BP911890
Clone id YMU001_000010_D11
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAATAGCTTTGTGACATAAAATCCATTGTGAAACTCCTTTAGCTAGCTTTGGCTGCTGC
CACAAATGTCCATAATTCAAGAAGTAGCCATAAGCCTTCTTTCAAATCTTCTTGAACTCT
ACATCACTTCAATAATCTTGGTTCTCAAGTGTACCAAGATAGCGACCAATAATTGGCCAC
TCACCATCATACATAGACTCAGTAAATGCTTCAAACACTTGAGCAATAGAACCTCAATTA
GCATGAATGAGATGATGTATAGAAATTCAAACCCACATCATCACTCGTTGTTAGCATCTC
CTCGTCATCTTCATACCTAGCTCGAGACAACATGTCAACAACTGGATTATCTCTCCGGTA
ATGTGATGAATTTCATGGTTAAGTGTTTTAGTAAAAGCAATCCATGGAAGCATAGCAATA
TTTGCTATAGAACAAAGAGCAATCATCCCCAACACTGGCAAACAATCTGTCTCAACAATC
C
■■Homology search results ■■ -
sp_hit_id Q9N2V9
Definition sp|Q9N2V9|PDE6_CAEEL Probable 3',5'-cyclic phosphodiesterase pde-6 OS=Caenorhabditis elegans
Align length 89
Score (bit) 30.4
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911890|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D11.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9N2V9|PDE6_CAEEL Probable 3',5'-cyclic phosphodiesterase pde... 30 4.3
sp|Q09708|YAGG_SCHPO Uncharacterized protein C12G12.16c OS=Schiz... 30 5.6
sp|A7TMC5|ATG23_VANPO Autophagy-related protein 23 OS=Vanderwalt... 29 9.6

>sp|Q9N2V9|PDE6_CAEEL Probable 3',5'-cyclic phosphodiesterase pde-6
OS=Caenorhabditis elegans GN=pde-6 PE=2 SV=1
Length = 760

Score = 30.4 bits (67), Expect = 4.3
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3

Query: 180 LTIIHRLS-KCFKHLSNRTSISMN----EMMYRNSNPHHHSLLASPRHLHT*LETTCQQL 344
LT+ H + F LS I M EM+ H LA +H + +Q
Sbjct: 582 LTLQHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHV-TDVPEEQR 640

Query: 345 DYLSGNVMNFMVKCFSKSNPWKHSNICYR 431
D S + + +VKC SNP + +C R
Sbjct: 641 DTNSLTICDMLVKCADISNPAREWGLCQR 669


>sp|Q09708|YAGG_SCHPO Uncharacterized protein C12G12.16c
OS=Schizosaccharomyces pombe GN=SPAC12G12.16c PE=2 SV=1
Length = 496

Score = 30.0 bits (66), Expect = 5.6
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3

Query: 120 YITSIILVLKC-TKIATNNWPLTIIHRLSKCFKHLSNRTSISMNEMMYRNSNPHHHSLLA 296
YI + K T + +NN + IH + K F HLS+ T + + + + R N L A
Sbjct: 417 YIKKFLTAKKLFTDLPSNNELFSFIHNIPKEFLHLSDSTYLDLEKQVLRIFNVQIEELDA 476

Query: 297 -SPRHLHT*LE 326
+P + H LE
Sbjct: 477 KTPWYYHYELE 487


>sp|A7TMC5|ATG23_VANPO Autophagy-related protein 23
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=ATG23 PE=3 SV=1
Length = 491

Score = 29.3 bits (64), Expect = 9.6
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3

Query: 72 IIQEVAISLLSNLLELYITSIILVLKCTKIATNNWPLT--IIHRLSKCFKHLSNRTSISM 245
II I LL NL+E +LV ++ N P+ I +SK + +N T+I+
Sbjct: 368 IIDSTDIQLLRNLIEN--EKKVLVQATNELKLNLTPVNSKINDSISKSINN-NNNTNITT 424

Query: 246 NEMMYRNSNPHHHSLLAS 299
N + N+N + +SLL S
Sbjct: 425 NTSINNNNNTNENSLLDS 442


tr_hit_id A9SEB1
Definition tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 41
Score (bit) 54.3
E-value 3.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911890|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_D11.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 3e-06
tr|B3L4A0|B3L4A0_PLAKH Putative uncharacterized protein OS=Plasm... 35 1.9
tr|B6AFA4|B6AFA4_9CRYT HEAT repeat family protein OS=Cryptospori... 35 2.4
tr|B8LUE4|B8LUE4_9EURO Putative uncharacterized protein OS=Talar... 34 3.2
tr|B6N423|B6N423_BRAFL Putative uncharacterized protein OS=Branc... 34 4.1
tr|B6N407|B6N407_BRAFL Putative uncharacterized protein OS=Branc... 34 4.1
tr|B3S0A7|B3S0A7_TRIAD Putative uncharacterized protein OS=Trich... 33 7.0

>tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_46806 PE=4 SV=1
Length = 75

Score = 54.3 bits (129), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -3

Query: 479 IVETDCLPVLGMIALCSIANIAMLPWIAFTKTLNHEIHHIT 357
++ETDCLP+LGMI S +IAML WIA+ K+LN E H+T
Sbjct: 24 VIETDCLPLLGMITNWSTPDIAMLRWIAYIKSLNLEFKHVT 64


