BP911914
Clone id YMU001_000010_A04
Library
Length 461
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACATGCTACACGGCCAACAAAGGCATGAGTGTTATTGATTATGTATTGATTGCATATGAG
GCATCCCATATTGTAAGTAATTTCATAATTGGGAAGAGGTCACCCAATTCGGACCACACC
CCAATCCATGTATGGCTACAAGTTCCCACTCAAAAAGCACAAAGAACAGCCCCATGCCCG
ATCATGGACATACAAAATGCAAGTGGACAAGAAAAGAATGTATGCAGAACATCTAGACAA
TGCACTTGCTCATATACCCATGCCATCACACATTGAACAAGCATGGCCAATTTTCAAACA
AGCTCTATGTGACGCCGTGGAACAAACAATGGGAAAAACGCATCGGCGGGGAAATCATGT
TAAAGGGCTACCGCATAACCCATGGTTTGATGAAGAGTGTAAGTATGTAAAAAAACAATT
GTGGGCACTGTCAACGACGAACACAGAATGGGAAACTCTAT
■■Homology search results ■■ -
sp_hit_id P04933
Definition sp|P04933|MSP1_PLAFW Merozoite surface protein 1 OS=Plasmodium falciparum (isolate Wellcome)
Align length 64
Score (bit) 35.0
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911914|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A04.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P04933|MSP1_PLAFW Merozoite surface protein 1 OS=Plasmodium f... 35 0.16
sp|P04932|MSP1_PLAFK Merozoite surface protein 1 OS=Plasmodium f... 35 0.16
sp|Q979Y4|SYN_THEVO Asparaginyl-tRNA synthetase OS=Thermoplasma ... 31 2.2
sp|Q9HKS7|SYN_THEAC Asparaginyl-tRNA synthetase OS=Thermoplasma ... 31 2.9
sp|Q03GY4|LGT_PEDPA Prolipoprotein diacylglyceryl transferase OS... 30 6.5
sp|Q5PNS0|Y3228_ARATH PHD finger protein At3g20280 OS=Arabidopsi... 29 8.5
sp|P20113|NU4M_CHLRE NADH-ubiquinone oxidoreductase chain 4 OS=C... 29 8.5

>sp|P04933|MSP1_PLAFW Merozoite surface protein 1 OS=Plasmodium
falciparum (isolate Wellcome) GN=MSP-1 PE=1 SV=2
Length = 1639

Score = 35.0 bits (79), Expect = 0.16
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1028 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 1087

Query: 359 VKGL 370
KGL
Sbjct: 1088 YKGL 1091


>sp|P04932|MSP1_PLAFK Merozoite surface protein 1 OS=Plasmodium
falciparum (isolate K1 / Thailand) GN=MSP-1 PE=3 SV=2
Length = 1630

Score = 35.0 bits (79), Expect = 0.16
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1019 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 1078

Query: 359 VKGL 370
KGL
Sbjct: 1079 YKGL 1082


>sp|Q979Y4|SYN_THEVO Asparaginyl-tRNA synthetase OS=Thermoplasma
volcanium GN=asnS PE=3 SV=1
Length = 429

Score = 31.2 bits (69), Expect = 2.2
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2

Query: 122 QSMYGYKFPLKKHKEQPHARSWTYKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWP 289
+S Y + L+K+ PH+ + + +D+ M+ HLDN IP P I + P
Sbjct: 377 ESAYYWYIDLRKYGSVPHSG---FGLGMDRLAMWIMHLDNIREAIPYPRTIRRTKP 429


>sp|Q9HKS7|SYN_THEAC Asparaginyl-tRNA synthetase OS=Thermoplasma
acidophilum GN=asnS PE=3 SV=1
Length = 429

Score = 30.8 bits (68), Expect = 2.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2

Query: 122 QSMYGYKFPLKKHKEQPHARSWTYKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWP 289
+S Y + L+K+ PH+ + + +D+ M+ HLDN IP P I + P
Sbjct: 377 ESAYYWYVDLRKYGSVPHSG---FGLGLDRLAMWIMHLDNIREAIPYPRTIRRTKP 429


>sp|Q03GY4|LGT_PEDPA Prolipoprotein diacylglyceryl transferase
OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
GN=lgt PE=3 SV=1
Length = 278

Score = 29.6 bits (65), Expect = 6.5
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = -1

