BP911963
Clone id YMU001_000011_D03
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTAAAATTTCAACAAGTCCAGTAGCGCTATCGCTTTTCTACGTTGATTTGGAAAACTTA
TGACAGGAGGAAGAGCATCAACCTTTCGACACCACAGCTCTGTGCAAAGTGTCTATCAAC
ACCATCTACATGCAAGTCCTCTAATCTTCCATCGCCAAAAGAACCAACCATCCCTTCCTG
TGATAGGGAATCTTGATTACCATTACCACCTTGAGCATTCACTGCTGTCACAGAAAGAGC
CTCAACTCTCTCTCTTATTTGAGAGGCTAGATGAAAATGGCCGTTGCTCTGATTGTCAGC
TCCAACAGGCCTTAAATTGTCAGACTTCAAATGATCTACCTCTGCCTTCTTAGAAGATGT
TGAAAACCTGACTGCTTGATCTCTGTCCCCTGATGATGTAGCTGACGATTGGCCAGTTGG
AAGTAACCAGTTTGCCCAATCACCTTTCTTCCGAATTTTGTCACCCTGGACTTCTACAAC
ATTTGAT
■■Homology search results ■■ -
sp_hit_id Q8ZQD5
Definition sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimurium
Align length 67
Score (bit) 35.0
E-value 0.18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911963|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_D03.
(487 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimur... 35 0.18
sp|Q8Z814|FTSK_SALTI DNA translocase ftsK OS=Salmonella typhi GN... 35 0.18
sp|Q07873|VE4_HPV65 Probable protein E4 OS=Human papillomavirus ... 30 4.5
sp|Q7UKV4|RL9_RHOBA 50S ribosomal protein L9 OS=Rhodopirellula b... 30 4.5
sp|P97868|RBBP6_MOUSE Retinoblastoma-binding protein 6 OS=Mus mu... 30 4.5
sp|P28623|GUND_CLOCL Endoglucanase D OS=Clostridium cellulovoran... 30 4.5
sp|Q93073|K0256_HUMAN Uncharacterized protein KIAA0256 OS=Homo s... 30 5.7
sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo sap... 30 7.6
sp|Q5UPU7|YL264_MIMIV Uncharacterized WD repeat-containing prote... 29 9.9
sp|Q32KD2|SETB1_DROME Histone-lysine N-methyltransferase eggless... 29 9.9
sp|Q8CJ12|GPR64_MOUSE G-protein coupled receptor 64 OS=Mus muscu... 29 9.9
sp|Q9VGG5|CAD87_DROME Cadherin-87A OS=Drosophila melanogaster GN... 29 9.9
sp|Q9YGC1|BLNK_CHICK B-cell linker protein OS=Gallus gallus GN=B... 29 9.9
sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associat... 29 9.9

>sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimurium
GN=ftsK PE=3 SV=1
Length = 1351

Score = 35.0 bits (79), Expect = 0.18
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = -2

Query: 381 DQAVRFSTSSKKAEVDHLKSDNLRPVGADNQSNGHFHLASQIRERVEALSVTAVNAQGGN 202
DQAV F T +KA + G Q ++ A++I E++EA + V+AQG N
Sbjct: 1292 DQAVNFVTQKRKASIS----------GVQRQFRIGYNRAARIIEQMEAQGI--VSAQGHN 1339

Query: 201 GNQDSLS 181
GN++ L+
Sbjct: 1340 GNREVLA 1346


>sp|Q8Z814|FTSK_SALTI DNA translocase ftsK OS=Salmonella typhi GN=ftsK
PE=3 SV=1
Length = 1343

Score = 35.0 bits (79), Expect = 0.18
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = -2

Query: 381 DQAVRFSTSSKKAEVDHLKSDNLRPVGADNQSNGHFHLASQIRERVEALSVTAVNAQGGN 202
DQAV F T +KA + G Q ++ A++I E++EA + V+AQG N
Sbjct: 1284 DQAVNFVTQKRKASIS----------GVQRQFRIGYNRAARIIEQMEAQGI--VSAQGHN 1331

Query: 201 GNQDSLS 181
GN++ L+
Sbjct: 1332 GNREVLA 1338


>sp|Q07873|VE4_HPV65 Probable protein E4 OS=Human papillomavirus
type 65 GN=E4 PE=4 SV=1
Length = 213

Score = 30.4 bits (67), Expect = 4.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2

Query: 83 LSTPQLCAKCLSTPSTCKSSNLPSPKEPTIPSCDRES 193
L P L A+ PST +++N P P+ P PS R +
Sbjct: 84 LFPPLLSAQQTPPPSTLRNNNYPGPQHPPTPSLPRRA 120


