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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911945
Clone id YMU001_000011_B05
Library
Length 537
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAAGAGGAAATTCTCAAGCAGGTTAGCGAACTTTTGGAGAAGGGCTTAATAAGGCCTAG
TACTTCTCCATATTGTTCACCTGTCTTGCTAGTACAGAAAAAGGATGGCACATTCCGCAT
GTGCATAGACTATAGATCTCTAAACAAGATCACAATCAAGAATCGATTTCCAATCCCTCG
GATTGACGACATTCTTGATAAGTTACAAGGAGCCAGTGTCTTTAGTCGTATAGACTCGAA
GAGCGGTTATCATCAAATCCGCATAGCTCCTCAGGATGTGCATAAGACTTCATTTAGAAC
AACCTTCGGGTTGTATGAATTCTTAGTGATGCCTTTTGGACTCACTAATGCACCAACTAC
ATTCAACAGAATGATGGATAGAATCTTCCACTCATATAGAAGTTTTACAGGCGTTTTCTT
TGATGACGTCTTAATCTTCTCAGAGTCGGAAGACGAACACTATAAGCATCTTGCCTTAGT
GTGTGAAGAATTACGCAAACACAAACTATTTGTGAATTATTGTGAGACACTATATGG
■■Homology search results ■■ -
sp_hit_id Q7LHG5
Definition sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 171
Score (bit) 186.0
E-value 8.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911945|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_B05.
         (537 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...   186   8e-47
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...   186   8e-47
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...   154   3e-37
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...   149   6e-36
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...   142   8e-34
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...   141   2e-33
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...   138   1e-32
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...   138   1e-32
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ...   137   4e-32
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ...   137   4e-32
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ...   136   6e-32
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ...   134   2e-31
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ...   132   8e-31
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...   130   3e-30
sp|P31843|RRPO_OENBE RNA-directed DNA polymerase homolog OS=Oeno...   130   5e-30
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...   123   5e-28
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot...   120   4e-27
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus...   119   7e-27
sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf...   114   2e-25
sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic m...   108   1e-23
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin...   100   8e-21
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing...    99   2e-20
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing...    98   3e-20
sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform vi...    87   4e-17
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha...    86   9e-17
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p...    68   3e-11
sp|P63134|POK9_HUMAN HERV-K_5q13.3 provirus ancestral Pol protei...    63   1e-09
sp|P31623|POL_JSRV Pol polyprotein OS=Sheep pulmonary adenomatos...    62   1e-09
sp|Q9QC07|POK7_HUMAN HERV-K_1q23.3 provirus ancestral Pol protei...    62   2e-09
sp|P63133|POK6_HUMAN HERV-K_8p23.1 provirus ancestral Pol protei...    62   2e-09

>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score =  186 bits (471), Expect = 8e-47
 Identities = 92/171 (53%), Positives = 120/171 (70%)
 Frame = +2

Query: 2    QEEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPR 181
            ++EI K V +LL+   I PS SP  SPV+LV KKDGTFR+C+DYR+LNK TI + FP+PR
Sbjct: 635  EQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPR 694

Query: 182  IDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTT 361
            ID++L ++  A +F+ +D  SGYHQI + P+D +KT+F T  G YE+ VMPFGL NAP+T
Sbjct: 695  IDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPST 754

Query: 362  FNRMMDRIFHSYRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFV 514
            F R M   F   R F  V+ DD+LIFSES +EH+KHL  V E L+   L V
Sbjct: 755  FARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIV 804


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score =  186 bits (471), Expect = 8e-47
 Identities = 92/171 (53%), Positives = 120/171 (70%)
 Frame = +2

Query: 2    QEEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPR 181
            ++EI K V +LL+   I PS SP  SPV+LV KKDGTFR+C+DYR+LNK TI + FP+PR
Sbjct: 609  EQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPR 668

Query: 182  IDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTT 361
            ID++L ++  A +F+ +D  SGYHQI + P+D +KT+F T  G YE+ VMPFGL NAP+T
Sbjct: 669  IDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPST 728

Query: 362  FNRMMDRIFHSYRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFV 514
            F R M   F   R F  V+ DD+LIFSES +EH+KHL  V E L+   L V
Sbjct: 729  FARYMADTFRDLR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIV 778


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score =  154 bits (389), Expect = 3e-37
 Identities = 84/185 (45%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
 Frame = +2

Query: 2   QEEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGT-----FRMCIDYRSLNKITIKNR 166
           ++E+  Q+ ++L +G+IR S SPY SP+ +V KK        FR+ IDYR LN+IT+ +R
Sbjct: 220 EQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDR 279

Query: 167 FPIPRIDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLT 346
            PIP +D+IL KL   + F+ ID   G+HQI + P+ V KT+F T  G YE+L MPFGL 
Sbjct: 280 HPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLK 339

Query: 347 NAPTTFNRMMDRIFHS-YRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKH--KLFVN 517
           NAP TF R M+ I          V+ DD+++FS S DEH + L LV E+L K   KL ++
Sbjct: 340 NAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLD 399

Query: 518 YCETL 532
            CE L
Sbjct: 400 KCEFL 404


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
           transposon opus OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1003

 Score =  149 bits (377), Expect = 6e-36
 Identities = 78/176 (44%), Positives = 109/176 (61%), Gaps = 6/176 (3%)
 Frame = +2

Query: 8   EILKQVSELLEKGLIRPSTSPYCSPVLLVQKK-----DGTFRMCIDYRSLNKITIKNRFP 172
           E+ +Q+ ELL+ G+IRPS SPY SP+ +V KK     +  +RM +D++ LN +TI + +P
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 173 IPRIDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNA 352
           IP I+  L  L  A  F+ +D  SG+HQI +   D+ KT+F T  G YEFL +PFGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 353 PTTFNRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
           P  F RM+D I   +      V+ DD+++FSE  D H+K+L LV   L K  L VN
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVN 313


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score =  142 bits (359), Expect = 8e-34
 Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 8/183 (4%)
 Frame = +2

Query: 8   EILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGT-----FRMCIDYRSLNKITIKNRFP 172
           E+  QV E+L +GLIR S SPY SP  +V KK        +R+ IDYR LN+ITI +R+P
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 173 IPRIDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNA 352
           IP +D+IL KL     F+ ID   G+HQI +  + + KT+F T  G YE+L MPFGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 353 PTTFNRMMDRIFHS-YRSFTGVFFDDVLIFSESEDEHYKHLALVCEEL--RKHKLFVNYC 523
           P TF R M+ I          V+ DD++IFS S  EH   + LV  +L     KL ++ C
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 524 ETL 532
           E L
Sbjct: 401 EFL 403


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score =  141 bits (356), Expect = 2e-33
 Identities = 67/167 (40%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 20  QVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRIDDILD 199
           ++++ L+ G+IR S +    PV+ V KK+GT RM +DY+ LNK    N +P+P I+ +L 
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLA 490

Query: 200 KLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTFNRMMD 379
           K+QG+++F+++D KS YH IR+   D HK +FR   G++E+LVMP+G++ AP  F   ++
Sbjct: 491 KIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFIN 550

Query: 380 RIF-HSYRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
            I   +  S    + DD+LI S+SE EH KH+  V ++L+   L +N
Sbjct: 551 TILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIIN 597


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score =  138 bits (348), Expect = 1e-32
 Identities = 66/167 (39%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 20  QVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRIDDILD 199
           ++++ L+ G+IR S +    PV+ V KK+GT RM +DY+ LNK    N +P+P I+ +L 
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLA 490

Query: 200 KLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTFNRMMD 379
           K+QG+++F+++D KS YH IR+   D HK +FR   G++E+LVMP+G++ AP  F   ++
Sbjct: 491 KIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFIN 550

Query: 380 RIFHSYR-SFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
            I    + S    + D++LI S+SE EH KH+  V ++L+   L +N
Sbjct: 551 TILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIIN 597


