BP911928 |
Clone id |
YMU001_000010_H03 |
Library |
YMU01 |
Length |
436 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000010_H03. |
Accession |
BP911928 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATGTAGTCTTCAATAGGTCTACCTTTAGGGGGACTCAGCCTTGGGTAGTTGAGCCATAT AGGAAGTTTCTTTAAAATCAACTGATGAGGCTGTCCCAGCTTTGCACTCTTGGCACTAGG CAAAATGTTGGGTGCTTTCTCATATCCGATAGTGCTTGTGTGTAGAGGATGAGGTACTTA GGATGTTTCTTTATCCAATGCATCCTCCAAGCTGGGTGTTGATCGGCATTGTTCGCAGCT TGATCCTTGTTAAGTCTCTCCTTTACTTTGAGGATTTCATACTTGATGAGTAGATATGGG AGAGACTGATGATGCCATGTATTTGTGATCTGCTTAGAAGTGAGCTACACTACATTGGTA GAGTGGAGAATTTGTTGCTCCCACACTATGGCCTCTTTCCATATGTCTTCTATTCCTGAC TCTATATTGACTTTAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5KCF5 |
Definition |
sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans |
Align length |
27 |
Score (bit) |
31.6 |
E-value |
1.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911928|Adiantum capillus-veneris mRNA, clone: YMU001_000010_H03. (436 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45 OS=Cryptoco... 32 1.5 sp|Q8IUG5|MY18B_HUMAN Myosin-XVIIIb OS=Homo sapiens GN=MYO18B PE... 31 2.6 sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family prote... 30 3.3 sp|Q99JE6|PLCB3_RAT 1-phosphatidylinositol-4,5-bisphosphate phos... 30 4.4 sp|Q5F3L3|K1467_CHICK Uncharacterized protein KIAA1467 homolog O... 30 5.6 sp|Q8NGF9|OR4X2_HUMAN Olfactory receptor 4X2 OS=Homo sapiens GN=... 30 5.7 sp|Q01751|REGA_BPR69 Translation repressor protein OS=Enterobact... 29 7.3 sp|A5DI74|U507_PICGU UPF0507 protein PGUG_02975 OS=Pichia guilli... 29 9.8 sp|P78415|IRX3_HUMAN Iroquois-class homeodomain protein IRX-3 OS... 29 9.8 sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus G... 29 9.8
>sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans GN=PRP45 PE=3 SV=1 Length = 594
Score = 31.6 bits (70), Expect = 1.5 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2
Query: 177 VPHPLHTSTIGYEKAPNILPSAKSAKL 97 +P PLHTST YE+AP LP+ +L Sbjct: 28 LPAPLHTSTTEYEEAPAPLPTTPGPQL 54
>sp|Q8IUG5|MY18B_HUMAN Myosin-XVIIIb OS=Homo sapiens GN=MYO18B PE=1 SV=1 Length = 2567
Score = 30.8 bits (68), Expect = 2.6 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = -2
Query: 276 NPQSKGET*QGS---SCEQCRSTPSLEDALDKET--S*VPHPLHTSTIGYEKAPNILPSA 112 N +S T GS S + S+P D L KE+ S P P ++I EKA + SA Sbjct: 76 NSKSSSGTRSGSQQISQDDQSSSPGSSDILGKESEGSRSPDPEQMTSINGEKAQELGSSA 135
Query: 111 KSAKLGQPHQLILKKLPIWLNYPRLSPPKGRP 16 K P + +++ + L +L P +P Sbjct: 136 TPTKKTVPFKRGVRRGDVLLMVAKLDPDSAKP 167
>sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein C1F5.11c OS=Schizosaccharomyces pombe GN=SPAC1F5.11c PE=2 SV=1 Length = 3655
Score = 30.4 bits (67), Expect = 3.3 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = -3
Query: 407 DIWKEAIVWEQQILHSTNVV*L----TSKQITNTWHHQSLPYLLIKYEIL 270 DIW + I W Q + S N V L ++Q TN + S+ YL Y L Sbjct: 2762 DIWSDLIAWRQSVFKSINKVFLPLVSIAQQSTNKSNTNSVSYLYRGYHEL 2811
