BP911959
Clone id YMU001_000011_C09
Library
Length 332
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTAAAAGGATGATATCTTGCTACACATGAGAGCAGATACAAGTTTGTTGCTCAAGTGAC
AATTCAAAATTTACATATCATGATGATCAGGATCAAAGAGGTGTGGGGTACTTGTGAGGC
AATGCCAAACACTCGTTGGAATACACATTATGAGTCTTGATCTCATCGCACTTGGTGTTG
GACATGAATCCGATCAATTACATAGCTGCAATAATGTCTTGTAGCCAATGTGTGAACTAA
CTCTTGAGGTTCGAATAAGCCATTTAATATAGTTGAAACACGAAAGCTTTAATAAAAAAA
AACAATGGGGTGCTGATATCATGGTTGATGGC
■■Homology search results ■■ -
sp_hit_id A7MZS0
Definition sp|A7MZS0|MEND_VIBHB 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
Align length 48
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911959|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C09.
(332 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7MZS0|MEND_VIBHB 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cycloh... 29 6.4

>sp|A7MZS0|MEND_VIBHB
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
carboxylate synthase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=menD PE=3 SV=1
Length = 572

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1

Query: 52 SSDNSKFTYHDDQDQRGVGYL-*GNAKHSLEYTL*VLISSHLVLDMNP 192
++DN FT H D+RG+G++ G AK S E ++ S V ++ P
Sbjct: 43 AADNPNFTIHTHFDERGLGFMALGLAKASKEPVALIVTSGTAVANLLP 90


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911959|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C09.
(332 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******