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score =  138 bits (348), Expect = 1e-32
 Identities = 66/167 (39%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 20  QVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRIDDILD 199
           ++++ L+ G+IR S +    PV+ V KK+GT RM +DY+ LNK    N +P+P I+ +L 
Sbjct: 431 EINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLA 490

Query: 200 KLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTFNRMMD 379
           K+QG+++F+++D KS YH IR+   D HK +FR   G++E+LVMP+G++ AP  F   ++
Sbjct: 491 KIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFIN 550

Query: 380 RIFHSYR-SFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
            I    + S    + D++LI S+SE EH KH+  V ++L+   L +N
Sbjct: 551 TILGEVKESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANLIIN 597


>sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic
           virus (strain BBC) GN=ORF V PE=3 SV=1
          Length = 679

 Score =  137 bits (344), Expect = 4e-32
 Identities = 65/176 (36%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
 Frame = +2

Query: 2   QEEILKQVSELLEKGLIRPSTSPYCSPVLLV----QKKDGTFRMCIDYRSLNKITIKNRF 169
           +EE  KQ+ ELL+  +I+PS SP+ +P  LV    +K+ G  RM ++Y+++NK TI + +
Sbjct: 259 REEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAY 318

Query: 170 PIPRIDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTN 349
            +P  D++L  ++G  +FS  D KSG+ Q+ +  +    T+F    G YE+ V+PFGL  
Sbjct: 319 NLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQ 378

Query: 350 APTTFNRMMDRIFHSYRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
           AP+ F R MD  F  +R F  V+ DD+L+FS +E++H  H+A++ ++  +H + ++
Sbjct: 379 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILS 434


>sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic
           virus (strain CM-1841) GN=ORF V PE=3 SV=1
          Length = 679

 Score =  137 bits (344), Expect = 4e-32
 Identities = 65/176 (36%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
 Frame = +2

Query: 2   QEEILKQVSELLEKGLIRPSTSPYCSPVLLV----QKKDGTFRMCIDYRSLNKITIKNRF 169
           +EE  KQ+ ELL+  +I+PS SP+ +P  LV    +K+ G  RM ++Y+++NK TI + +
Sbjct: 259 REEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAY 318

Query: 170 PIPRIDDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTN 349
            +P  D++L  ++G  +FS  D KSG+ Q+ +  +    T+F    G YE+ V+PFGL  
Sbjct: 319 NLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCPQGHYEWNVVPFGLKQ 378

Query: 350 APTTFNRMMDRIFHSYRSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVN 517
           AP+ F R MD  F  +R F  V+ DD+L+FS +E++H  H+A++ ++  +H + ++
Sbjct: 379 APSIFQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHLLHVAMILQKCNQHGIILS 434
tr_hit_id Q2R4W7
Definition tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica
Align length 177
Score (bit) 222.0
E-value 8.0e-57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911945|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_B05.
         (537 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gy...   222   8e-57
tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gy...   221   1e-56
tr|Q0D6S9|Q0D6S9_ORYSJ Os07g0444200 protein OS=Oryza sativa subs...   221   2e-56
tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   221   2e-56
tr|Q53QL2|Q53QL2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   220   3e-56
tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon pro...   219   5e-56
tr|Q7XRV6|Q7XRV6_ORYSJ OSJNBb0049I21.5 protein OS=Oryza sativa s...   219   7e-56
tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   219   7e-56
tr|Q53L81|Q53L81_ORYSJ Retrotransposon protein, putative, Ty3-gy...   218   1e-55
tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ...   218   1e-55
tr|Q7XXI2|Q7XXI2_ORYSJ OSJNBa0059H15.7 protein OS=Oryza sativa s...   218   2e-55
tr|Q7XX57|Q7XX57_ORYSJ OSJNBb0049I21.6 protein OS=Oryza sativa s...   218   2e-55
tr|Q2RB45|Q2RB45_ORYSJ Retrotransposon protein, putative, Ty3-gy...   218   2e-55
tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gy...   218   2e-55
tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa s...   218   2e-55
tr|Q2QSS9|Q2QSS9_ORYSJ Retrotransposon protein, putative, Ty3-gy...   218   2e-55
tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1   218   2e-55
tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa G...   218   2e-55
tr|Q7XZG5|Q7XZG5_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...   217   3e-55
tr|Q75HH6|Q75HH6_ORYSJ Putative polyprotein (Retrotransposon pro...   217   3e-55
tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa s...   216   5e-55
tr|Q53MS2|Q53MS2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   216   5e-55
tr|Q8W5B7|Q8W5B7_ORYSA Putative polyprotein OS=Oryza sativa GN=O...   216   6e-55
tr|Q10GH3|Q10GH3_ORYSJ Retrotransposon protein, putative, Ty3-gy...   216   6e-55
tr|Q94I04|Q94I04_ORYSA Putative retroelement OS=Oryza sativa GN=...   216   8e-55
tr|Q53PB2|Q53PB2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   216   8e-55
tr|Q33A27|Q33A27_ORYSJ Retrotransposon protein, putative, Ty3-gy...   216   8e-55
tr|Q65WY1|Q65WY1_ORYSJ Putative polyprotein OS=Oryza sativa subs...   215   1e-54
tr|Q2R3T2|Q2R3T2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   215   1e-54
tr|Q7XKY8|Q7XKY8_ORYSJ OSJNBa0022F16.16 protein OS=Oryza sativa ...   214   2e-54

>tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g27050 PE=4 SV=1
          Length = 1469

 Score =  222 bits (566), Expect = 8e-57
 Identities = 103/177 (58%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 556  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSIRMCVDYRSLNEVTIKNKYPLPRI 615

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I  +D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 616  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTRDIPKTAFSTRYGLYEFTVMSFGLTNAPAYF 675

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +  CE
Sbjct: 676  MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLQLVLEKLRKHKLYAKFSKCE 732


>tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g28690 PE=4 SV=1
          Length = 1470

 Score =  221 bits (564), Expect = 1e-56
 Identities = 102/177 (57%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 556  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRI 615

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I  +D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 616  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYF 675

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV ++LRKHKL+  +  CE
Sbjct: 676  MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732


>tr|Q0D6S9|Q0D6S9_ORYSJ Os07g0444200 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0444200 PE=4 SV=1
          Length = 1316

 Score =  221 bits (563), Expect = 2e-56
 Identities = 103/177 (58%), Positives = 139/177 (78%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5   EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
           EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 405 EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRI 464

Query: 185 DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
           DD+ D+L+GA VFS+ID +SGYHQ++I   D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 465 DDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYF 524

Query: 365 NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
             +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +  CE
Sbjct: 525 MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCE 581


>tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g18320 PE=4 SV=1
          Length = 1226

 Score =  221 bits (562), Expect = 2e-56
 Identities = 103/177 (58%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5   EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
           EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG  RMC+DYRSLN++TIKN++P+PRI
Sbjct: 405 EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGCIRMCVDYRSLNEVTIKNKYPLPRI 464

Query: 185 DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
           DD+ D+L+GA VFS+ID +SGYHQ++I   D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 465 DDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTTFSTRYGLYEFTVMSFGLTNAPAYF 524

Query: 365 NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
             +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +  CE
Sbjct: 525 MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCE 581


>tr|Q53QL2|Q53QL2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g19910 PE=4 SV=1
          Length = 1436

 Score =  220 bits (561), Expect = 3e-56
 Identities = 103/177 (58%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 556  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRI 615

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I   DV KT+F T +GLYEF VM FGLTN P  F
Sbjct: 616  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDVPKTAFSTRYGLYEFTVMSFGLTNTPAYF 675

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +  CE
Sbjct: 676  MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHVEHLRLVLEKLRKHKLYAKFSKCE 732


>tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty3-gypsy subclass) OS=Oryza sativa subsp.
            japonica GN=OSJNBa0034B05.13 PE=4 SV=1
          Length = 1569

 Score =  219 bits (559), Expect = 5e-56
 Identities = 103/177 (58%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+P I
Sbjct: 655  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPWI 714

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I   D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 715  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYF 774

