BP911889
Clone id YMU001_000010_D10
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGAAAAGAAAGAAACTCCATGATCGATGCCCAACACAACAACAAAAAGACGACCAAATC
GCGCGGTGGTGACACTGAATCAAGAAATGACACCAAAGGCATGAAATTGGCAAACATGCT
ACACCAACGCACCAACAAAGCTCGTTGTCCACCCGCATCTTGCCCGACGACACATCTTTG
CAGCAGTAAATACCAGCATCTTGCCCACGATGCATCTCCATAGTAAATATCCATAGGGTA
ATCTATTGTTCCCCATTTTCAAGCTAGAAATCTTGTATAAACCAATTGTATATTGCCACC
TCTCTCTAGGTGATGGTCACATAGGCCCACCTAGGAGATATCATTTTAAAAACTCCTCCT
AAGACAAAGCAAGGGTAAACCATTTGGGACCCAACTCCTTGCTTTGTCTCTCCTGATTAG
GGCCCTAACCTAATCAAGATTATCCTAAACTATCGCAGCCTGCACCTATAAAAGGGCACT
AAGAGGTCACTATC
■■Homology search results ■■ -
sp_hit_id Q558Z9
Definition sp|Q558Z9|EXOC7_DICDI Exocyst complex component 7 OS=Dictyostelium discoideum
Align length 56
Score (bit) 30.8
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911889|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D10.
(494 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q558Z9|EXOC7_DICDI Exocyst complex component 7 OS=Dictyosteli... 31 3.5
sp|A1Z9E2|LIN54_DROME Protein lin-54 homolog OS=Drosophila melan... 30 4.6
sp|P78509|RELN_HUMAN Reelin OS=Homo sapiens GN=RELN PE=1 SV=2 30 6.0
sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris G... 30 6.0
sp|Q27995|NOS2_BOVIN Nitric oxide synthase, inducible OS=Bos tau... 30 7.9

>sp|Q558Z9|EXOC7_DICDI Exocyst complex component 7 OS=Dictyostelium
discoideum GN=exoc7 PE=3 SV=1
Length = 840

Score = 30.8 bits (68), Expect = 3.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2

Query: 50 TTKSRGGDTESRNDTKGMKLANMLHQRTNKARCPPASCPTTHLCSSKYQHLAHDAS 217
+TKS RN L Q TNK+ P ++ PT +S + +L AS
Sbjct: 63 STKSTSPTLPKRNSANLSLLQQQQQQHTNKSTSPSSNTPTATSTTSPFSYLGKQAS 118


>sp|A1Z9E2|LIN54_DROME Protein lin-54 homolog OS=Drosophila
melanogaster GN=mip120 PE=1 SV=1
Length = 950

Score = 30.4 bits (67), Expect = 4.6
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -1

Query: 170 SSGKMRVDNELCWCVGVACLPISCLWCHFLIQCHHRAIWSSFCCCVGHRS 21
+SG MR+ N+ C C CL C I C SS C CVG R+
Sbjct: 803 NSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPC------SSICKCVGCRN 846


>sp|P78509|RELN_HUMAN Reelin OS=Homo sapiens GN=RELN PE=1 SV=2
Length = 3460

Score = 30.0 bits (66), Expect = 6.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3

Query: 111 QTCYTNAPTKLVVHPHLARRH 173
Q C APT + VHPHLA H
Sbjct: 176 QLCEQGAPTDVTVHPHLAEIH 196


>sp|P42496|PHY_ADICA Phytochrome 1 OS=Adiantum capillus-veneris
GN=PHY1 PE=2 SV=2
Length = 1118

Score = 30.0 bits (66), Expect = 6.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3

Query: 174 CVVGQDAGGQRALLVRWCSMFANFMPLVSFLDSVSPP 64
C VGQD GQ+ +L R+ + ++ +V L+ + PP
Sbjct: 718 CFVGQDVTGQKLVLDRFIRIQGDYKAIVQSLNPLIPP 754


