BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911954|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C04.
         (512 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P47066|YJC2_YEAST Putative uncharacterized protein YJL009W OS...    32   1.7  
sp|O94669|AP3M_SCHPO AP-3 complex subunit mu OS=Schizosaccharomy...    31   3.8  
sp|O63852|MSHM_SARGL Mitochondrial DNA mismatch repair protein m...    30   5.0  
sp|Q36724|COX1_BLAGE Cytochrome c oxidase subunit 1 (Fragment) O...    30   6.5  
sp|A1W0U9|HIS51_CAMJJ Imidazole glycerol phosphate synthase subu...    30   8.5  

>sp|P47066|YJC2_YEAST Putative uncharacterized protein YJL009W
           OS=Saccharomyces cerevisiae GN=YJL022W PE=5 SV=1
          Length = 102

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 153 LVFTQFQCTNKLPNSCFRRYKLVPSSIFFIVLHYKK 260
           +VF+ F+ T + P S FRR      S+FF+ ++++K
Sbjct: 33  IVFSAFKHTAEFPESLFRRSPRERGSVFFVTINFEK 68


>sp|O94669|AP3M_SCHPO AP-3 complex subunit mu OS=Schizosaccharomyces
           pombe GN=apm3 PE=2 SV=1
          Length = 425

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = +1

Query: 115 DVAP*LTSFFLTNWYLHNSNVQTNFPTLASDAISWFQVRSSS*FYITRSFII 270
           D+ P L SF   N ++  + +QTN PTLA D + W   R++   Y T  F I
Sbjct: 135 DIVP-LPSFM--NKFMAVTGLQTNTPTLARDTVPW---RTAKAKYATNEFFI 180


>sp|O63852|MSHM_SARGL Mitochondrial DNA mismatch repair protein mutS
            homolog OS=Sarcophyton glaucum PE=3 SV=1
          Length = 982

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 318  ICKAISKLLQKVYPTFDDKASCNVKL*RRSNLEPAYS 208
            IC A +  +  + P  + K  CN KL RRSNL P  S
Sbjct: 907  ICGAPADAVHHIKPKSEHKKLCNRKLNRRSNLVPVCS 943


>sp|Q36724|COX1_BLAGE Cytochrome c oxidase subunit 1 (Fragment)
           OS=Blattella germanica GN=COI PE=2 SV=1
          Length = 508

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 139 FFLTNWYLHNSNVQTNFPTLASDAISWFQ 225
           F    W   +SN Q  FPT  S++I WFQ
Sbjct: 463 FIFIMWESMSSNRQVLFPTQTSNSIEWFQ 491


>sp|A1W0U9|HIS51_CAMJJ Imidazole glycerol phosphate synthase subunit
           hisH 1 OS=Campylobacter jejuni subsp. jejuni serotype
           O:23/36 (strain 81-176) GN=hisH1 PE=3 SV=1
          Length = 201

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
 Frame = +1

Query: 226 VRSSS*FYITRSFIIKCRINFLK---QFGDRFTNSL------PLNFHPK 345
           + + S FY   SF +KC+  F+    Q+G +F  SL         FHP+
Sbjct: 137 INNKSDFYFVHSFYVKCKDEFVSAKAQYGHKFVASLQKDRIFATQFHPE 185

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911954|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C04.
         (512 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0CJ71|A0CJ71_PARTE Chromosome undetermined scaffold_194, who...    33   8.1  

>tr|A0CJ71|A0CJ71_PARTE Chromosome undetermined scaffold_194, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00038620001 PE=4 SV=1
          Length = 699

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 145 LTNWYLHNSNVQTNFPTLASDAISWFQVRSSS*F--YITRSFIIKCRINFLKQFGDRFTN 318
           +T++  +N N++    T A  +ISWF +R  S F  YI   +  +C+   ++ F   F+N
Sbjct: 311 ITDFIHNNENLRIEVTTSADGSISWFGIRDFSLFIDYIKEEY--QCKDFNIQPFDGCFSN 368

Query: 319 SLPLNF 336
               NF
Sbjct: 369 QYDCNF 374