BP911929
Clone id YMU001_000010_H05
Library
Length 433
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000010_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACCAAAATTAATTTTTGCCGCCGATTAAGAATTATGCAGAAAAGCAAGTAATTTAGCGC
AGTAGATTGCCACCTACATAGATAAGGAGTAGATGAGACTTCCATTACCCATAACATAAT
CAGCCTGTGAGCTACCCGGAATAAACAGAAACTGCGTACAGTTTGTGCACAGAACTAACC
TCTTCAACAATTTTTACCTCCCAATTAGGTGAAGAGGAAGTGTATATTTGCACAACTAAT
CCAATTTTGAACCAGAAACACACTGCAGATCCCTTGTATAAGGATCAAGTACTTGAGCTC
CCATCTGAGGCTCATGACCATGTAATGCCTACGCATAAAGCAGCTGCTTAAAAAGAGCCC
GGTTTGGGGTTCCACACTCAGTGGAACTTTACCTTAGGGAGTAGTACAGAAGACGGTACC
GGAGGAGGGGGAC
■■Homology search results ■■ -
sp_hit_id Q5UPB7
Definition sp|Q5UPB7|YR044_MIMIV Uncharacterized protein R44 OS=Acanthamoeba polyphaga mimivirus
Align length 62
Score (bit) 35.0
E-value 0.13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911929|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_H05.
(433 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5UPB7|YR044_MIMIV Uncharacterized protein R44 OS=Acanthamoeb... 35 0.13
sp|P34103|PK4_DICDI Protein kinase 4 (Fragment) OS=Dictyostelium... 30 3.3
sp|Q02554|CUS1_YEAST Protein CUS1 OS=Saccharomyces cerevisiae GN... 30 4.3
sp|Q69ZU6|THS7A_MOUSE Thrombospondin type-1 domain-containing pr... 30 5.6
sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=... 29 9.6

>sp|Q5UPB7|YR044_MIMIV Uncharacterized protein R44 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R44 PE=3 SV=1
Length = 215

Score = 35.0 bits (79), Expect = 0.13
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1

Query: 115 HNQ-PVSYPE*TETAYSLCTELTSSTIFTSQLGEEEVYICTTNPILNQKHTADPLYKDQV 291
+NQ P+ Y E + ++CTEL S F S L E++ Y+ N IL + + + K ++
Sbjct: 30 YNQIPLDYAEMNKIYKNICTELDDSPEFQSNLTEDDEYVYKFNEILKKCYDEQEMTKRKI 89

Query: 292 LE 297
+
Sbjct: 90 FD 91


>sp|P34103|PK4_DICDI Protein kinase 4 (Fragment) OS=Dictyostelium
discoideum GN=pkgD PE=3 SV=2
Length = 992

Score = 30.4 bits (67), Expect = 3.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1

Query: 145 FIPGSSQADYVMGNGSLIYSLSM*VAIYCAKLLAFLHN 32
FIPG DY+ NGSL ++ A L +LHN
Sbjct: 758 FIPGGELFDYIRANGSLSLYVTQIYAAEIVLALEYLHN 795


>sp|Q02554|CUS1_YEAST Protein CUS1 OS=Saccharomyces cerevisiae
GN=CUS1 PE=1 SV=1
Length = 436

Score = 30.0 bits (66), Expect = 4.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1

Query: 220 VYICTTNPILNQKHTADPLYKDQVLELPSEAHDHVMPTHKAAA*KEPGL 366
V I NP++N+KHTA+ D++ + PS+ + + K ++P L
Sbjct: 90 VVIVEKNPVMNRKHTAE----DELEDTPSDGIEEHLSARKRRKTEKPSL 134


>sp|Q69ZU6|THS7A_MOUSE Thrombospondin type-1 domain-containing
protein 7A OS=Mus musculus GN=Thsd7a PE=2 SV=2
Length = 1645

Score = 29.6 bits (65), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1

Query: 241 PILNQKHTADPLYKDQVLELPSEAHDHVMPTHK 339
P K +DPLY+++ E P H + THK
Sbjct: 796 PANGGKECSDPLYEEKACEAPPTCHSYRWKTHK 828


>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8
OS=Neurospora crassa GN=sec-8 PE=3 SV=1
Length = 1111

Score = 28.9 bits (63), Expect = 9.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1

