BP911893 |
Clone id |
YMU001_000010_E03 |
Library |
YMU01 |
Length |
524 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_E03. |
Accession |
BP911893 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2579Contig1 |
Sequence |
GACCTGGATTAATGGAGAGGGAGGTGAACTCGTGTGGGCAGCAGGTTCAATTTAGTAGGT GTATAGCTACACAAAGCAGCAATGGCAGTTTAGGTCCTGGAAGACCTTCAAATAGCACTC TGGAAACAGAGAAAGTCTTTAGGAATGGGTCTCTAGCTTATGAACATGTAAAAAAGGCAG AAGAGGAGTCCGGAACTTATGTACAGAATCTCTCCACTCTTGATTATAAAACATGTGGGG CCATCAAAAGGCAGATTGCGATAGAAGATCAACATGCTGTGCGTGCAAAGAAATATCGGG ATATGCAACCATCAAGTAGTCCAGAATTGTCTAAGACTGGTTTCCTGAGTGCAAGGTTAC CAGCTAGTGCCAAGCCTCAGAGAAGATGAAGGTTATGTCTTGTTAATTGTAAGATTTGTG AAAAGGGGTTTAGAGTAGTTAATGCAGTTTGCTGCCTAGCAGTCTTCAGCAATTTTGTAA AGATATGCCATCCGCGGGAGCCAATATTTCCCGGTCGTATGTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9R037 |
Definition |
sp|Q9R037|WDR44_RAT WD repeat-containing protein 44 OS=Rattus norvegicus |
Align length |
106 |
Score (bit) |
34.3 |
E-value |
0.37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8T1B3 |
Definition |
tr|Q8T1B3|Q8T1B3_DICDI Similar to Arabidopsis thaliana (Mouse-ear cress). Putative GTPase activating protein OS=Dictyostelium discoideum |
Align length |
153 |
Score (bit) |
34.7 |
E-value |
3.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911893|Adiantum capillus-veneris mRNA, clone: YMU001_000010_E03. (524 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8T1B3|Q8T1B3_DICDI Similar to Arabidopsis thaliana (Mouse-ea... 35 3.0 tr|Q553M5|Q553M5_DICDI Pleckstrin homology (PH) domain-containin... 35 3.0 tr|Q6D2A3|Q6D2A3_ERWCT Putative protease OS=Erwinia carotovora s... 34 3.9 tr|A0CEB8|A0CEB8_PARTE Chromosome undetermined scaffold_170, who... 34 3.9 tr|Q7CJL2|Q7CJL2_YERPE Putative protease OS=Yersinia pestis GN=Y... 33 6.6 tr|Q668C0|Q668C0_YERPS Putative protease OS=Yersinia pseudotuber... 33 6.6 tr|Q1CK67|Q1CK67_YERPN Protease OS=Yersinia pestis bv. Antiqua (... 33 6.6 tr|Q1C5L3|Q1C5L3_YERPA Putative protease OS=Yersinia pestis bv. ... 33 6.6 tr|B2K9M6|B2K9M6_YERPB Peptidase U32 OS=Yersinia pseudotuberculo... 33 6.6 tr|B1JSC8|B1JSC8_YERPY Peptidase U32 OS=Yersinia pseudotuberculo... 33 6.6 tr|A9QZU3|A9QZU3_YERPG Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|A7FG11|A7FG11_YERP3 Peptidase, U32 family OS=Yersinia pseudot... 33 6.6 tr|A4TMR8|A4TMR8_YERPP Protease OS=Yersinia pestis (strain Pesto... 33 6.6 tr|A1JKV9|A1JKV9_YERE8 Putative protease OS=Yersinia enterocolit... 33 6.6 tr|B0MPN8|B0MPN8_9FIRM Putative uncharacterized protein OS=Eubac... 33 6.6 tr|B0HP60|B0HP60_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|B0HHP4|B0HHP4_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|B0H4P5|B0H4P5_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|B0GV13|B0GV13_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|B0GCW5|B0GCW5_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|A9ZYM4|A9ZYM4_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|A9Z6B3|A9Z6B3_YERPE Peptidase, U32 family OS=Yersinia pestis ... 33 6.6 tr|A6BNW1|A6BNW1_YERPE Putative protease OS=Yersinia pestis CA88... 33 6.6 tr|A9SZZ8|A9SZZ8_PHYPA Sensory histidine protein kinase OS=Physc... 33 6.6 tr|A7MB14|A7MB14_BOVIN GIGYF2 protein OS=Bos taurus GN=GIGYF2 PE... 33 6.6 tr|A1CUK3|A1CUK3_ASPCL Putative uncharacterized protein OS=Asper... 33 6.6 tr|Q7N3D7|Q7N3D7_PHOLL Similar to putative protease YegQ of Esch... 33 8.6 tr|A7MHI6|A7MHI6_ENTS8 Putative uncharacterized protein OS=Enter... 33 8.6
>tr|Q8T1B3|Q8T1B3_DICDI Similar to Arabidopsis thaliana (Mouse-ear cress). Putative GTPase activating protein OS=Dictyostelium discoideum PE=4 SV=2 Length = 545
