BP911903 |
Clone id |
YMU001_000010_F06 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_F06. |
Accession |
BP911903 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGCATCAGTATTGCAACCTACATTTGTTCCAGTTGATGGATTAGGGAAAGTGCCGTTTTC TTCTGTTCGAAGTCCGCGACCACTGCTTGAAGTTGATGATTTTGTCTCTCAGACTGGATG TACTTCACTCAAGCGGTCAGAATGCCCATTGGAGCAAGAGCCAATGCTAGCAGCCAGAAT AGCTATTGAAGATGGTTTGTGCCGTCTCTTGGATGTGGATGACATTGATAGGTTTTTAAG GGCGACACAGCCTCCTGATGGTGGAGCTGAATTGCAACGGCAAAGACAATTATTGCTGGA AGAACTAGCTGTCTCATTGCAGCTTTTGGAACCCTCAAACACAAAACGGGAGAACGGCAC AGGTTCAACAGAGAATAATGCGCACTTGGCAGAAACAGATACCAAAGATTTGGTATTTTT GCACATTGTTTCATTCCCAAAAGGGCGCAAACTTCTTTCTCGATACCTCGAGCTTTTCCC GGAAGGTAGTCAGCTAGTTCATAGAGTCTGCTTAATTATTTTCCGTTACCTCCAGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O58417 |
Definition |
sp|O58417|PORB_PYRHO Pyruvate synthase subunit porB OS=Pyrococcus horikoshii |
Align length |
74 |
Score (bit) |
35.4 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PWT9 |
Definition |
tr|A7PWT9|A7PWT9_VITVI Chromosome chr19 scaffold_35, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
172 |
Score (bit) |
143.0 |
E-value |
6.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911903|Adiantum capillus-veneris mRNA, clone: YMU001_000010_F06. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PWT9|A7PWT9_VITVI Chromosome chr19 scaffold_35, whole genom... 143 6e-33 tr|Q6K5C7|Q6K5C7_ORYSJ Putative uncharacterized protein OSJNBa00... 139 1e-31 tr|Q0E1W8|Q0E1W8_ORYSJ Os02g0294700 protein (Fragment) OS=Oryza ... 139 1e-31 tr|B8AFW0|B8AFW0_ORYSI Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|A3A5T3|A3A5T3_ORYSJ Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|A2X3P2|A2X3P2_ORYSI Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|Q6K5B7|Q6K5B7_ORYSJ cDNA clone:J023054B07, full insert sequen... 137 4e-31 tr|A7Q641|A7Q641_VITVI Chromosome undetermined scaffold_55, whol... 137 4e-31 tr|A5C725|A5C725_VITVI Putative uncharacterized protein OS=Vitis... 136 6e-31 tr|A9TXP4|A9TXP4_PHYPA Predicted protein OS=Physcomitrella paten... 135 2e-30 tr|Q5ZAQ3|Q5ZAQ3_ORYSJ cDNA clone:J023089F03, full insert sequen... 129 1e-28 tr|Q0JIZ5|Q0JIZ5_ORYSJ Os01g0769000 protein OS=Oryza sativa subs... 129 1e-28 tr|A2ZY79|A2ZY79_ORYSJ Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|A2WVH2|A2WVH2_ORYSI Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|Q64M88|Q64M88_ORYSJ Os02g0517300 protein OS=Oryza sativa subs... 129 1e-28 tr|A3A7D3|A3A7D3_ORYSJ Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|A2X5D4|A2X5D4_ORYSI Putative uncharacterized protein OS=Oryza... 129 1e-28 tr|Q0WPK4|Q0WPK4_ARATH Putative uncharacterized protein At1g7909... 127 3e-28 tr|O64542|O64542_ARATH YUP8H12R.29 protein OS=Arabidopsis thalia... 127 3e-28 tr|Q56X08|Q56X08_ARATH Putative uncharacterized protein At1g7909... 126 8e-28 tr|Q9LHJ0|Q9LHJ0_ARATH Arabidopsis thaliana genomic DNA, chromos... 106 7e-22 tr|Q0WPV0|Q0WPV0_ARATH Putative uncharacterized protein At3g2227... 106 7e-22 tr|Q94C98|Q94C98_ARATH Putative uncharacterized protein At4g1499... 98 3e-19 tr|Q0WLS5|Q0WLS5_ARATH Putative uncharacterized protein At4g1499... 87 5e-16 tr|O23352|O23352_ARATH Putative uncharacterized protein dl3535c ... 86 1e-15 tr|Q00ZQ0|Q00ZQ0_OSTTA Homology to unknown gene (Fragment) OS=Os... 86 2e-15 tr|A4S3Z6|A4S3Z6_OSTLU Predicted protein OS=Ostreococcus lucimar... 84 4e-15 tr|B7ZYG5|B7ZYG5_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15 tr|A7PWV5|A7PWV5_VITVI Chromosome chr19 scaffold_35, whole genom... 49 1e-04 tr|A8J8Z9|A8J8Z9_CHLRE Predicted protein OS=Chlamydomonas reinha... 45 0.002
