7PW42|B7PW42_IXOSC Potassium-dependent sodium-calcium
exchanger, putative (Fragment) OS=Ixodes scapularis
GN=IscW_ISCW007235 PE=4 SV=1
Length = 468

Score = 33.1 bits (74), Expect = 7.0
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = -1

Query: 385 HGEQHRRQRARNFNSVTAIRPTYGDIAKSLLLANIFRHFIGSTHALCTLNTRGRSLFLKW 206
HGE +Q + + + R ++ L++A+ F FI S + C +N +
Sbjct: 218 HGESAHQQWRTHLHDAHSARHHRVNVKSGLMIASTF--FIFSLCSFCIMNFKDEVRISHS 275

Query: 205 GRLHDGSSRSNEEGKP 158
RL + S RSN GKP
Sbjct: 276 CRLGESSFRSNSGGKP 291


>tr|B6CWG8|B6CWG8_9VIRU Polyprotein OS=Tomato torrado virus PE=4
SV=1
Length = 1198

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2

Query: 311 VAIGRPDCCDRIKVSCPLPSVLLAMASKGSSLLPSHLVKLLDADGYHKARANNNHY 478
V + P+ D + V + + ++A A+KG L+P H++ D H NHY
Sbjct: 336 VDVELPENWDELSVRQQVAAAMIAFANKGVCLVPKHIIN-RDKHNIHLENITENHY 390


>tr|A9FVZ6|A9FVZ6_9RHOB Putative uncharacterized protein
OS=Phaeobacter gallaeciensis BS107 GN=RGBS107_02883 PE=4
SV=1
Length = 214

Score = 32.7 bits (73), Expect = 9.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Frame = -1

Query: 229 GRSLFLKWGRLHDGSSRSNEEGKPARMQDARLRGKMHLQM*PGTVRI-----------GD 83
G L++ WG G R++ E +PAR +D G + L + P I GD
Sbjct: 83 GYMLWIAWGLWRAGGLRASVEARPARFRD----GAVLLLLNPKAYVIIAVMFSQFLPPGD 138

Query: 82 AGRRGNPRNACFRSGNAER 26
AG GNP +G+ R
Sbjct: 139 AGAAGNPETINAATGDLAR 157


>tr|B6KCY3|B6KCY3_TOXGO Zinc finger, ZZ type domain-containing
protein OS=Toxoplasma gondii ME49 GN=TGME49_070300 PE=4
SV=1
Length = 520

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2

Query: 408 RREEPLEAMASSTEGKGQETLILSQQSGLPMATLQ 304
R +EP++AM S TE +E L S+ SG+P L+
Sbjct: 307 RGDEPIQAMESETEEMAEEELSSSRSSGIPAPPLE 341