Query: 287 AMLVQCVMAWVYEQVHCLDVLHTFFSCPLAFCMSMIGHGAVLCAF*VGTCSHTWIGVWSE 108
A + + W Y Q H +D + + +A ++IG G V+ F C WI VW
Sbjct: 67 ARMYYVIFEWGYYQNH-VDEIVRVWDGGIAIYGALIGAGIVVYLF----CRANWIPVWLM 121

Query: 107 LGDLFPIM 84
L + P++
Sbjct: 122 LDIIAPVL 129


>sp|Q5PNS0|Y3228_ARATH PHD finger protein At3g20280 OS=Arabidopsis
thaliana GN=At3g20280 PE=2 SV=1
Length = 482

Score = 29.3 bits (64), Expect = 8.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2

Query: 305 LCDAVEQTMGKTHRRGNHVKGLPHNPWFDEEC 400
+CDA E+ +GN++KG+P + W C
Sbjct: 63 ICDACEKAYHLKCLQGNNMKGVPKSEWHCSRC 94


>sp|P20113|NU4M_CHLRE NADH-ubiquinone oxidoreductase chain 4
OS=Chlamydomonas reinhardtii GN=ND4 PE=3 SV=1
Length = 443

Score = 29.3 bits (64), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2

Query: 244 CIV*MFCIHSFLVHLHFVCP*SGMGLFFVLFEWELVAIHGLGCGPNWVTSSQ 89
C+V +F +H L ++ VC G F F +HGL GP VT ++
Sbjct: 375 CMVSIFAVHELLAYVFCVCQVLGAAYGFWAFN---RVVHGLPRGPADVTRTE 423


tr_hit_id B6PPA3
Definition tr|B6PPA3|B6PPA3_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 83
Score (bit) 43.9
E-value 0.004
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911914|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_A04.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6PPA3|B6PPA3_BRAFL Putative uncharacterized protein OS=Branc... 44 0.004
tr|B6LAN9|B6LAN9_BRAFL Putative uncharacterized protein OS=Branc... 44 0.004
tr|Q9NAT3|Q9NAT3_PLAFA Merozoite surface protein 1 (Fragment) OS... 35 1.9
tr|Q6LBT0|Q6LBT0_PLAFA Gp195 surface antigen preprotein (Merozoi... 35 1.9
tr|A5A7C4|A5A7C4_PLAFA Merozoite surface protein-1 OS=Plasmodium... 35 1.9
tr|A5A7B1|A5A7B1_PLAFA Merozoite surface protein-1 OS=Plasmodium... 35 1.9
tr|A5A7A8|A5A7A8_PLAFA Merozoite surface protein-1 OS=Plasmodium... 35 1.9
tr|Q6AV71|Q6AV71_ORYSJ Transposase family protein (Transposon pr... 33 5.4
tr|Q2QV34|Q2QV34_ORYSJ Transposon protein, putative, CACTA, En/S... 33 5.4
tr|Q4UF28|Q4UF28_THEAN Putative uncharacterized protein OS=Theil... 33 7.0
tr|Q5NL42|Q5NL42_ZYMMO Transcriptional regulatory protein OS=Zym... 33 9.2
tr|B0G2F1|B0G2F1_9FIRM Putative uncharacterized protein OS=Dorea... 33 9.2
tr|A9UZV8|A9UZV8_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.2

>tr|B6PPA3|B6PPA3_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_109345 PE=4 SV=1
Length = 415

Score = 43.9 bits (102), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2

Query: 203 VDKKRMYAEHLDNALAHIPMPSHIEQAWPIFKQALCDAVEQTMGKTHRRGNHVKGLPHNP 382
V+ K + A +L + +P S+ E+AW F++ + D E+T+G T R+ H
Sbjct: 263 VETKEVLARNLREQIKKLPAESNPEKAWGNFRKVMYDTSERTLGHTKRK--------HQD 314

Query: 383 WFDEECKYVKKQLWALSTTNTEW 451
WFD + + L T+W
Sbjct: 315 WFDNNNEEITSLLKKKQEAFTQW 337


>tr|B6LAN9|B6LAN9_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_68228 PE=4 SV=1
Length = 605

Score = 43.9 bits (102), Expect = 0.004
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2

Query: 203 VDKKRMYAEHLDNALAHIPMPSHIEQAWPIFKQALCDAVEQTMGKTHRRGNHVKGLPHNP 382
V+ K + A +L + +P S+ E+AW F++ + D E+T+G T R+ H
Sbjct: 363 VETKEVLARNLREQIKKLPAESNPEKAWGNFRKVMYDTSERTLGHTKRK--------HQD 414