>tr|A7PWT9|A7PWT9_VITVI Chromosome chr19 scaffold_35, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025770001 PE=4 SV=1 Length = 718
Score = 143 bits (360), Expect = 6e-33 Identities = 87/172 (50%), Positives = 101/172 (58%), Gaps = 1/172 (0%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQT-GCTSLKRSECPLEQEPMLAARIAIEDGL 199 F+ VD LG+VPFSS+R PRPLLEVD S G T K SE PLEQEPMLAAR+ IEDGL Sbjct: 363 FLQVDALGRVPFSSIRRPRPLLEVDPPNSSVAGSTEQKVSEKPLEQEPMLAARVTIEDGL 422
Query: 200 CRLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENN 379 C LLDVDDIDRFL+ Q DGG P G + Sbjct: 423 CLLLDVDDIDRFLQFNQLQDGGTQLRRRRQNLLEGLAASLQLVDP--------LGKPGHT 474
Query: 380 AHLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 LA D DLVFL +VS PKGRKLLS+YL+L +L+ VC+ IFR+L+ Sbjct: 475 VGLAPKD--DLVFLRLVSLPKGRKLLSKYLQLLFPAVELIRIVCMAIFRHLR 524
>tr|Q6K5C7|Q6K5C7_ORYSJ Putative uncharacterized protein OSJNBa0073G17.2 OS=Oryza sativa subsp. japonica GN=OSJNBa0073G17.2 PE=4 SV=1 Length = 657
Score = 139 bits (349), Expect = 1e-31 Identities = 80/171 (46%), Positives = 100/171 (58%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 308 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 367
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NNA Sbjct: 368 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNA 418
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 419 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 467
>tr|Q0E1W8|Q0E1W8_ORYSJ Os02g0294700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0294700 PE=4 SV=1 Length = 688
Score = 139 bits (349), Expect = 1e-31 Identities = 80/171 (46%), Positives = 100/171 (58%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 339 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 398
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NNA Sbjct: 399 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNA 449
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 450 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 498
>tr|B8AFW0|B8AFW0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06835 PE=4 SV=1 Length = 830
Score = 139 bits (349), Expect = 1e-31 Identities = 80/171 (46%), Positives = 100/171 (58%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 481 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 540
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NNA Sbjct: 541 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNA 591
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 592 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 640
>tr|A3A5T3|A3A5T3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006155 PE=4 SV=1 Length = 898
Score = 139 bits (349), Expect = 1e-31 Identities = 80/171 (46%), Positives = 100/171 (58%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 549 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 608
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NNA Sbjct: 609 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNA 659
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 660 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 708
>tr|A2X3P2|A2X3P2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06832 PE=4 SV=1 Length = 898
Score = 139 bits (349), Expect = 1e-31 Identities = 80/171 (46%), Positives = 100/171 (58%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 549 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 608
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NNA Sbjct: 609 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNA 659
