| BP911948 |
| Clone id |
YMU001_000011_B08 |
| Library |
YMU01 |
| Length |
539 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000011_B08. |
| Accession |
BP911948 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CTGGCTGAGAATAAACTACATATCAGTATTTGTAGGGATCTAATAAATCGGGGTTGAACA
GCTCTTCGAAATGAGATTTGATGTGGATCTTGCAAAGGAGCTCTTGCGGGCGTCAGGCAG
CCCGCAAAGAGAGCTCATCAATGAATGGCTCGTTAGAGCCTGTACTTGCTACTGTTGCTG
GCTGCGACACAGCTGGCTGTGTGTCATATGTGGCCTTTACGCCACCTGGACCAAAAAAAC
ATTTGCTGGTCTTTGTCGCCAAATAGTCCTCGATGATACACAATGGTTTTACCATGCCTT
GCGGATTGAGCCTCGCTCGAGCTGCCTCCTTGTCTGACCAACAAGGGTTGACAAGAGACA
CCGCAATGTTGATGCCGATCAGCTTCTTGGTCTCCAAGCTGAAAACCGGACCACCTATAC
AAAACAATGCTCTTAAGAAAGTAATCGTGAATTTTGTTCCCATTCTAACATAGAAACATA
ACACTATTCTCCTTACCAGAATCACCTGGCACGCTTCCTCCGCTCGTGGCTACGGTCGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8K2K6 |
| Definition |
sp|Q8K2K6|AGFG1_MOUSE Arf-GAP domain and FG repeats-containing protein 1 OS=Mus musculus |
| Align length |
91 |
| Score (bit) |
34.3 |
| E-value |
0.4 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q4S496 |
| Definition |
tr|Q4S496|Q4S496_TETNG Chromosome 1 SCAF14742, whole genome shotgun sequence OS=Tetraodon nigroviridis |
| Align length |
73 |
| Score (bit) |
34.3 |
| E-value |
4.3 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911948|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_B08.
(539 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q4S496|Q4S496_TETNG Chromosome 1 SCAF14742, whole genome shot... 34 4.3
tr|Q197Y3|Q197Y3_9BACT Polyphosphate kinase (Fragment) OS=uncult... 34 5.6
tr|B3TL10|B3TL10_9HEPC Polyprotein OS=Hepatitis C virus subtype ... 33 7.3
tr|B3TKE6|B3TKE6_9HEPC Polyprotein OS=Hepatitis C virus subtype ... 33 7.3
tr|B5Y5B3|B5Y5B3_PHATR Predicted protein OS=Phaeodactylum tricor... 33 7.3
tr|A3VU82|A3VU82_9PROT Putative uncharacterized protein OS=Parvu... 33 9.5
tr|B3M6B8|B3M6B8_DROAN GF10168 OS=Drosophila ananassae GN=GF1016... 33 9.5
>tr|Q4S496|Q4S496_TETNG Chromosome 1 SCAF14742, whole genome shotgun
sequence OS=Tetraodon nigroviridis GN=GSTENG00024279001
PE=4 SV=1
Length = 2660
Score = 34.3 bits (77), Expect = 4.3
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 117 AARKESSSMNGSLEPVLATVAGCDTAGCV----SYVAFTPPGPKKHLLVFVAK*SSMIHN 284
A R + G L+ + G + A C S +A T P KH +VF+ K + ++H
Sbjct: 1617 ARRVRVWNREGVLQATSEAIDGLEEALCWKPSGSLIASTRRHPNKHSVVFLEK-NGLLHG 1675
Query: 285 GFTMPCGLSLARA 323
FT+P G A+A
Sbjct: 1676 DFTLPLGRDRAKA 1688
Score = 33.9 bits (76), Expect = 5.6
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 117 AARKESSSMNGSLEPVLATVAGCDTAGCV----SYVAFTPPGPKKHLLVFVAK*SSMIHN 284
