| BP911912 |
| Clone id |
YMU001_000010_G05 |
| Library |
YMU01 |
| Length |
529 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_G05. |
| Accession |
BP911912 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1157Contig1 |
| Sequence |
ACCTGGAAGAATTCGCGGCCAATGTGTTGTGATTGCATTGAATACTTTGGTATTGTCTTT
TACATCCACAAAGCCCAAATGGTGATAGACCATTTGAGTTTCCAGCATGCTCGACACATC
TTTCCCACTTCTGCAAGCTCGAGCAAAATGTGTGTGTATATGCTTCACAGCCCCAGTGAG
ATCTCTCCCTTGGCCAGTTGTAACTACAGCCAGCTCCTTTTTGGGGCTAGCCTTTGGTTC
CACCTCTACGACTACCTCTTTTTCAGGACTGGGTGCAACTACAATAGGCTCTACCATCTT
CCCATTTGGTGTCTCCTCAGGAGCCTCCATAGGTGTTCCTTCAACGGGAACACTTGCTGG
GTTTTCAGCAGCATCCAGTTTTCCATCCAGCACTGCAGGGGGTGCTTTCTCCTCCACAGG
TTTTACCTTTTCTACACTCTTCACAGATCGCACTTCCTCCTCCTCTTTCCCTTCTATATC
CTCTAAATCAGGTATCCCTTCCTCCTTGCGCACACGGTTATTATCAGGT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q14D04 |
| Definition |
sp|Q14D04|MELT_HUMAN Ventricular zone-expressed PH domain-containing protein homolog 1 OS=Homo sapiens |
| Align length |
56 |
| Score (bit) |
33.9 |
| E-value |
0.46 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911912|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G05.
(509 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q14D04|MELT_HUMAN Ventricular zone-expressed PH domain-contai... 34 0.46
sp|Q8NH06|OR1P1_HUMAN Olfactory receptor 1P1 OS=Homo sapiens GN=... 33 0.78
sp|Q5PQS3|MELT_RAT Ventricular zone-expressed PH domain-containi... 33 0.78
sp|A1A535|MELT_MOUSE Ventricular zone-expressed PH domain-contai... 33 0.78
sp|Q9NTG7|SIRT3_HUMAN NAD-dependent deacetylase sirtuin-3, mitoc... 31 2.9
sp|Q5V211|TRPD_HALMA Anthranilate phosphoribosyltransferase OS=H... 31 3.9
sp|Q109B0|MT21A_ORYSJ Class II metallothionein-like protein 1A O... 31 3.9
sp|Q0P4X6|ZBT44_XENTR Zinc finger and BTB domain-containing prot... 30 6.6
sp|Q3SWU4|ZBT44_RAT Zinc finger and BTB domain-containing protei... 30 6.6
sp|Q8R0A2|ZBT44_MOUSE Zinc finger and BTB domain-containing prot... 30 6.6
sp|Q8NCP5|ZBT44_HUMAN Zinc finger and BTB domain-containing prot... 30 6.6
sp|Q9R0R1|TRFM_MOUSE Melanotransferrin OS=Mus musculus GN=Mfi2 P... 30 6.6
sp|Q5PQQ8|ITGBL_RAT Integrin beta-like protein 1 OS=Rattus norve... 30 6.6
sp|Q8C0R9|YG015_MOUSE Leucine-rich repeat and death domain-conta... 30 8.6
>sp|Q14D04|MELT_HUMAN Ventricular zone-expressed PH
domain-containing protein homolog 1 OS=Homo sapiens
GN=VEPH1 PE=1 SV=1
Length = 833
Score = 33.9 bits (76), Expect = 0.46
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -2
Query: 178 TGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNAI 11
TGQ + GAV H+ AR+C + VS + + +HH+ +++K T F++I
Sbjct: 287 TGQMARIYGAVGHVDEERARSCLTYL-VSQLANMEHSFHHILLLEIKSITDTFSSI 341
>sp|Q8NH06|OR1P1_HUMAN Olfactory receptor 1P1 OS=Homo sapiens
GN=OR1P1 PE=2 SV=2
Length = 330
Score = 33.1 bits (74), Expect = 0.78
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +2
Query: 98 IFPTSASSSKMCVYMLHSPSEISPLASCNYSQLLFGASLWFHLYDYLFFRTGCNYNR--- 268
IF TS + K V + IS A C +QL F L F D +F Y+R
Sbjct: 85 IFSTSTTVPKALVNIQTQSRSIS-YAGC-LAQLYF--FLTFGDMD-IFLPATMAYDRYVA 139
Query: 269 LYHLPIWCLLRSLHRCSFNGNTCWVFSSI 355
+ HL + ++ SLHRC+F CW +S+
Sbjct: 140 ICHLLHYMMIMSLHRCAFLVTACWTLTSL 168