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 660 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 708
>tr|Q6K5B7|Q6K5B7_ORYSJ cDNA clone:J023054B07, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0073G17.27 PE=2 SV=1 Length = 830
Score = 137 bits (345), Expect = 4e-31 Identities = 79/171 (46%), Positives = 99/171 (57%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVDDFVSQTGCTSLKRSECPLEQEPMLAARIAIEDGLC 202 ++ VD LG++PFSS+R PRPLL+V+ + + K + L+QEPMLAARI IEDGLC Sbjct: 481 YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC 540
Query: 203 RLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGSTENNA 382 LLDVDDIDR L+ +Q DGG P + NN Sbjct: 541 LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPL---------TPSNNG 591
Query: 383 HLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 L+ D DLVFL IVS PKGRKLLSRYLEL GS+L C+ +FR+L+ Sbjct: 592 PLSPND--DLVFLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLR 640
>tr|A7Q641|A7Q641_VITVI Chromosome undetermined scaffold_55, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031223001 PE=4 SV=1 Length = 774
Score = 137 bits (345), Expect = 4e-31 Identities = 84/176 (47%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Frame = +2
Query: 14 QPTFVPVDGLGKVPFSSVRSPRPLLEVDD--FVSQTGCTSLKRSECPLEQEPMLAARIAI 187 Q + +PVD LG++ FSS+R PRPLLEVD S G T + PLEQEPMLAARIAI Sbjct: 434 QHSHLPVDALGRIAFSSIRRPRPLLEVDSPSSGSNDGSTEQNVTVKPLEQEPMLAARIAI 493
Query: 188 EDGLCRLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGS 367 EDGLC LLDVDDIDR L+ + P DGG P G Sbjct: 494 EDGLCLLLDVDDIDRVLQFSPPQDGGIQLRRKRQMLLEGLAASLQLVDP--------LGK 545
Query: 368 TENNAHLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 + + LA D DLVFL +VS PKGRKLL RY++L G +L VC+ IFR+L+ Sbjct: 546 SGHAVGLAPND--DLVFLRLVSLPKGRKLLFRYIQLLFPGGELARIVCMAIFRHLR 599
>tr|A5C725|A5C725_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033604 PE=4 SV=1 Length = 867
Score = 136 bits (343), Expect = 6e-31 Identities = 83/176 (47%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Frame = +2
Query: 14 QPTFVPVDGLGKVPFSSVRSPRPLLEVDD--FVSQTGCTSLKRSECPLEQEPMLAARIAI 187 Q + +PVD LG++ FSS+R PRPLLEV+ S G T + PLEQEPMLAARIAI Sbjct: 510 QHSHLPVDALGRIAFSSIRRPRPLLEVBSPSSGSNDGSTEQNVTVKPLEQEPMLAARIAI 569
Query: 188 EDGLCRLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRENGTGS 367 EDGLC LLDVDDIDR L+ + P DGG P G Sbjct: 570 EDGLCLLLDVDDIDRVLQFSPPQDGGIQLRRKRQMLLEGLAASLQLVDP--------LGK 621
Query: 368 TENNAHLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYLQ 535 + + LA D DLVFL +VS PKGRKLL RY++L G +L VC+ IFR+L+ Sbjct: 622 SGHAVGLAPND--DLVFLRLVSLPKGRKLLFRYIQLLFPGGELARIVCMAIFRHLR 675
>tr|A9TXP4|A9TXP4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199285 PE=4 SV=1 Length = 439
Score = 135 bits (339), Expect = 2e-30 Identities = 81/181 (44%), Positives = 100/181 (55%), Gaps = 10/181 (5%) Frame = +2
Query: 23 FVPVDGLGKVPFSSVRSPRPLLEVD----------DFVSQTGCTSLKRSECPLEQEPMLA 172 ++ VD LG+VP+SS+R PRPLLEVD D ++ S+ PLEQEPMLA Sbjct: 68 YLQVDALGRVPYSSIRRPRPLLEVDPAPADGMSMSDHINGNIGVDGMPSQRPLEQEPMLA 127
Query: 173 ARIAIEDGLCRLLDVDDIDRFLRATQPPDGGAXXXXXXXXXXXXXXXXXXXXXPSNTKRE 352 ARIAIEDGLC LLDVDDIDR L Q PDGGA P + Sbjct: 128 ARIAIEDGLCLLLDVDDIDRLLAVQQHPDGGAQLRRRRQILLEGLASSLQLADPLGNTSD 187
Query: 353 NGTGSTENNAHLAETDTKDLVFLHIVSFPKGRKLLSRYLELFPEGSQLVHRVCLIIFRYL 532 G N + DLVFL +VS PKG+KLL+RYL+L GS+L VC+ + R+L Sbjct: 188 LG-NRILNGQFVGLNPKDDLVFLRLVSLPKGKKLLTRYLQLLSPGSELGQIVCMAVCRHL 246
Query: 533 Q 535 + Sbjct: 247 R 247
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