BP911910
Clone id YMU001_000010_G03
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGGATGGAAAAGATGGAGAGGCAGGCCATGTTGGAAGTGGAATATAAAGAGCAGCATAG
GGAAGCATTGAAGAAAGCTACTTCTTTGAATGCTTCTTGTGCTTTTCCTAGTTATGGGAC
TTTTGGCAAAGGTGCTTGGGGAAAGGGAGAGAGTGAGAGTTTTGCTGCCGACAAGTCAAA
GCAGCATGGTGGCAGAGCAAAGTCCCTTGACAGAACAACAATGGAGGAAGCTACAAGCAG
TTTAGTGCAAAGTACTTGAGCCTAACAAGCTAGTAAAGGAGGAACTGAGGAAGCAAAAAT
GCCATTTGGTTTTGCAGCTCACTTTCAACACTTCAGAGGATATGCTTCAAATGGGGCTCT
ATAGAGTGTAGGTCAATCATCCTTTCACATATTATTTGCCATCAAATAACCACCTGTAAA
AGGAAGTGCCTTTTTGTCTTGGGTGGGGTGCCAGAGAGACTAAAGCTTAAAGAGGGAGAA
AAGTGAAACGTGCCTTTAAAAATTTGAAGG
■■Homology search results ■■ -
sp_hit_id Q9CZX2
Definition sp|Q9CZX2|CC123_MOUSE Coiled-coil domain-containing protein 123, mitochondrial OS=Mus musculus
Align length 37
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911910|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G03.
(510 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CZX2|CC123_MOUSE Coiled-coil domain-containing protein 123,... 32 1.3
sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo sap... 32 1.7
sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2 30 6.5

>sp|Q9CZX2|CC123_MOUSE Coiled-coil domain-containing protein 123,
mitochondrial OS=Mus musculus GN=Ccdc123 PE=2 SV=1
Length = 791

Score = 32.3 bits (72), Expect = 1.3
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3

Query: 189 VAEQSPLTEQQWRKLQAV*CKVLEPNKLVKEELRKQK 299
+ ++SP+T ++WR+LQ VL+ NKL+ E+L Q+
Sbjct: 412 LTKRSPVTVEEWRQLQTQAELVLDENKLLIEQLEIQQ 448


>sp|Q8TE96|DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS=Homo
sapiens GN=DQX1 PE=2 SV=2
Length = 717

Score = 32.0 bits (71), Expect = 1.7
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = -1

Query: 312 KPNGIFASSVPP---LLAC*AQV-LCTKLLVASSIVVLSRDFALPPCCFDLS--AAKLSL 151
+P+ I+ ++PP AC A + LC K L +V L + + CC LS L L
Sbjct: 231 RPSPIYWDTIPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLL 290

Query: 150 SPFPQAPLPKVP*LGKAQEAFKE 82
P LP P G+A +A E
Sbjct: 291 QGLPPRVLPLHPDCGRAVQAVYE 313


>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2
Length = 8797

Score = 30.0 bits (66), Expect = 6.5
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Frame = -1

Query: 213 LSRDFALPPCCFDLSAAKLSLSPFPQAPLPKVP*LGKAQEAFKEVAFFNA---------S 61
+SR L C LSA + L P PQ PL + EA K+V F A
Sbjct: 4039 VSRQDTLQQCQAWLSAVQPDLEPSPQPPLSRA-------EAIKQVKHFRALQEQARTYLD 4091

Query: 60 LCCSLYSTSN 31
L CS+ SN
Sbjct: 4092 LLCSMCDLSN 4101


tr_hit_id Q1RN82
Definition tr|Q1RN82|Q1RN82_GOSHI Calmodulin binding heat shock protein OS=Gossypium hirsutum
Align length 70
Score (bit) 39.7
E-value 0.085
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911910|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G03.
(510 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1RN82|Q1RN82_GOSHI Calmodulin binding heat shock protein OS=... 40 0.085
tr|A7QG21|A7QG21_VITVI Chromosome undetermined scaffold_91, whol... 40 0.085
tr|Q1RN86|Q1RN86_GOSHI Calmodulin-binding heat shock protein OS=... 37 0.55
tr|B6KGY3|B6KGY3_TOXGO ATPase, AAA family domain-containing prot... 36 1.2
tr|B8BEN9|B8BEN9_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.1
tr|A7PZF5|A7PZF5_VITVI Chromosome chr15 scaffold_40, whole genom... 35 2.1
tr|A5B0C1|A5B0C1_VITVI Putative uncharacterized protein OS=Vitis... 35 2.1
tr|A3C1P2|A3C1P2_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.1
tr|B0CYH6|B0CYH6_LACBS Predicted protein OS=Laccaria bicolor (st... 34 4.8
tr|Q64YA1|Q64YA1_BACFR AAA-metalloprotease FtsH with ATPase doma... 33 8.0
tr|Q5LHD3|Q5LHD3_BACFN Putative transmembrane AAA-metalloproteas... 33 8.0

>tr|Q1RN82|Q1RN82_GOSHI Calmodulin binding heat shock protein
OS=Gossypium hirsutum PE=2 SV=1
Length = 457

Score = 39.7 bits (91), Expect = 0.085
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAFP---SYGTFGKGA-WGKGESESFAADK 175
++MERQ L E+K++++ AL++A SL+ A+P YGTF + K S +++
Sbjct: 358 QRMERQETLTKEHKQEYKAALQRAVSLSVPHAYPPPSEYGTFDESEDVEKYNSCKLSSES 417