>sp|Q99JE6|PLCB3_RAT 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus GN=Plcb3 PE=1 SV=2 Length = 1234
Score = 30.0 bits (66), Expect = 4.4 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Frame = -2
Query: 330 DHK-YMASSVSPISTHQV*NPQSK------GET*QGSSCEQCRSTPSLEDALDKETS*VP 172 DH+ Y + ++PI + + ++K GE+ +S E C+ TPS + ++ VP Sbjct: 850 DHQDYAEALINPIKHVSLMDQRAKQLAALIGESEAQASTEMCQETPSQQQGSQLSSNPVP 909
Query: 171 HPLHTSTIGYEKAPNILPSAKSAKLGQPHQ 82 +PL S P S S L P Q Sbjct: 910 NPLDDSP---RWPPGPTTSPTSTSLSSPGQ 936
>sp|Q5F3L3|K1467_CHICK Uncharacterized protein KIAA1467 homolog OS=Gallus gallus GN=RCJMB04_14d19 PE=2 SV=1 Length = 623
Score = 29.6 bits (65), Expect = 5.6 Identities = 14/47 (29%), Positives = 28/47 (59%) Frame = -3
Query: 431 VNIESGIEDIWKEAIVWEQQILHSTNVV*LTSKQITNTWHHQSLPYL 291 V+ +SG+ +WK+ + W++Q L + +V+ L K + W ++ P L Sbjct: 459 VDGKSGLP-VWKQELPWQKQQLDALSVMTLDKKSVFLFWADEAQPVL 504
>sp|Q8NGF9|OR4X2_HUMAN Olfactory receptor 4X2 OS=Homo sapiens GN=OR4X2 PE=2 SV=1 Length = 303
Score = 29.6 bits (65), Expect = 5.7 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +1
Query: 316 HVFVICLEVSYTTLVEWRIC 375 H IC +SYTT++ W++C Sbjct: 114 HYVAICKPLSYTTIMNWQVC 133
>sp|Q01751|REGA_BPR69 Translation repressor protein OS=Enterobacteria phage RB69 GN=regA PE=1 SV=1 Length = 122
Score = 29.3 bits (64), Expect = 7.3 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3
Query: 278 EILKVKERLNKDQAANNADQHPAWRMHWIKKHPKYLILYTQALSDM 141 + LKVKE L + ANN D+ H ++K KY I++ + + M Sbjct: 11 DFLKVKETLTRMGIANNKDKVLYQSCHILQKQGKYYIVHFKEMLRM 56
>sp|A5DI74|U507_PICGU UPF0507 protein PGUG_02975 OS=Pichia guilliermondii GN=PGUG_02975 PE=3 SV=2 Length = 1133
Score = 28.9 bits (63), Expect = 9.8 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2
Query: 129 NILPSAKSAKLGQPHQLILKKLPIWLNYP 43 +I S S KL PH LI +WLNYP Sbjct: 817 SIKQSHHSFKLKNPHSLIPDVEKVWLNYP 845
>sp|P78415|IRX3_HUMAN Iroquois-class homeodomain protein IRX-3 OS=Homo sapiens GN=IRX3 PE=2 SV=3 Length = 501
Score = 28.9 bits (63), Expect = 9.8 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = -2
Query: 147 GYEKAPNILPSAKSAKLGQPHQLI---LKKLPIWLNYPRLSPPKG 22 G AP+ L + +A H+L+ L K P W N P PP G Sbjct: 375 GAAVAPSALQLSPAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPPG 419
>sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus GN=Fosl1 PE=2 SV=1 Length = 275
Score = 28.9 bits (63), Expect = 9.8 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = -2
Query: 174 PHPLHTSTIGYEK---APNILPSAKSAKLG---QPHQLILKKLPIWLNYPRLSPPKGRP 16 P T T+ +K P+I + S +L QPH L P L YP+ SPP+ RP Sbjct: 24 PQQAQTQTVQQQKFHLVPSINAVSGSQELQWMVQPHFLGPSGYPRPLTYPQYSPPQPRP 82
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0YN32 |
Definition |
tr|Q0YN32|Q0YN32_9DELT Putative uncharacterized protein OS=Geobacter sp. FRC-32 |
Align length |
61 |
Score (bit) |
37.0 |
E-value |
0.49 |
Report |
|