A R + G L+ + G + A C S +A T P KH +VF+ K + ++H
Sbjct: 219 ARRVRVWNREGVLQATSEAIDGLEEALCWKPSGSLIASTRRHPNKHSVVFLEK-NGLLHG 277
Query: 285 GFTMPCGLSLARAASL 332
FT+P G A+ L
Sbjct: 278 DFTLPLGRDRAKVKDL 293
>tr|Q197Y3|Q197Y3_9BACT Polyphosphate kinase (Fragment)
OS=uncultured bacterium GN=ppk PE=3 SV=1
Length = 403
Score = 33.9 bits (76), Expect = 5.6
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -2
Query: 220 VKATYDTQPAVSQPATVASTGSNEPFIDELSLRAA*RPQELLCKIHIKSHFEE 62
++ D ++ T+ TG N PFI L +RAA + ++++C + +K+ F+E
Sbjct: 304 IRTACDDPKVLAIKMTLYRTGDNSPFIRSL-IRAAEQGKQVVCLVELKARFDE 355
>tr|B3TL10|B3TL10_9HEPC Polyprotein OS=Hepatitis C virus subtype 1a
PE=4 SV=1
Length = 3011
Score = 33.5 bits (75), Expect = 7.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 137 INEWLVRACTCYCC--WLRH--SWLCVICGLYATWTK 235
+++W+ CT CC WLR W+C + + TW K
Sbjct: 1960 LHQWISSECTTPCCTSWLRDIWDWICEVLSDFKTWLK 1996
>tr|B3TKE6|B3TKE6_9HEPC Polyprotein OS=Hepatitis C virus subtype 1a
PE=4 SV=1
Length = 3011
Score = 33.5 bits (75), Expect = 7.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 137 INEWLVRACTCYCC--WLRH--SWLCVICGLYATWTK 235
+++W+ CT CC WLR W+C + + TW K
Sbjct: 1960 LHQWISSECTTPCCGSWLRDIWDWICEVLSDFKTWLK 1996
>tr|B5Y5B3|B5Y5B3_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATR_10531 PE=4 SV=1
Length = 512
Score = 33.5 bits (75), Expect = 7.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = -2
Query: 334 DKEAARARLNPQGMVKPLCIIEDYLATKTSKCFFG--------PGGVKATYDTQPAVSQP 179
+K+ R RL + +P+ +ED T+TS+ F GG KA+ DT A S
Sbjct: 263 EKKRLRKRLKKKRQKEPITSVEDSAETRTSRSTFSELDSAGFKEGGKKASGDTSTAPSSR 322
Query: 178 ATVASTGS 155
T AS+ +
Sbjct: 323 DTSASSAA 330
>tr|A3VU82|A3VU82_9PROT Putative uncharacterized protein
OS=Parvularcula bermudensis HTCC2503 GN=PB2503_11559
PE=4 SV=1
Length = 503
Score = 33.1 bits (74), Expect = 9.5
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = -2
Query: 334 DKEAARARLNPQGMVKPLCIIEDYLATKTSKCFFGPG------GVKATYDTQPAVSQPAT 173
D+EAA RL+ PL D AT T+K FF P +KATY V+
Sbjct: 177 DEEAAHRRLDSLARTSPLAYRYDEPATATTKHFFAPKSLAALLSLKATYPNATLVAGATD 236
Query: 172 VA 167
VA
Sbjct: 237 VA 238
>tr|B3M6B8|B3M6B8_DROAN GF10168 OS=Drosophila ananassae GN=GF10168
PE=4 SV=1
Length = 1301
Score = 33.1 bits (74), Expect = 9.5
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -2
Query: 331 KEAARARLNPQGMVKPLCIIEDYLATKTSKCFFGPGGVKATYDTQPAVSQPATVAS---T 161
K+ A AR P ++PL +++ L + + P +++ +DTQ A S +T+A+
Sbjct: 879 KQNAAARPPPSDQLQPLALVQPKLEEPSRQEISLPDPIESDFDTQSANSDTSTMATHDFN 938
Query: 160 GSNEPFIDEL 131
G ++ D+L
Sbjct: 939 GEDDDVFDDL 948
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