Score = 34.7 bits (78), Expect = 3.0 Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Frame = +3
Query: 18 REVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEESGT 197 ++V S G ++ + NGSL PG PS+ST ++ +E +G Sbjct: 188 KKVGSNGGSPSVNKMLTPNKINGSLAPGSPSSSTFDSSSA-------------DDEMNGF 234
Query: 198 YVQNLSTLDYKTCGAIKRQIAIEDQHAVRAKKYRDMQPSSSPELSKT---GFLSARLPAS 368 L K K++ + +Q ++ K ++ Q +S E K+ F SA++ S Sbjct: 235 KKGYLGVQGGKLISKWKQRWVVLNQESISIYKSQEQQETSKKEPKKSIQIIFCSAKVVKS 294
Query: 369 AKPQRR*RLCLVNCKI---CEKGFRVVNAVCCL 458 + ++ + + C G +++N + C+ Sbjct: 295 TNDKYTFQVLTTDKTLHFSCVSGSQMLNWITCI 327
>tr|Q553M5|Q553M5_DICDI Pleckstrin homology (PH) domain-containing protein OS=Dictyostelium discoideum GN=DDB_0217683 PE=4 SV=2 Length = 545
Score = 34.7 bits (78), Expect = 3.0 Identities = 32/153 (20%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Frame = +3
Query: 18 REVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEESGT 197 ++V S G ++ + NGSL PG PS+ST ++ +E +G Sbjct: 188 KKVGSNGGSPSVNKMLTPNKINGSLAPGSPSSSTFDSSSA-------------DDEMNGF 234
Query: 198 YVQNLSTLDYKTCGAIKRQIAIEDQHAVRAKKYRDMQPSSSPELSKT---GFLSARLPAS 368 L K K++ + +Q ++ K ++ Q +S E K+ F SA++ S Sbjct: 235 KKGYLGVQGGKLISKWKQRWVVLNQESISIYKSQEQQETSKKEPKKSIQIIFCSAKVVKS 294
Query: 369 AKPQRR*RLCLVNCKI---CEKGFRVVNAVCCL 458 + ++ + + C G +++N + C+ Sbjct: 295 TNDKYTFQVLTTDKTLHFSCVSGSQMLNWITCI 327
>tr|Q6D2A3|Q6D2A3_ERWCT Putative protease OS=Erwinia carotovora subsp. atroseptica GN=ECA3193 PE=4 SV=1 Length = 454
Score = 34.3 bits (77), Expect = 3.9 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E +V+ G V IA ++ +LG G+P++ E+ R G E++ E+E Sbjct: 203 VQEGKVDEVGNIVHQHEPIAVKNVEPALGIGQPTDKVFMLEESMRPG----EYMSAFEDE 258
Query: 189 SGTYVQN 209 GTY+ N Sbjct: 259 HGTYIMN 265
>tr|A0CEB8|A0CEB8_PARTE Chromosome undetermined scaffold_170, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00037571001 PE=4 SV=1 Length = 520
Score = 34.3 bits (77), Expect = 3.9 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Frame = +3
Query: 51 FSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAY--EHVKKAEEESGTYVQNLSTLD 224 ++R + QSS L P +S + T K+ N Y E+++K +EE Y++N+ Sbjct: 195 YTRTTSVQSSRPFLSPKTQKSSFIFTSKIKMNKQEKYFIENMEKCQEELQNYIENMHNQL 254
Query: 225 YKTCGAIKRQIAIEDQHAVRAKKYRDMQPSSSPELSK 335 + +K+ I DQ K R + S LSK Sbjct: 255 SQKTDDVKKIIKFYDQIQYPTPKSRAFE---SKTLSK 288
>tr|Q7CJL2|Q7CJL2_YERPE Putative protease OS=Yersinia pestis GN=YPO2855 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
>tr|Q668C0|Q668C0_YERPS Putative protease OS=Yersinia pseudotuberculosis GN=YPTB2820 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
>tr|Q1CK67|Q1CK67_YERPN Protease OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_1283 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
>tr|Q1C5L3|Q1C5L3_YERPA Putative protease OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=YPA_2294 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
>tr|B2K9M6|B2K9M6_YERPB Peptidase U32 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=YPTS_2926 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
>tr|B1JSC8|B1JSC8_YERPY Peptidase U32 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=YPK_1325 PE=4 SV=1 Length = 464
Score = 33.5 bits (75), Expect = 6.6 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +3
Query: 9 LMEREVNSCGQQVQFSRCIATQSSNGSLGPGRPSNSTLETEKVFRNGSLAYEHVKKAEEE 188 + E + + G V + IA ++ +LG G P++ E+ R G E++ +E+E Sbjct: 213 VQEGKEDDVGNIVHIHQPIAVKNVEPTLGIGAPTDKVFVIEEAQRPG----EYMTASEDE 268
Query: 189 SGTYVQNLSTL 221 GTY+ N L Sbjct: 269 HGTYIMNSKDL 279
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