BP911911
Clone id YMU001_000010_G04
Library
Length 145
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCCACTGCAAGTGGAGGAGCCTACTGGTGTCCTTACTCGGGCACAAAGAGCAGCTCTTG
GTCTCAGTATGCCCACAGGTCCACCTCGTCAGTCCCCACTTCCTCAATCTGGTCTACCTG
ACCCAAAGGACGAGTCCTTCAAAAT
■■Homology search results ■■ -
sp_hit_id Q8N8S7
Definition sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens
Align length 41
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911911|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G04.
(145 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens GN=... 31 2.2
sp|Q2UY11|COSA1_MOUSE Collagen alpha-1(XXVIII) chain OS=Mus musc... 30 3.7
sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculu... 30 4.8
sp|Q8N143|BCL6B_HUMAN B-cell CLL/lymphoma 6 member B protein OS=... 29 8.2

>sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens
GN=ENAH PE=1 SV=2
Length = 591

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3

Query: 3 PLQVEEPTGVLTRAQRAALGLSMPTGPPRQSPLPQSGLPDP 125
PL P + +A++ L P GPP PLP +G P P
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPP 350


>sp|Q2UY11|COSA1_MOUSE Collagen alpha-1(XXVIII) chain OS=Mus
musculus GN=Col28a1 PE=2 SV=1
Length = 1141

Score = 30.0 bits (66), Expect = 3.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3

Query: 3 PLQVEEPTGVLTRAQRAALGLSMPTGPPRQSPLPQSGLPDPKDE 134
P+ + P G+ + G+ P+GPP P G P PK E
Sbjct: 439 PVGPQGPAGIPGIGSQGEQGIQGPSGPPGPQGPPGQGSPGPKGE 482


>sp|Q8K4J6|MKL1_MOUSE MKL/myocardin-like protein 1 OS=Mus musculus
GN=Mkl1 PE=1 SV=2
Length = 964

Score = 29.6 bits (65), Expect = 4.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3

Query: 3 PLQVEEPTG---VLTRAQRAALGLSMPTGPPRQSPLPQSGLPDP 125
P V + TG +LT ++A G +P G P+Q PL Q G P P
Sbjct: 689 PTLVTDSTGTHLILTVTNKSADGPGLPAGSPQQ-PLSQPGSPAP 731


>sp|Q8N143|BCL6B_HUMAN B-cell CLL/lymphoma 6 member B protein
OS=Homo sapiens GN=BCL6B PE=2 SV=1
Length = 480

Score = 28.9 bits (63), Expect = 8.2
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3

Query: 18 EPTGVLTRAQRAALGLSMPTGPPRQSPLPQSGLPDPKDES 137
EP G+ R A + PT PP SP G PDP ES
Sbjct: 136 EPLGISLRPLEAEPP-TPPTAPPPGSPRRSEGHPDPPTES 174


tr_hit_id B6NM09
Definition tr|B6NM09|B6NM09_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 40
Score (bit) 32.7
E-value 9.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911911|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G04.
(145 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6NM09|B6NM09_BRAFL Putative uncharacterized protein OS=Branc... 33 9.5

>tr|B6NM09|B6NM09_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_60968 PE=4 SV=1
Length = 769

Score = 32.7 bits (73), Expect = 9.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3

Query: 9 QVEEPTGVLTRAQRAALGLSMPTGPPRQSPLPQSGLPDPK 128
Q PT TRA A P PP+ P P +P+PK
Sbjct: 643 QSSAPTSTSTRADSARKETKAPPPPPKAKPPPPKAVPEPK 682