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ EDEH +HL LV E+LRKHKL+  +  CE
Sbjct: 775  MNLMNKVFMDYLDKFVVVFIDDILIYSKDEDEHAEHLRLVLEKLRKHKLYAKFSKCE 831


>tr|Q7XRV6|Q7XRV6_ORYSJ OSJNBb0049I21.5 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBb0049I21.5 PE=4 SV=2
          Length = 1644

 Score =  219 bits (558), Expect = 7e-56
 Identities = 102/177 (57%), Positives = 139/177 (78%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 646  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRI 705

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I   D+ KT+F T +GLY+F VM FGLTNAP  F
Sbjct: 706  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLYKFTVMSFGLTNAPAYF 765

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +  CE
Sbjct: 766  MNLMNKVFMDYLDKFMVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCE 822


>tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os10g28930 PE=4 SV=1
          Length = 1470

 Score =  219 bits (558), Expect = 7e-56
 Identities = 101/177 (57%), Positives = 139/177 (78%), Gaps = 3/177 (1%)
 Frame = +2

Query: 5    EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
            EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKD + RMC+DYRSLN++TIKN++P+PRI
Sbjct: 556  EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDSSMRMCVDYRSLNEVTIKNKYPLPRI 615

Query: 185  DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
            DD+ D+L+GA VFS+ID +SGYHQ++I  +D+ KT+F T +GLYEF VM FGLTNAP  F
Sbjct: 616  DDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYF 675

Query: 365  NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
              +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV ++LRKHKL+  +  CE
Sbjct: 676  MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCE 732


>tr|Q53L81|Q53L81_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g24000 PE=4 SV=1
          Length = 1158

 Score =  218 bits (556), Expect = 1e-55
 Identities = 100/173 (57%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
 Frame = +2

Query: 5   EEILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRI 184
           EE+ KQ+ EL EKG +RPS+SP+ +PVL V+KKDG+ RMC+DYRSLN++TIKN++P+PRI
Sbjct: 436 EELKKQIRELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRI 495

Query: 185 DDILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTF 364
           DD+ D+L+GA VFS+ID +SGYHQ++I   D+ KT+F T +GLYEF V+ FGLTNAP  F
Sbjct: 496 DDLFDQLKGAKVFSKIDLQSGYHQLKIRTGDIPKTAFSTHYGLYEFTVISFGLTNAPAYF 555

Query: 365 NRMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY 520
             +M+++F  Y   F  VF DD+LI+S+ E+EH +HL LV E+LRKHKL+  +
Sbjct: 556 MNLMNKVFMDYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKF 608


>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4
            SV=1
          Length = 1501

 Score =  218 bits (556), Expect = 1e-55
 Identities = 103/176 (58%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
 Frame = +2

Query: 8    EILKQVSELLEKGLIRPSTSPYCSPVLLVQKKDGTFRMCIDYRSLNKITIKNRFPIPRID 187
            E+  Q+ ELL+KG IRPS SP+ +PVL V+KKDG+ R+CIDYR LN +TIKN++P+PRID
Sbjct: 575  ELKTQLQELLDKGYIRPSASPWGAPVLFVKKKDGSMRLCIDYRELNNVTIKNKYPLPRID 634

Query: 188  DILDKLQGASVFSRIDSKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPTTFN 367
            D+ D+L GASVFS+ID +SGYHQ+R+A +DV KT+FRT +G YEF VMPFGLTNAP  F 
Sbjct: 635  DLFDQLNGASVFSKIDLRSGYHQLRVADKDVPKTAFRTRYGHYEFTVMPFGLTNAPAIFM 694

Query: 368  RMMDRIFHSY-RSFTGVFFDDVLIFSESEDEHYKHLALVCEELRKHKLFVNY--CE 526
             +M+RIFH +   F  VF DD+LI+S +E EH +HL ++ E LRK++L+  +  CE
Sbjct: 695  DLMNRIFHEFLDKFVVVFIDDILIYSRNETEHDEHLRIILETLRKNQLYAKFSKCE 750