>sp|Q5PQS3|MELT_RAT Ventricular zone-expressed PH domain-containing
protein homolog 1 OS=Rattus norvegicus GN=Veph1 PE=2
SV=1
Length = 832
Score = 33.1 bits (74), Expect = 0.78
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 178 TGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNAI 11
TGQ + GAV H+ AR+C VS + + +HH+ +++K T F++I
Sbjct: 287 TGQMARIFGAVGHVDEERARSCLRYL-VSQLANMEHSFHHILLLEIKSLTDAFSSI 341
>sp|A1A535|MELT_MOUSE Ventricular zone-expressed PH
domain-containing protein 1 OS=Mus musculus GN=Veph1
PE=2 SV=1
Length = 833
Score = 33.1 bits (74), Expect = 0.78
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 178 TGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNAI 11
TGQ + GAV H+ AR+C VS + + +HH+ +++K T F++I
Sbjct: 287 TGQMARIFGAVGHVDEERARSCLRYL-VSQLANMEHPFHHILLLEIKSITDAFSSI 341
>sp|Q9NTG7|SIRT3_HUMAN NAD-dependent deacetylase sirtuin-3,
mitochondrial OS=Homo sapiens GN=SIRT3 PE=1 SV=2
Length = 399
Score = 31.2 bits (69), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 155 WGCEAYTHTFCSSLQKWERCVEHAGNSNGLSPFGLCGCK 39
WG A ++L+ W R VE G+ PF CGC+
Sbjct: 4 WGWRA-----AAALRLWGRVVERVEAGGGVGPFQACGCR 37
>sp|Q5V211|TRPD_HALMA Anthranilate phosphoribosyltransferase
OS=Haloarcula marismortui GN=trpD PE=3 SV=1
Length = 331
Score = 30.8 bits (68), Expect = 3.9
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 301 EPP*V--FLQREHLLGFQQHPVFHPALQGVLSPPQVL 405
EPP V ++R+ + GF PVFHPA++ V+ P Q L
Sbjct: 132 EPPDVEETIERDGI-GFMLAPVFHPAMKAVIGPRQEL 167
>sp|Q109B0|MT21A_ORYSJ Class II metallothionein-like protein 1A
OS=Oryza sativa subsp. japonica GN=MT21A PE=2 SV=1
Length = 87
Score = 30.8 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -1
Query: 425 CEECRKGKTCGGESTPCSAGWKTGCC*KPSKCSR*RNTYGGS*GDTKWEDGRAYCSC 255
C ++ GG+ T CS G GC P +C R G E+ RA CSC
Sbjct: 19 CRCASSARSGGGDHTTCSCGDHCGC--NPCRCGRESQPTGR-------ENRRAGCSC 66
>sp|Q0P4X6|ZBT44_XENTR Zinc finger and BTB domain-containing protein
44 OS=Xenopus tropicalis GN=zbtb44 PE=2 SV=1
Length = 448
Score = 30.0 bits (66), Expect = 6.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 52 SPNG-DRPFEFPACSTHLSHFCKLEQNVCVYA 144
SPNG DRPF+ P C + L+Q++ +++
Sbjct: 386 SPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHS 417
>sp|Q3SWU4|ZBT44_RAT Zinc finger and BTB domain-containing protein
44 OS=Rattus norvegicus GN=Zbtb44 PE=2 SV=1
Length = 453
Score = 30.0 bits (66), Expect = 6.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 52 SPNG-DRPFEFPACSTHLSHFCKLEQNVCVYA 144
SPNG DRPF+ P C + L+Q++ +++
Sbjct: 391 SPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHS 422
>sp|Q8R0A2|ZBT44_MOUSE Zinc finger and BTB domain-containing protein
44 OS=Mus musculus GN=Zbtb44 PE=1 SV=2
Length = 453
Score = 30.0 bits (66), Expect = 6.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 52 SPNG-DRPFEFPACSTHLSHFCKLEQNVCVYA 144
SPNG DRPF+ P C + L+Q++ +++
Sbjct: 391 SPNGPDRPFQCPTCGVRFTRIQNLKQHMLIHS 422
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7P8E4 |
| Definition |
tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
61 |
| Score (bit) |
53.5 |
| E-value |
6.0e-06 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911912|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G05.