>sp|Q7UKV4|RL9_RHOBA 50S ribosomal protein L9 OS=Rhodopirellula
baltica GN=rplI PE=3 SV=1
Length = 177

Score = 30.4 bits (67), Expect = 4.5
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Frame = -2

Query: 468 QGDKIRKKGDWA-NWLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKS-----DNLR- 310
QGD + K +A N+LLP G ++ + + + + E++ LKS D L
Sbjct: 34 QGDLVEVKAGYALNYLLPQGLATIATDHHKRMVEKHREKLRAIELEKLKSYREQADELAK 93

Query: 309 ---PVGADNQSNGHFHLASQIRERVEALSVTAVNAQGGNGNQDSLSQEGMVGSFG 154
+ A+ GH + + E V+AL + + QD + EG + G
Sbjct: 94 QSITIEANANDEGHLYGSVGPHEIVDALKASGITLA-----QDQIRLEGPLKELG 143


>sp|P97868|RBBP6_MOUSE Retinoblastoma-binding protein 6 OS=Mus
musculus GN=Rbbp6 PE=1 SV=5
Length = 1790

Score = 30.4 bits (67), Expect = 4.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = -2

Query: 474 EVQGDKIRKKGDWA------NWLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKSDNL 313
+V+ DK ++K D + N L P+ GDR+++ R KKA+ + K D++
Sbjct: 1014 KVKSDKTKRKSDGSATAKKDNVLKPSKGPQEKVDGDREKSPRSEPPLKKAKEEATKIDSV 1073

Query: 312 RP 307
+P
Sbjct: 1074 KP 1075


>sp|P28623|GUND_CLOCL Endoglucanase D OS=Clostridium cellulovorans
GN=engD PE=1 SV=1
Length = 515

Score = 30.4 bits (67), Expect = 4.5
Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2

Query: 429 WLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKSDNL---RPVGADNQSNGHFHLASQ 259
WL P + A + ++ K DHL + + RPVGA Q G + +
Sbjct: 140 WLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENRE 199

Query: 258 IRERVEALSVTAVNAQGGNGNQDSLSQEGMVGSFGDGRLEDLHVDGVD 115
+ R +V A+ A GGN + + S + DL + D
Sbjct: 200 VVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNND 247


>sp|Q93073|K0256_HUMAN Uncharacterized protein KIAA0256 OS=Homo
sapiens GN=KIAA0256 PE=2 SV=3
Length = 1101

Score = 30.0 bits (66), Expect = 5.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +3

Query: 207 HLEHSLLSQKEPQLSLL-------FERLDENGRCSDCQLQQALNCQTSNDLP 341
HL S + +P L F+ L+ENG D +QQ L+ + +DLP
Sbjct: 371 HLSSSQSHRSDPNSESLYFEDEDGFQELNENGNAKDENIQQKLSSKVLDDLP 422


>sp|P49750|YLPM1_HUMAN YLP motif-containing protein 1 OS=Homo
sapiens GN=YLPM1 PE=1 SV=3
Length = 1951

Score = 29.6 bits (65), Expect = 7.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2

Query: 89 TPQLCAKCLSTPSTCKSSNLPSPKEPTIPSCDRES*LPLPP 211
TP+ + ++ P+T + PS +EP +P + E PLPP
Sbjct: 326 TPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVPPPLPP 366


>sp|Q5UPU7|YL264_MIMIV Uncharacterized WD repeat-containing protein
L264 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L264
PE=1 SV=1
Length = 1389

Score = 29.3 bits (64), Expect = 9.9
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = -2

Query: 366 FSTSSKKAEVDHLKSDNLRPVGADNQSNGHFHLASQIRERVEALSVTAVNAQ-GGNGNQD 190
++ SS+K + +H SDN +DN S+ E+V +++ A N N N +
Sbjct: 499 YTNSSEKYQYNHYDSDNCSDNYSDNYSDND-------SEKVYNINLDATNINTDPNYNHN 551

Query: 189 SLSQEGMVGSFGDGRLEDLHVDGVDRHF 106
+ +F + R+ D D + +F
Sbjct: 552 FNNNHNFNNNFTNNRMTDYSTDYISHNF 579


>sp|Q32KD2|SETB1_DROME Histone-lysine N-methyltransferase eggless
OS=Drosophila melanogaster GN=egg PE=1 SV=1
Length = 1262

Score = 29.3 bits (64), Expect = 9.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2