Query: 176 SKQHGGRAKS 205
S G++KS
Sbjct: 418 SVGSSGKSKS 427


>tr|A7QG21|A7QG21_VITVI Chromosome undetermined scaffold_91, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00037669001 PE=4 SV=1
Length = 460

Score = 39.7 bits (91), Expect = 0.085
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAF-PS-YGTFGKGAWGKGESESFAADKSK 181
+KMERQ L+ E+ E+++ AL++A SL A+ PS YGTF G+ S S +
Sbjct: 365 QKMERQETLKREHSEEYKAALQRAVSLAVPHAYSPSQYGTFSDHEEGENSSRS---SEGS 421

Query: 182 QHGGRAKSLDRTTMEEATSSLVQ 250
+G S + + +E L +
Sbjct: 422 SYGSSKTSKKKESWDEVIERLFE 444


>tr|Q1RN86|Q1RN86_GOSHI Calmodulin-binding heat shock protein
OS=Gossypium hirsutum PE=4 SV=1
Length = 457

Score = 37.0 bits (84), Expect = 0.55
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAF--PS-YGTFGKGA-WGKGESESFAADK 175
++MERQ L E+K++++ AL++A SL+ A+ PS YGTF + K S +++
Sbjct: 358 QRMERQETLTKEHKQEYKAALQRAVSLSVPHAYSPPSGYGTFDESEDVEKYNSCKLSSES 417

Query: 176 SKQHGGRAKS 205
S G++KS
Sbjct: 418 SVGSSGKSKS 427


>tr|B6KGY3|B6KGY3_TOXGO ATPase, AAA family domain-containing protein
OS=Toxoplasma gondii ME49 GN=TGME49_047390 PE=4 SV=1
Length = 3668

Score = 35.8 bits (81), Expect = 1.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2

Query: 89 NASCAFPSYGTFGKGAWGKGESESFAADKSKQHGGRAKSLD 211
N C P YG+ G+G+W E + + K+ G +LD
Sbjct: 3407 NGCCGLPRYGSNGRGSWHNAEGHNVGGSREKRQDGALDTLD 3447


>tr|B8BEN9|B8BEN9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_32459 PE=4 SV=1
Length = 1195

Score = 35.0 bits (79), Expect = 2.1
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCA-FPS-YGTFGK 130
++MER L+ E+ E+H+ AL++A +L+ A PS YGTFG+
Sbjct: 1108 QRMERNESLQREHVEEHKAALRRAVTLSVPDARSPSAYGTFGE 1150


>tr|A7PZF5|A7PZF5_VITVI Chromosome chr15 scaffold_40, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00026860001
PE=4 SV=1
Length = 451

Score = 35.0 bits (79), Expect = 2.1
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAF--PSYGTFGKGAWGKGESES 160
++MER + E+ E+++ ALK+A +L+ A+ +YGTF + G+G E+
Sbjct: 358 QRMERLESVAREHTEEYKAALKRAAALDVPQAYSPSAYGTFSEMGEGEGGGEN 410


>tr|A5B0C1|A5B0C1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_005615 PE=4 SV=1
Length = 511

Score = 35.0 bits (79), Expect = 2.1
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAF--PSYGTFGKGAWGKGESES 160
++MER + E+ E+++ ALK+A +L+ A+ +YGTF + G+G E+
Sbjct: 358 QRMERLESVAREHTEEYKAALKRAAALDVPQAYSPSAYGTFSEMGEGEGGGEN 410


>tr|A3C1P2|A3C1P2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_029214 PE=4 SV=1
Length = 1017

Score = 35.0 bits (79), Expect = 2.1
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCA-FPS-YGTFGK 130
++MER L+ E+ E+H+ AL++A +L+ A PS YGTFG+
Sbjct: 930 QRMERNESLQREHVEEHKAALRRAVTLSVPDARSPSAYGTFGE 972


>tr|B0CYH6|B0CYH6_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_311869 PE=4 SV=1
Length = 575

Score = 33.9 bits (76), Expect = 4.8
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -1

Query: 252 LCTKLLVASSIVVLSRDFALPP----CCFDLSAAKLSLSPFPQAPLPKV 118
LC +LL+ IV L+ + LPP C D+ A LSL P P P P +
Sbjct: 84 LCQQLLLRKQIVALTHLWKLPPEYEVICRDIWALHLSLLPNPPPPEPYI 132


>tr|Q64YA1|Q64YA1_BACFR AAA-metalloprotease FtsH with ATPase domain
OS=Bacteroides fragilis GN=BF0774 PE=4 SV=1
Length = 664

Score = 33.1 bits (74), Expect = 8.0
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +2

Query: 8 EKMERQAMLEVEYKEQHREALKKATSLNASCAFPSYGTFGKGAWGKGESESFAADKSKQ- 184
E+ ER + E+KEQH E + A FGK W E AA+ ++
Sbjct: 571 EQYERAKQILSEHKEQHNELAQLLIDKEVIFAEDVERIFGKRPWASRSEEIMAANNKQEN 630

Query: 185 --HGGRAKSLDRTTMEEATS 238
H + +D TT + S
Sbjct: 631 AVHPADGEDVDTTTPQATES 650