(509 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome ... 54 6e-06
tr|Q8BGH1|Q8BGH1_MOUSE Putative uncharacterized protein OS=Mus m... 52 2e-05
tr|Q7X997|Q7X997_ORYSJ Os09g0542500 protein OS=Oryza sativa subs... 41 0.029
tr|A3C141|A3C141_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.029
tr|A2Z3M3|A2Z3M3_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.029
tr|A9S1M6|A9S1M6_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.038
tr|A9S7Q5|A9S7Q5_PHYPA Predicted protein (Fragment) OS=Physcomit... 40 0.085
tr|A9S735|A9S735_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.19
tr|A9RKX2|A9RKX2_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.55
tr|A7R729|A7R729_VITVI Chromosome undetermined scaffold_1540, wh... 37 0.55
tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, who... 37 0.55
tr|B6N4K6|B6N4K6_BRAFL Putative uncharacterized protein OS=Branc... 35 1.6
tr|B4PDS6|B4PDS6_DROYA GE20925 OS=Drosophila yakuba GN=GE20925 P... 35 2.7
tr|Q9SD19|Q9SD19_ARATH Putative uncharacterized protein F24M12.3... 34 3.6
tr|Q5XV54|Q5XV54_ARATH Putative uncharacterized protein OS=Arabi... 34 3.6
tr|A7P7D2|A7P7D2_VITVI Chromosome chr9 scaffold_7, whole genome ... 34 3.6
tr|A5B8V5|A5B8V5_VITVI Putative uncharacterized protein OS=Vitis... 34 3.6
tr|O65666|O65666_ARATH Putative uncharacterized protein AT4g3979... 34 4.7
tr|A9PCM6|A9PCM6_POPTR Putative uncharacterized protein OS=Popul... 34 4.7
tr|B6MXV1|B6MXV1_BRAFL Putative uncharacterized protein OS=Branc... 34 4.7
tr|Q6IGN5|Q6IGN5_DROME HDC05837 OS=Drosophila melanogaster GN=HD... 33 6.1
tr|Q1MP00|Q1MP00_LAWIP Putative uncharacterized protein LIB005 O... 33 8.0
tr|B8LQT1|B8LQT1_PICSI Putative uncharacterized protein OS=Picea... 33 8.0
tr|B3NET9|B3NET9_DROER GG14570 OS=Drosophila erecta GN=GG14570 P... 33 8.0
tr|Q6C2J5|Q6C2J5_YARLI YALI0F07359p OS=Yarrowia lipolytica GN=YA... 33 8.0
>tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036148001
PE=4 SV=1
Length = 583
Score = 53.5 bits (127), Expect = 6e-06
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 TTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDN-TKVFNAITT 5
T +GR+L A+K I HF RA SGKDVS MLE V+ G ++K N TK+ AIT
Sbjct: 106 TPARGRELLDALKDIEDHFIRAYDSGKDVSRMLEASRVHMLSGLEEIKGNSTKLIQAITW 165
Query: 4 H 2
H
Sbjct: 166 H 166
>tr|Q8BGH1|Q8BGH1_MOUSE Putative uncharacterized protein OS=Mus
musculus PE=2 SV=1
Length = 642
Score = 52.0 bits (123), Expect = 2e-05
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -2
Query: 184 VTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDN 32
+ GR+L A+K + HF RAC SG +VS MLE + + H F D+KDN
Sbjct: 172 MVNNNGRELLEALKDVEDHFLRACESGMEVSKMLEVEKIPSHPTFEDIKDN 222
>tr|Q7X997|Q7X997_ORYSJ Os09g0542500 protein OS=Oryza sativa subsp.