Query: 432 NWLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKSDNLRPVGADNQSNGH 277
N L S+AT +G R A STS+ + V HL + + V +N+ GH
Sbjct: 736 NNALAAASSAATPAGGRTNAGGVSTSNSASAVRHLNNSTIY-VDDENRPKGH 786


tr_hit_id A5AQ68
Definition tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 143
Score (bit) 50.1
E-value 6.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911963|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_D03.
(487 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05
tr|B4FX93|B4FX93_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04
tr|A7R117|A7R117_VITVI Chromosome chr4 scaffold_333, whole genom... 47 4e-04
tr|Q940X9|Q940X9_ARATH AT5g21160/T10F18_190 (Proline-rich protei... 45 0.002
tr|Q8LMP9|Q8LMP9_ORYSJ Os03g0156500 protein OS=Oryza sativa subs... 42 0.015
tr|A2XCP4|A2XCP4_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.015
tr|Q94K80|Q94K80_ARATH Putative uncharacterized protein At4g3589... 39 0.17
tr|O65626|O65626_ARATH Putative uncharacterized protein T19K4.20... 39 0.17
tr|Q9FKX2|Q9FKX2_ARATH Genomic DNA, chromosome 5, TAC clone:K2A1... 36 0.85
tr|Q8RWR2|Q8RWR2_ARATH AT5g66100/K2A18_18 OS=Arabidopsis thalian... 36 0.85
tr|A9MHZ4|A9MHZ4_SALAR Putative uncharacterized protein OS=Salmo... 35 1.4
tr|Q5NBG8|Q5NBG8_ORYSJ La related protein-like OS=Oryza sativa s... 35 1.4
tr|Q0JNU0|Q0JNU0_ORYSJ Os01g0266000 protein (Fragment) OS=Oryza ... 35 1.4
tr|B8AC73|B8AC73_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.4
tr|A2ZRK3|A2ZRK3_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4
tr|Q5PGI3|Q5PGI3_SALPA Cell division protein, required for cell ... 35 1.9
tr|Q57R41|Q57R41_SALCH Cell division protein, required for cell ... 35 1.9
tr|B5R8H8|B5R8H8_SALG2 Cell division protein FtsK OS=Salmonella ... 35 1.9
tr|B5QYP1|B5QYP1_SALEP Cell division protein FtsK OS=Salmonella ... 35 1.9
tr|B5FQ33|B5FQ33_SALDC DNA translocase FtsK OS=Salmonella dublin... 35 1.9
tr|B5F143|B5F143_SALA4 DNA translocase FtsK OS=Salmonella agona ... 35 1.9
tr|B5BBR5|B5BBR5_SALPK Cell division protein, required for cell ... 35 1.9
tr|B4TRS2|B4TRS2_SALSV DNA translocase FtsK OS=Salmonella schwar... 35 1.9
tr|B4TD21|B4TD21_SALHS DNA translocase FtsK OS=Salmonella heidel... 35 1.9
tr|B4T125|B4T125_SALNS DNA translocase FtsK OS=Salmonella newpor... 35 1.9
tr|A9N7Y0|A9N7Y0_SALPB Putative uncharacterized protein OS=Salmo... 35 1.9
tr|B5QAG3|B5QAG3_SALVI Putative ftsk/spoiiie family protein OS=S... 35 1.9
tr|B5PYI1|B5PYI1_SALHA Putative ftsk/spoiiie family protein OS=S... 35 1.9
tr|B5PMR0|B5PMR0_SALET Putative ftsk/spoiiie family protein OS=S... 35 1.9
tr|B5NZC1|B5NZC1_SALET Putative ftsk/spoiiie family protein OS=S... 35 1.9

>tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031859 PE=4 SV=1
Length = 901

Score = 50.1 bits (118), Expect = 6e-05
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 34/143 (23%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLP---------TGQSSATSSGDR-----------DQAVR 367
S VVEVQGDK+RK+GDW W++P + QS +SS D +Q
Sbjct: 35 STVVEVQGDKLRKRGDWMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTN 94

Query: 366 FSTSSKKAEVDHLKSDNLRPVGADNQSNGHFH--------------LASQIRERVEALSV 229
+ST +A+V H+++ + R D S + L +QI++R+ S
Sbjct: 95 YSTVRSEADV-HVEAFSSRSSSGDLNSQSKPYSSEGPSQVGVSKEVLIAQIQQRIS--SG 151

Query: 228 TAVNAQGGNGNQDSLSQEGMVGS 160
N GN N + +S S
Sbjct: 152 EEANLSSGNNNNNRVSSSSSKSS 174


>tr|B4FX93|B4FX93_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 124

Score = 47.8 bits (112), Expect = 3e-04
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSS 391
SN+VEVQGDK+R++G W NWLLP SA SS
Sbjct: 28 SNIVEVQGDKLRRRGAWENWLLPKLNYSAGSS 59


