BP911921
Clone id YMU001_000010_G06
Library
Length 392
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGCTGAAGGCGGGTGTTATAACTATTGGGGTGGCCTAGGGTCTCATGAGAGGGGGCAAAA
AGAAGCGATGGGTGCAACAGTGCAGCTACATGCAAGGAGGAGGCGTACATGGAGAAGATG
CAGGACATTGTGGCTGCCTTTCTATCAATGCATGATTGAGGTTGTCCAAGCACATTCTGT
GTAGTAGGTGCGTGCCCTTTCAACAACGTCCTGCAGATGTTCTGATGCAAACGACATTGA
GGGTCCATGATAGAGCGTTATTTGCTCAAGTGCTTGCATATGACGCTGTAGAGTGCGAAT
TTTGCGATTTTGCAATTGCTTCCAAAGTTTCAAATTTGGCAGGAATGGAACTAACGCATG
TGCTAGCCACAATGATAGGTCCCCCTTCCACT
■■Homology search results ■■ -
sp_hit_id Q6P402
Definition sp|Q6P402|CC123_DANRE Coiled-coil domain-containing protein 123, mitochondrial OS=Danio rerio
Align length 42
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911921|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G06.
(392 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6P402|CC123_DANRE Coiled-coil domain-containing protein 123,... 32 1.3
sp|Q80Y86|MK15_MOUSE Mitogen-activated protein kinase 15 OS=Mus ... 30 3.8
sp|Q9Z2A6|MK15_RAT Mitogen-activated protein kinase 15 OS=Rattus... 30 4.9
sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium disc... 29 8.4

>sp|Q6P402|CC123_DANRE Coiled-coil domain-containing protein 123,
mitochondrial OS=Danio rerio GN=ccdc123 PE=2 SV=1
Length = 695

Score = 31.6 bits (70), Expect = 1.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3

Query: 330 KLWKQLQNRKIRTLQRHMQALEQITLYHGPSMSFASEHLQDV 205
K W+QLQ + L+ + +EQ+ L H + S+H Q+V
Sbjct: 455 KEWRQLQEQARLVLEENQVLIEQLELQHAKAKEAHSKHAQEV 496


>sp|Q80Y86|MK15_MOUSE Mitogen-activated protein kinase 15 OS=Mus
musculus GN=Mapk15 PE=1 SV=1
Length = 549

Score = 30.0 bits (66), Expect = 3.8
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3

Query: 156 LRLSKHILCSRCVPFQQRPADVLMQTTLRVHDRALFAQVLAYDAVECEFCDFAIASKVSN 335
LR +K I R + Q+PA+VL+ + RV + CDF +A + +
Sbjct: 123 LRATKFIHSGRVIHRDQKPANVLLDSACRV-----------------KLCDFGLARSLGD 165

Query: 336 L----AGMELTHVLAT 371
L G LT +AT
Sbjct: 166 LPEGPGGQALTEYVAT 181


>sp|Q9Z2A6|MK15_RAT Mitogen-activated protein kinase 15 OS=Rattus
norvegicus GN=Mapk15 PE=1 SV=2
Length = 547

Score = 29.6 bits (65), Expect = 4.9
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +3

Query: 156 LRLSKHILCSRCVPFQQRPADVLMQTTLRVHDRALFAQVLAYDAVECEFCDFAIASKVSN 335
LR +K I R + Q+PA+VL+ RV + CDF +A +S+
Sbjct: 123 LRATKFIHSGRVIHRDQKPANVLLDAACRV-----------------KLCDFGLARSLSD 165

Query: 336 L----AGMELTHVLAT 371
G LT +AT
Sbjct: 166 FPEGPGGQALTEYVAT 181


>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium
discoideum GN=rngB PE=2 SV=2
Length = 943

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -3

Query: 345 FLPNLKLWKQLQNRKIRTLQRHMQALEQITLYHGPSMSFASEHLQDVVER 196
F NLK ++L N+KI+ Q++ Q+LE+ +S + +Q ++++
Sbjct: 584 FQTNLKRVEELFNQKIKHEQKYRQSLEEKLGKANHQVSLLTNQIQSIIQK 633


tr_hit_id Q6FYL5
Definition tr|Q6FYL5|Q6FYL5_BARQU Putative uncharacterized protein OS=Bartonella quintana
Align length 58
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911921|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_G06.
(392 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6FYL5|Q6FYL5_BARQU Putative uncharacterized protein OS=Barto... 34 3.2
tr|B6M7R6|B6M7R6_BRAFL Putative uncharacterized protein (Fragmen... 34 4.2
tr|Q5LW54|Q5LW54_SILPO ISSpo2, transposase OS=Silicibacter pomer... 33 5.4
tr|Q6FMU4|Q6FMU4_CANGA Strain CBS138 chromosome K complete seque... 33 9.3

>tr|Q6FYL5|Q6FYL5_BARQU Putative uncharacterized protein
OS=Bartonella quintana GN=BQ12320 PE=4 SV=1
Length = 229

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/58 (25%), Positives = 34/58 (58%)
Frame = -3

Query: 348 PFLPNLKLWKQLQNRKIRTLQRHMQALEQITLYHGPSMSFASEHLQDVVERARTYYTE 175
P++P+++ WK LQ I T Q + LE++ L S + +++H+ +++ ++ + E
Sbjct: 7 PYIPSVEAWKNLQKDIIETCQNMNRPLEEVQLI-AVSKTVSADHIFPLLQAGQSVFAE 63


>tr|B6M7R6|B6M7R6_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_79198 PE=4 SV=1
Length = 499

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -3

Query: 285 RHMQA-LEQITLYHGPSMSFASEHLQDVVERARTYYTECAWTTS 157
RH++A L Q+ +HG +S++S ++++VER R + C W S
Sbjct: 267 RHVEARLVQVGTFHGKYVSWSSVDVKNIVERVRLPNSACKWGRS 310


>tr|Q5LW54|Q5LW54_SILPO ISSpo2, transposase OS=Silicibacter pomeroyi
GN=SPO0489 PE=4 SV=1
Length = 449

Score = 33.5 bits (75), Expect = 5.4
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Frame = +3

Query: 123 GHCGCLSINA*LRLSK--HILCSRCVPFQQRPAD----VLMQTTLRVHDR---------A 257
GH GC+ + ++ H+ C P AD VL R DR A
Sbjct: 177 GHFGCICYHPLFVFNQFGHLECCALRPGNVHSADGWEEVLKPVIARYADRHLMRFFWADA 236

Query: 258 LFAQVLAYDAVECEFCDFAIASKVSNLAGMELTHVLATMIGPP 386
FA Y+A+E E C +AI + + + + H+L +G P
Sbjct: 237 AFAIPGLYEALEAENCFYAIRMRANRILQGRIAHLLKRPVGRP 279


>tr|Q6FMU4|Q6FMU4_CANGA Strain CBS138 chromosome K complete sequence
OS=Candida glabrata GN=CAGL0K05137g PE=4 SV=1
Length = 1212

Score = 32.7 bits (73), Expect = 9.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3

Query: 381 DLSLWLAHALVPFLPNLKLWKQLQNRKIRTLQRHMQALEQITLYHGP 241
D +W+A AL+PF PN+ + + N + T H QA+E Y+ P
Sbjct: 547 DADVWMAPALLPFFPNIAM--NMNNYRNAT---HQQAIENAKQYNYP 588