BP911928
Clone id YMU001_000010_H03
Library
Length 436
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATGTAGTCTTCAATAGGTCTACCTTTAGGGGGACTCAGCCTTGGGTAGTTGAGCCATAT
AGGAAGTTTCTTTAAAATCAACTGATGAGGCTGTCCCAGCTTTGCACTCTTGGCACTAGG
CAAAATGTTGGGTGCTTTCTCATATCCGATAGTGCTTGTGTGTAGAGGATGAGGTACTTA
GGATGTTTCTTTATCCAATGCATCCTCCAAGCTGGGTGTTGATCGGCATTGTTCGCAGCT
TGATCCTTGTTAAGTCTCTCCTTTACTTTGAGGATTTCATACTTGATGAGTAGATATGGG
AGAGACTGATGATGCCATGTATTTGTGATCTGCTTAGAAGTGAGCTACACTACATTGGTA
GAGTGGAGAATTTGTTGCTCCCACACTATGGCCTCTTTCCATATGTCTTCTATTCCTGAC
TCTATATTGACTTTAA
■■Homology search results ■■ -
sp_hit_id Q5KCF5
Definition sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans
Align length 27
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911928|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_H03.
(436 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45 OS=Cryptoco... 32 1.5
sp|Q8IUG5|MY18B_HUMAN Myosin-XVIIIb OS=Homo sapiens GN=MYO18B PE... 31 2.6
sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family prote... 30 3.3
sp|Q99JE6|PLCB3_RAT 1-phosphatidylinositol-4,5-bisphosphate phos... 30 4.4
sp|Q5F3L3|K1467_CHICK Uncharacterized protein KIAA1467 homolog O... 30 5.6
sp|Q8NGF9|OR4X2_HUMAN Olfactory receptor 4X2 OS=Homo sapiens GN=... 30 5.7
sp|Q01751|REGA_BPR69 Translation repressor protein OS=Enterobact... 29 7.3
sp|A5DI74|U507_PICGU UPF0507 protein PGUG_02975 OS=Pichia guilli... 29 9.8
sp|P78415|IRX3_HUMAN Iroquois-class homeodomain protein IRX-3 OS... 29 9.8
sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus G... 29 9.8

>sp|Q5KCF5|PRP45_CRYNE Pre-mRNA-processing protein 45
OS=Cryptococcus neoformans GN=PRP45 PE=3 SV=1
Length = 594

Score = 31.6 bits (70), Expect = 1.5
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2

Query: 177 VPHPLHTSTIGYEKAPNILPSAKSAKL 97
+P PLHTST YE+AP LP+ +L
Sbjct: 28 LPAPLHTSTTEYEEAPAPLPTTPGPQL 54


>sp|Q8IUG5|MY18B_HUMAN Myosin-XVIIIb OS=Homo sapiens GN=MYO18B PE=1
SV=1
Length = 2567

Score = 30.8 bits (68), Expect = 2.6
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = -2

Query: 276 NPQSKGET*QGS---SCEQCRSTPSLEDALDKET--S*VPHPLHTSTIGYEKAPNILPSA 112
N +S T GS S + S+P D L KE+ S P P ++I EKA + SA
Sbjct: 76 NSKSSSGTRSGSQQISQDDQSSSPGSSDILGKESEGSRSPDPEQMTSINGEKAQELGSSA 135

Query: 111 KSAKLGQPHQLILKKLPIWLNYPRLSPPKGRP 16
K P + +++ + L +L P +P
Sbjct: 136 TPTKKTVPFKRGVRRGDVLLMVAKLDPDSAKP 167


>sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein
C1F5.11c OS=Schizosaccharomyces pombe GN=SPAC1F5.11c PE=2
SV=1
Length = 3655

Score = 30.4 bits (67), Expect = 3.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3

Query: 407 DIWKEAIVWEQQILHSTNVV*L----TSKQITNTWHHQSLPYLLIKYEIL 270
DIW + I W Q + S N V L ++Q TN + S+ YL Y L
Sbjct: 2762 DIWSDLIAWRQSVFKSINKVFLPLVSIAQQSTNKSNTNSVSYLYRGYHEL 2811


>sp|Q99JE6|PLCB3_RAT 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase beta-3 OS=Rattus norvegicus GN=Plcb3
PE=1 SV=2
Length = 1234

Score = 30.0 bits (66), Expect = 4.4
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = -2

Query: 330 DHK-YMASSVSPISTHQV*NPQSK------GET*QGSSCEQCRSTPSLEDALDKETS*VP 172
DH+ Y + ++PI + + ++K GE+ +S E C+ TPS + ++ VP
Sbjct: 850 DHQDYAEALINPIKHVSLMDQRAKQLAALIGESEAQASTEMCQETPSQQQGSQLSSNPVP 909

Query: 171 HPLHTSTIGYEKAPNILPSAKSAKLGQPHQ 82
+PL S P S S L P Q
Sbjct: 910 NPLDDSP---RWPPGPTTSPTSTSLSSPGQ 936


>sp|Q5F3L3|K1467_CHICK Uncharacterized protein KIAA1467 homolog
OS=Gallus gallus GN=RCJMB04_14d19 PE=2 SV=1
Length = 623

Score = 29.6 bits (65), Expect = 5.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = -3

Query: 431 VNIESGIEDIWKEAIVWEQQILHSTNVV*LTSKQITNTWHHQSLPYL 291
V+ +SG+ +WK+ + W++Q L + +V+ L K + W ++ P L
Sbjct: 459 VDGKSGLP-VWKQELPWQKQQLDALSVMTLDKKSVFLFWADEAQPVL 504