>sp|Q27995|NOS2_BOVIN Nitric oxide synthase, inducible OS=Bos taurus
GN=NOS2 PE=2 SV=3
Length = 1156

Score = 29.6 bits (65), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1

Query: 94 QRHEIGKHATPTHQQSSLSTRILPDDTSLQQ*IPASCPRCISIVN 228
+RH GKH + Q + + + P+ S P++CPR + I N
Sbjct: 45 KRHSPGKHGNESPQPLTGTVKTSPESLSKLDAPPSACPRHVRIKN 89


tr_hit_id A7PA60
Definition tr|A7PA60|A7PA60_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera
Align length 49
Score (bit) 33.9
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911889|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D10.
(494 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PA60|A7PA60_VITVI Chromosome chr14 scaffold_9, whole genome... 34 4.3
tr|B2IVD3|B2IVD3_NOSP7 Cytochrome b/b6, N-terminal domain protei... 33 5.6
tr|B2W2J9|B2W2J9_PYRTR Putative uncharacterized protein OS=Pyren... 33 5.6
tr|A8P5Z5|A8P5Z5_BRUMA Protein kinase domain containing protein ... 33 9.5
tr|A8P045|A8P045_BRUMA Putative uncharacterized protein (Fragmen... 33 9.5

>tr|A7PA60|A7PA60_VITVI Chromosome chr14 scaffold_9, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00037983001
PE=4 SV=1
Length = 124

Score = 33.9 bits (76), Expect = 4.3
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -1

Query: 143 ELCWCVGVA---CLPISCLWCHFLIQCHHRAIWSSFCCCVGHRSWSFFL 6
E+CW +G++ C +SC W F + C ++W C + FF+
Sbjct: 3 EICWLLGMSVGGCWQLSCWWWSFFLLCLSYSVWFGEFLCPVCSLFPFFI 51


>tr|B2IVD3|B2IVD3_NOSP7 Cytochrome b/b6, N-terminal domain protein
OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=Npun_R2785 PE=4 SV=1
Length = 220

Score = 33.5 bits (75), Expect = 5.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = -2

Query: 268 SSLKMGNNRLPYGYLLWRC--IVGKMLVFTA------AKMCRRARCGWTTSFVGALV 122
+SLKM N ++PYG+L WR I G ++ A + R+ R W T+++ ++
Sbjct: 48 NSLKMINTQVPYGWLFWRAHNIAGNAVIAIALIQIVVMFLSRQFRKSWLTAWISGIL 104


>tr|B2W2J9|B2W2J9_PYRTR Putative uncharacterized protein
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_03647 PE=4 SV=1
Length = 495

Score = 33.5 bits (75), Expect = 5.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2

Query: 286 IGLYKISSLKMGNNRLPYGYLLWRCIVGKMLVFTAAKMCRRARCGWTTSFVGAL 125
+ Y + + M + G ++ RC+VG L T A + R GW S +GAL
Sbjct: 414 LSAYVVDACGMYSASAMTGVIVTRCLVGTFLPLTTAPLAERLGYGWGFSCLGAL 467


>tr|A8P5Z5|A8P5Z5_BRUMA Protein kinase domain containing protein
OS=Brugia malayi GN=Bm1_17240 PE=4 SV=1
Length = 840

Score = 32.7 bits (73), Expect = 9.5
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1

Query: 91 HQRHEIGKHATPTHQQSSLSTR-ILPDDTSLQQ 186
H+RH GKH P +S L+ R +LPD S+Q+
Sbjct: 218 HKRHVSGKHQQPREHESRLAGRVVLPDSKSIQK 250


>tr|A8P045|A8P045_BRUMA Putative uncharacterized protein (Fragment)
OS=Brugia malayi GN=Bm1_13195 PE=4 SV=1
Length = 283

Score = 32.7 bits (73), Expect = 9.5
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1

Query: 91 HQRHEIGKHATPTHQQSSLSTR-ILPDDTSLQQ 186
H+RH GKH P +S L+ R +LPD S+Q+
Sbjct: 218 HKRHVSGKHQQPREHESRLAGRVVLPDSKSIQK 250