japonica GN=P0478E02.15 PE=4 SV=1
Length = 722
Score = 41.2 bits (95), Expect = 0.029
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -2
Query: 193 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 14
L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A
Sbjct: 241 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPEL----KENSSKIIHA 296
Query: 13 ITTH 2
IT H
Sbjct: 297 ITWH 300
>tr|A3C141|A3C141_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_029013 PE=4 SV=1
Length = 806
Score = 41.2 bits (95), Expect = 0.029
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -2
Query: 193 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 14
L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A
Sbjct: 250 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPEL----KENSSKIIHA 305
Query: 13 ITTH 2
IT H
Sbjct: 306 ITWH 309
>tr|A2Z3M3|A2Z3M3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_32233 PE=4 SV=1
Length = 618
Score = 41.2 bits (95), Expect = 0.029
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -2
Query: 193 LAVVTTGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVKDNTKVFNA 14
L V + GR+L A+K I FARA +GK+V++MLE L ++++K+ +A
Sbjct: 137 LEVAVSQPGRELLAALKEIEELFARAAEAGKEVTAMLEAASRVPEL----KENSSKIIHA 192
Query: 13 ITTH 2
IT H
Sbjct: 193 ITWH 196
>tr|A9S1M6|A9S1M6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_122628 PE=4 SV=1
Length = 594
Score = 40.8 bits (94), Expect = 0.038
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 193 LAVVTTGQG-RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVD 44
LAV+ G RDL +K + HF +A G+D+S +LET+ + H F D
Sbjct: 191 LAVIKMESGDRDLLDVLKEVDDHFLQAAERGEDISRILETKKTHFHTSFSD 241
>tr|A9S7Q5|A9S7Q5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_11802 PE=4 SV=1
Length = 597
Score = 39.7 bits (91), Expect = 0.085
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -2
Query: 193 LAVVTTGQG-RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVD 44
LAVV +G RDL +K + F RA SG++VS +LET+ ++H F D
Sbjct: 211 LAVVKAEKGGRDLLDVLKEVDECFLRAADSGENVSRILETKKAHYHSSFSD 261
>tr|A9S735|A9S735_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_125175 PE=4 SV=1
Length = 685
Score = 38.5 bits (88), Expect = 0.19
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = -2
Query: 166 RDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVD 44
RDL +K + +F +A SG++V+ MLET+ ++H F D
Sbjct: 261 RDLLDVLKEVDDYFLKAAESGENVARMLETKKAHYHSSFSD 301
>tr|A9RKX2|A9RKX2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_115979 PE=4 SV=1
Length = 608
Score = 37.0 bits (84), Expect = 0.55
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -2
Query: 169 GRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVD 44
GRDL +K + F +A SG+ VS++L+T+ ++H F D
Sbjct: 212 GRDLLEVLKEVDECFVKAAESGEIVSTLLDTKKAHYHSNFSD 253
>tr|A7R729|A7R729_VITVI Chromosome undetermined scaffold_1540, whole
genome shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00008538001 PE=4 SV=1
Length = 286
Score = 37.0 bits (84), Expect = 0.55
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 178 TGQGRDLTGAVKHIHTHFARACRSGKDVSSMLETQMVYHHLGFVDVK 38
T + +D ++K I F RA SGK+VS MLET + +G+ D K
Sbjct: 238 THRAKDFLSSIKDIEHRFFRASESGKEVSRMLETNKI--GMGYCDAK 282
|