Query: 383 WFDEECKYVKKQLWALSTTNTEW 451
WFD + + L T+W
Sbjct: 415 WFDNNNEEITSLLKKKQEAFTQW 437


>tr|Q9NAT3|Q9NAT3_PLAFA Merozoite surface protein 1 (Fragment)
OS=Plasmodium falciparum GN=msp-1 PE=2 SV=1
Length = 360

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 127 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 186

Query: 359 VKGL 370
KGL
Sbjct: 187 YKGL 190


>tr|Q6LBT0|Q6LBT0_PLAFA Gp195 surface antigen preprotein (Merozoite
surface protein-1) OS=Plasmodium falciparum GN=msp1 PE=2
SV=1
Length = 1639

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1028 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 1087

Query: 359 VKGL 370
KGL
Sbjct: 1088 YKGL 1091


>tr|A5A7C4|A5A7C4_PLAFA Merozoite surface protein-1 OS=Plasmodium
falciparum GN=msp1 PE=4 SV=1
Length = 1627

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1016 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 1075

Query: 359 VKGL 370
KGL
Sbjct: 1076 YKGL 1079


>tr|A5A7B1|A5A7B1_PLAFA Merozoite surface protein-1 OS=Plasmodium
falciparum GN=msp1 PE=4 SV=1
Length = 1633

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1022 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFNKKKEAEIAETENTLENTKILLKH 1081

Query: 359 VKGL 370
KGL
Sbjct: 1082 YKGL 1085


>tr|A5A7A8|A5A7A8_PLAFA Merozoite surface protein-1 OS=Plasmodium
falciparum GN=msp1 PE=4 SV=1
Length = 1627

Score = 35.0 bits (79), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2

Query: 191 YKMQVDKKRMYAEHLDNALAHIPMPSHIEQAWPIF----KQALCDAVEQTMGKTHRRGNH 358
YKMQ+ K + E L++ L + P H+ Q + +F K+A E T+ T H
Sbjct: 1016 YKMQIKKLTLLKEQLESKLNSLNNPKHVLQNFSVFFYKKKEAEIAETENTLENTKILLKH 1075

Query: 359 VKGL 370
KGL
Sbjct: 1076 YKGL 1079


>tr|Q6AV71|Q6AV71_ORYSJ Transposase family protein (Transposon
protein, putative, CACTA, En/Spm sub-class, expressed)
OS=Oryza sativa subsp. japonica GN=OSJNBa0035N15.8 PE=4
SV=1
Length = 819

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2

Query: 209 KKRMYAEHLDNALAHIPMPSHIEQAWPIFKQALCDAVEQTMGKTHRRGNHVKGLPHNPWF 388
+KR+ A+ A AH + H+ + P F++ L + +G++ N G N WF
Sbjct: 678 RKRIVADQASYAQAHFAVLQHMAEVTPYFEEHLAKVRQDNIGRSDIWINKEHGARFNEWF 737

Query: 389 DE 394
+
Sbjct: 738 KD 739


>tr|Q2QV34|Q2QV34_ORYSJ Transposon protein, putative, CACTA, En/Spm
sub-class OS=Oryza sativa subsp. japonica
GN=LOC_Os12g14180 PE=4 SV=1
Length = 945

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2

Query: 206 DKKRMYAEHLDNALAHIPMPSHIEQAWPIFKQALCDAVEQTMGKTHRRGNHVKGLPHNPW 385
D+KR+ + A AH + H+ + P F++ L + +G + N G N W
Sbjct: 688 DRKRIVPDQASYAQAHFAVLQHMAEVTPYFEEHLAKVRQDNIGPSDILINREHGARFNEW 747

Query: 386 FDE 394
F +
Sbjct: 748 FKD 750


>tr|Q4UF28|Q4UF28_THEAN Putative uncharacterized protein
OS=Theileria annulata GN=TA14485 PE=4 SV=1
Length = 521

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3

Query: 123 NPCMATSSHSKSTKNSPMPDHGHTKCKWTRKECMQNI*TMHLLIYPCHHTLN 278
NPC + S +N P + G TK KW K ++ + ++ +++ + +LN
Sbjct: 296 NPCSVIVTEESSKENLPTEETGETKPKWNFKGFLKALNSVEVIVCTLYFSLN 347