>sp|Q8NGF9|OR4X2_HUMAN Olfactory receptor 4X2 OS=Homo sapiens
GN=OR4X2 PE=2 SV=1
Length = 303

Score = 29.6 bits (65), Expect = 5.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1

Query: 316 HVFVICLEVSYTTLVEWRIC 375
H IC +SYTT++ W++C
Sbjct: 114 HYVAICKPLSYTTIMNWQVC 133


>sp|Q01751|REGA_BPR69 Translation repressor protein
OS=Enterobacteria phage RB69 GN=regA PE=1 SV=1
Length = 122

Score = 29.3 bits (64), Expect = 7.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3

Query: 278 EILKVKERLNKDQAANNADQHPAWRMHWIKKHPKYLILYTQALSDM 141
+ LKVKE L + ANN D+ H ++K KY I++ + + M
Sbjct: 11 DFLKVKETLTRMGIANNKDKVLYQSCHILQKQGKYYIVHFKEMLRM 56


>sp|A5DI74|U507_PICGU UPF0507 protein PGUG_02975 OS=Pichia
guilliermondii GN=PGUG_02975 PE=3 SV=2
Length = 1133

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2

Query: 129 NILPSAKSAKLGQPHQLILKKLPIWLNYP 43
+I S S KL PH LI +WLNYP
Sbjct: 817 SIKQSHHSFKLKNPHSLIPDVEKVWLNYP 845


>sp|P78415|IRX3_HUMAN Iroquois-class homeodomain protein IRX-3
OS=Homo sapiens GN=IRX3 PE=2 SV=3
Length = 501

Score = 28.9 bits (63), Expect = 9.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2

Query: 147 GYEKAPNILPSAKSAKLGQPHQLI---LKKLPIWLNYPRLSPPKG 22
G AP+ L + +A H+L+ L K P W N P PP G
Sbjct: 375 GAAVAPSALQLSPAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPPG 419


>sp|P10158|FOSL1_RAT Fos-related antigen 1 OS=Rattus norvegicus
GN=Fosl1 PE=2 SV=1
Length = 275

Score = 28.9 bits (63), Expect = 9.8
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -2

Query: 174 PHPLHTSTIGYEK---APNILPSAKSAKLG---QPHQLILKKLPIWLNYPRLSPPKGRP 16
P T T+ +K P+I + S +L QPH L P L YP+ SPP+ RP
Sbjct: 24 PQQAQTQTVQQQKFHLVPSINAVSGSQELQWMVQPHFLGPSGYPRPLTYPQYSPPQPRP 82


tr_hit_id Q0YN32
Definition tr|Q0YN32|Q0YN32_9DELT Putative uncharacterized protein OS=Geobacter sp. FRC-32
Align length 61
Score (bit) 37.0
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911928|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_H03.
(436 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0YN32|Q0YN32_9DELT Putative uncharacterized protein OS=Geoba... 37 0.49
tr|Q8EWN7|Q8EWN7_MYCPE Putative uncharacterized protein MYPE1660... 32 1.6
tr|A4FJZ9|A4FJZ9_SACEN Bacteriophage (PhiC31) resistance gene Pg... 33 7.1
tr|A9S8D7|A9S8D7_PHYPA Predicted protein OS=Physcomitrella paten... 33 9.2

>tr|Q0YN32|Q0YN32_9DELT Putative uncharacterized protein
OS=Geobacter sp. FRC-32 GN=GeobDRAFT_2879 PE=4 SV=1
Length = 432

Score = 37.0 bits (84), Expect = 0.49
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2

Query: 243 SSCEQCRSTPSLEDALDKETS*VPHPLHTSTIGYEKAPNILPSAKSA---KLGQPHQLIL 73
++C +CR L D++DKETS P P P I PSA++A K GQP +L
Sbjct: 29 ATCPKCRQPFPLHDSIDKETSTAPRPPEVQ----PSPPPINPSAQAADQDKPGQPRPRML 84

Query: 72 K 70
+
Sbjct: 85 R 85


>tr|Q8EWN7|Q8EWN7_MYCPE Putative uncharacterized protein MYPE1660
OS=Mycoplasma penetrans GN=MYPE1660 PE=4 SV=1
Length = 457

Score = 32.0 bits (71), Expect(2) = 1.6
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -3

Query: 341 TSKQITNTWHHQSLPYLLIKYEILKVKERLNKDQAANNAD 222
T+ QITN S+ + LIK + VK++ NKD A NN D
Sbjct: 213 TNSQITNP----SIDFGLIKIDFSNVKDQKNKDSANNNDD 248



Score = 22.3 bits (46), Expect(2) = 1.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1

Query: 103 KAGTASSVDFKETSYMAQLPKA 38
K +++ +D+ ET YM P+A
Sbjct: 265 KFKSSNQIDYSETFYMGGFPEA 286


>tr|A4FJZ9|A4FJZ9_SACEN Bacteriophage (PhiC31) resistance gene PglZ
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=pglZ PE=4 SV=1
Length = 890

Score = 33.1 bits (74), Expect = 7.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2

Query: 95 PSFALLALGKMLGAFSYPIVLVCRG*GT*DVSLSNASSKLGVDR 226
P F + LG++L YP+V V G +SL N ++ G+D+
Sbjct: 846 PEFFMSVLGRLLNVDGYPVVSVVDGGARVKLSLENLRTQFGIDK 889


>tr|A9S8D7|A9S8D7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_75930 PE=4 SV=1
Length = 248

Score = 32.7 bits (73), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2

Query: 165 LHTSTIGYEKAPNILPSAKSAKLGQPHQL 79
LH + GY +P PS + ++GQPHQL
Sbjct: 90 LHEKSAGYRASPGTDPSMTAPRVGQPHQL 118