>tr|A7R117|A7R117_VITVI Chromosome chr4 scaffold_333, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00011738001
PE=4 SV=1
Length = 528

Score = 47.4 bits (111), Expect = 4e-04
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKSDNL-- 313
S VVEVQGDK+RK+GDW W++P +V+FS S + D L
Sbjct: 414 STVVEVQGDKLRKRGDWMKWIMP-------------PSVQFSPLSSPQSIGSSSYDTLAA 460

Query: 312 --RPVGADNQSNGHFHLASQIRERVEALSVTA----VNAQGGNGNQDSLSQEGMVG 163
+ V Q+ + + S+ VEA S + +N+Q + + SQ G+ G
Sbjct: 461 RFQNVTLGEQTTNYSTVRSEADVHVEAFSSRSSSGDLNSQSKPYSSEGPSQVGVQG 516


>tr|Q940X9|Q940X9_ARATH AT5g21160/T10F18_190 (Proline-rich protein
family) OS=Arabidopsis thaliana GN=At5g21160 PE=2 SV=1
Length = 826

Score = 45.1 bits (105), Expect = 0.002
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSS---GDRDQAVRF---------STSSKKA 343
SN VEVQGD+IRK+ W++W+ + +S++ + GD+D S S K
Sbjct: 339 SNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKP 398

Query: 342 EVDHLKSDNLRPVGADNQSNGHFHLASQIRERVEALS 232
V S+ + +N +G+ ++ + VE LS
Sbjct: 399 TVSDFSSEGAQSSRTNNYKSGNLKSSADEKRNVEDLS 435


>tr|Q8LMP9|Q8LMP9_ORYSJ Os03g0156500 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0011L14.12 PE=4 SV=1
Length = 481

Score = 42.0 bits (97), Expect = 0.015
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLP-TGQSSATSSG 388
S VVEVQGDK+RK+ W WLLP G S+ SSG
Sbjct: 368 STVVEVQGDKLRKRERWEIWLLPKQGYSAGNSSG 401


>tr|A2XCP4|A2XCP4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10079 PE=4 SV=1
Length = 481

Score = 42.0 bits (97), Expect = 0.015
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLP-TGQSSATSSG 388
S VVEVQGDK+RK+ W WLLP G S+ SSG
Sbjct: 368 STVVEVQGDKLRKRERWEIWLLPKQGYSAGNSSG 401


>tr|Q94K80|Q94K80_ARATH Putative uncharacterized protein At4g35890
OS=Arabidopsis thaliana GN=AT4g35890 PE=2 SV=1
Length = 523

Score = 38.5 bits (88), Expect = 0.17
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = -2

Query: 477 VEVQGDKIRKKGDWANWLL---PTGQSSATSSGDRDQAV-----RFSTSSKKAEVDHLKS 322
VEVQGD IRK+ +W NW+L PTG S S DR AV S A+ S
Sbjct: 433 VEVQGDFIRKRDNWQNWVLRRNPTG--SGPQSVDRADAVAKRLGNLSVDQSSADPIGGSS 490

Query: 321 DNLRPVGA 298
L+P A
Sbjct: 491 SQLQPTEA 498


>tr|O65626|O65626_ARATH Putative uncharacterized protein T19K4.20
(Putative uncharacterized protein AT4g35890)
OS=Arabidopsis thaliana GN=T19K4.20 PE=4 SV=1
Length = 472

Score = 38.5 bits (88), Expect = 0.17
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = -2

Query: 477 VEVQGDKIRKKGDWANWLL---PTGQSSATSSGDRDQAV-----RFSTSSKKAEVDHLKS 322
VEVQGD IRK+ +W NW+L PTG S S DR AV S A+ S
Sbjct: 382 VEVQGDFIRKRDNWQNWVLRRNPTG--SGPQSVDRADAVAKRLGNLSVDQSSADPIGGSS 439

Query: 321 DNLRPVGA 298
L+P A
Sbjct: 440 SQLQPTEA 447


>tr|Q9FKX2|Q9FKX2_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18
OS=Arabidopsis thaliana PE=4 SV=1
Length = 431

Score = 36.2 bits (82), Expect = 0.85
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQS-SATSSGDRDQA 373
S VVE+QG+ +R++GDW +LLP S S ++G + A
Sbjct: 374 SEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNA 412


>tr|Q8RWR2|Q8RWR2_ARATH AT5g66100/K2A18_18 OS=Arabidopsis thaliana
GN=At5g66100 PE=2 SV=1
Length = 453

Score = 36.2 bits (82), Expect = 0.85
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2

Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQS-SATSSGDRDQA 373
S VVE+QG+ +R++GDW +LLP S S ++G + A
Sbjct: 396 SEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNA 434