Query: 205 LGEEEVYICTTNPILNQKHTADPLYKDQVLELPSEAHD 318
L + +CTTNP L Q H +Y D VL+ +E D
Sbjct: 176 LAASKTALCTTNPELKQLHATSRMY-DGVLQTLNELDD 212


tr_hit_id B7G4E6
Definition tr|B7G4E6|B7G4E6_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length 53
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911929|Adiantum capillus-veneris mRNA, clone:
YMU001_000010_H05.
(433 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7G4E6|B7G4E6_PHATR Predicted protein OS=Phaeodactylum tricor... 35 1.9
tr|B6RD08|B6RD08_PHATR Death-specific protein OS=Phaeodactylum t... 35 1.9
tr|A8HZN6|A8HZN6_AZOC5 Putative uncharacterized protein OS=Azorh... 33 9.3
tr|Q1EPR6|Q1EPR6_BOMMO Membrane protein TMS1 OS=Bombyx mori GN=T... 33 9.3
tr|A0DWY8|A0DWY8_PARTE Chromosome undetermined scaffold_679, who... 33 9.3
tr|A2QF00|A2QF00_ASPNC Catalytic activity: gentisate 1 OS=Asperg... 33 9.3

>tr|B7G4E6|B7G4E6_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_37918 PE=4 SV=1
Length = 244

Score = 35.0 bits (79), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1

Query: 151 TAYSLCTELTSSTIFTSQLGEEEVYICTTNPILNQKHTADPLYKDQVLELPSE 309
T+ +LC LTSS+ FT + Y C L ++ D +Y +E+PS+
Sbjct: 5 TSIALCAMLTSSSAFTPTFSSPKQYTCLRMSDLPRQAIPDSIYMQIAMEIPSK 57


>tr|B6RD08|B6RD08_PHATR Death-specific protein OS=Phaeodactylum
tricornutum PE=2 SV=1
Length = 244

Score = 35.0 bits (79), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1

Query: 151 TAYSLCTELTSSTIFTSQLGEEEVYICTTNPILNQKHTADPLYKDQVLELPSE 309
T+ +LC LTSS+ FT + Y C L ++ D +Y +E+PS+
Sbjct: 5 TSIALCAMLTSSSAFTPTFSSPKQYTCLRMSDLPRQAIPDSIYMQIAMEIPSK 57


>tr|A8HZN6|A8HZN6_AZOC5 Putative uncharacterized protein
OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=AZC_4606 PE=4 SV=1
Length = 887

Score = 32.7 bits (73), Expect = 9.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2

Query: 402 TP*GKVPLSVEPQTGLFLSSCFMRRHYMVMSLRWELKY--LILIQGICSVFLVQNW 241
TP GK P +VE Q L +R ++V WE + L+L+ ++FLV +W
Sbjct: 4 TPDGKTPRTVEAQAARALEQALVRARHVVF---WERAWPPLVLVAVAVALFLVASW 56


>tr|Q1EPR6|Q1EPR6_BOMMO Membrane protein TMS1 OS=Bombyx mori GN=TMS1
PE=2 SV=1
Length = 453

Score = 32.7 bits (73), Expect = 9.3
Identities = 23/92 (25%), Positives = 37/92 (40%)
Frame = -2

Query: 303 WELKYLILIQGICSVFLVQNWISCANIHFLFT*LGGKNC*RG*FCAQTVRSFCLFRVAHR 124
W +KYL++I GI F + A+ +F +GG FC ++ + AH
Sbjct: 136 WAIKYLLVIGGIIGAFFIPGG-QFASTWMVFGMIGG-------FCYIVIQLILIIDFAHS 187

Query: 123 LIMLWVMEVSSTPYLCRWQSTALNYLLFCIIL 28
+WV+ +T N LF + L
Sbjct: 188 WAEIWVLNTKRQNRRMVCSTTDFNADLFALTL 219


>tr|A0DWY8|A0DWY8_PARTE Chromosome undetermined scaffold_679, whole
genome shotgun sequence. (Fragment) OS=Paramecium
tetraurelia GN=GSPATT00039819001 PE=4 SV=1
Length = 338

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -2

Query: 126 RLIMLWVMEVSSTPYLCRWQSTALNYLLFCIILNRRQKLIL 4
+LI++W+M S+ ++C+++ N ++C++LN + LI+
Sbjct: 235 KLIIIWIMNPSNQ-WVCQYKLIGHNSNIYCLVLNNNEDLII 274


>tr|A2QF00|A2QF00_ASPNC Catalytic activity: gentisate 1
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An02g12800 PE=4 SV=1
Length = 335

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1

Query: 175 LTSSTIFTSQLGEEEVYICTTNPILNQKHTADPLYKDQVLELPSE---AHDHV 324
+ S TI T++ E V + NP ++ HT D +Y L LP E AH HV
Sbjct: 59 MKSGTIITAEEAERRV-LMLVNPNMDAPHTTDTIYGGLQLVLPGETAPAHRHV 110