>tr|B3L4A0|B3L4A0_PLAKH Putative uncharacterized protein OS=Plasmodium
knowlesi (strain H) GN=PKH_083030 PE=4 SV=1
Length = 1394

Score = 35.0 bits (79), Expect = 1.9
Identities = 24/131 (18%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Frame = +3

Query: 84 VAISLLSNLLELYITSIILVLKCTKIATNNWPLTIIHRLSKCFKHLSNRTSISMNEM--- 254
+ + + L +L++ + ++ + + + + PL + ++KC NR + S++ +
Sbjct: 720 IILMMNKQLAKLFL--LFVINSFSTVRSGHSPLHVFDCVNKCVNEGENRVTRSLDRVKST 777

Query: 255 MYRNSNPHHHSLLASPRHLHT*LETTCQQLDYLSGNVMNFMVKCFSKSNPWKHSNICYRT 434
+Y H S + H+ + ++++ G+ ++ V+ F+K N W HS +
Sbjct: 778 LYDREMIRAHETDQSDQSDHS--GPSPSEMEFPFGDTLS--VRFFTKENLWIHSQVLQTY 833

Query: 435 KSNHPQHWQTI 467
HPQ + +
Sbjct: 834 AQKHPQEYAAV 844


>tr|B6AFA4|B6AFA4_9CRYT HEAT repeat family protein
OS=Cryptosporidium muris RN66 GN=CMU_032800 PE=4 SV=1
Length = 2752

Score = 34.7 bits (78), Expect = 2.4
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3

Query: 87 AISLLSNLLEL-YITSIILVLKCTKIATNNWPLTIIHRLSKCFKHLSNRTSISMNEMM 257
+I + L+EL ++ I L T++ +NNW T I L ++LSN TSIS+N+++
Sbjct: 588 SIDRYNRLIELDFLLDIANYLDSTQLNSNNWRCTYI--LKCMIEYLSNSTSISLNKLI 643


>tr|B8LUE4|B8LUE4_9EURO Putative uncharacterized protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_071200 PE=4
SV=1
Length = 351

Score = 34.3 bits (77), Expect = 3.2
Identities = 26/94 (27%), Positives = 38/94 (40%)
Frame = +3

Query: 126 TSIILVLKCTKIATNNWPLTIIHRLSKCFKHLSNRTSISMNEMMYRNSNPHHHSLLASPR 305
T IIL+ C + NW I S H N+ + EM+ R + S L SP
Sbjct: 94 TQIILLFDCEHVTACNWRKRFIS--SSVQDHSINKDMSGLEEMLQRERS-LLASFLCSPL 150

Query: 306 HLHT*LETTCQQLDYLSGNVMNFMVKCFSKSNPW 407
H HT T Q ++ +++ + KS W
Sbjct: 151 HRHTKSPTLWQHRLWILTKLLDLQEQAAVKSEIW 184


>tr|B6N423|B6N423_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_125867 PE=4 SV=1
Length = 1346

Score = 33.9 bits (76), Expect = 4.1
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3

Query: 72 IIQEVAISLLSNLLELY--ITSIILVLKCTKIATNNWPLTIIHRLSKCFKHLSNRTSISM 245
+++ V + L +LE Y I S+I L C+ ++ N W +++ L + FK ++ M
Sbjct: 634 VLKVVGLVLRQQVLEFYEEILSLIYSLTCSSVSQNMWQ--VLYLLYENFKEVAFDYFTEM 691

Query: 246 NEMMYRNSNPHHHSLLASPRHL 311
++ + L+SP+HL
Sbjct: 692 MPCLHNYITVDTQAFLSSPKHL 713


>tr|B6N407|B6N407_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_125858 PE=4 SV=1
Length = 980

Score = 33.9 bits (76), Expect = 4.1
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3

Query: 72 IIQEVAISLLSNLLELY--ITSIILVLKCTKIATNNWPLTIIHRLSKCFKHLSNRTSISM 245
+++ V + L +LE Y I S+I L C+ ++ N W +++ L + FK ++ M
Sbjct: 571 VLKVVGLVLRQQVLEFYEEILSLIYSLTCSSVSQNMWQ--VLYLLYENFKEVAFDYFTEM 628

Query: 246 NEMMYRNSNPHHHSLLASPRHL 311
++ + L+SP+HL
Sbjct: 629 MPCLHNYITVDTQAFLSSPKHL 650


>tr|B3S0A7|B3S0A7_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_57745 PE=4 SV=1
Length = 441

Score = 33.1 bits (74), Expect = 7.0
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +3

Query: 96 LLSNLLELYITSIILVLKCTK---IATNNWPLTIIHRLSKCFKHLSNRTSISMNEMMYRN 266
L S+ LY T L T+ I+ N+ LT ++ L L N++++SMN RN
Sbjct: 67 LSSSFRSLYKTVFSLDNSITENGTISGNDQVLTAVNNLGSS---LDNQSTVSMNSYDSRN 123

Query: 267 SNPHHHSLLASPRHLHT*LETTCQQLDYLSGNVMNFMVKCFSKSNPWKHSNICYRTKSN 443
S+ LASP+H H QQ N M+ + S +P+ N KS+
Sbjct: 124 SS------LASPQHHHQQHHHHQQQQQQQQRNPMSLHQQSSSIESPFIEPNGSINLKSS 176