BP911963 |
Clone id |
YMU001_000011_D03 |
Library |
YMU01 |
Length |
487 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000011_D03. |
Accession |
BP911963 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTAAAATTTCAACAAGTCCAGTAGCGCTATCGCTTTTCTACGTTGATTTGGAAAACTTA TGACAGGAGGAAGAGCATCAACCTTTCGACACCACAGCTCTGTGCAAAGTGTCTATCAAC ACCATCTACATGCAAGTCCTCTAATCTTCCATCGCCAAAAGAACCAACCATCCCTTCCTG TGATAGGGAATCTTGATTACCATTACCACCTTGAGCATTCACTGCTGTCACAGAAAGAGC CTCAACTCTCTCTCTTATTTGAGAGGCTAGATGAAAATGGCCGTTGCTCTGATTGTCAGC TCCAACAGGCCTTAAATTGTCAGACTTCAAATGATCTACCTCTGCCTTCTTAGAAGATGT TGAAAACCTGACTGCTTGATCTCTGTCCCCTGATGATGTAGCTGACGATTGGCCAGTTGG AAGTAACCAGTTTGCCCAATCACCTTTCTTCCGAATTTTGTCACCCTGGACTTCTACAAC ATTTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8ZQD5 |
Definition |
sp|Q8ZQD5|FTSK_SALTY DNA translocase ftsK OS=Salmonella typhimurium |
Align length |
67 |
Score (bit) |
35.0 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AQ68 |
Definition |
tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
143 |
Score (bit) |
50.1 |
E-value |
6.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911963|Adiantum capillus-veneris mRNA, clone: YMU001_000011_D03. (487 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis... 50 6e-05 tr|B4FX93|B4FX93_MAIZE Putative uncharacterized protein OS=Zea m... 48 3e-04 tr|A7R117|A7R117_VITVI Chromosome chr4 scaffold_333, whole genom... 47 4e-04 tr|Q940X9|Q940X9_ARATH AT5g21160/T10F18_190 (Proline-rich protei... 45 0.002 tr|Q8LMP9|Q8LMP9_ORYSJ Os03g0156500 protein OS=Oryza sativa subs... 42 0.015 tr|A2XCP4|A2XCP4_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.015 tr|Q94K80|Q94K80_ARATH Putative uncharacterized protein At4g3589... 39 0.17 tr|O65626|O65626_ARATH Putative uncharacterized protein T19K4.20... 39 0.17 tr|Q9FKX2|Q9FKX2_ARATH Genomic DNA, chromosome 5, TAC clone:K2A1... 36 0.85 tr|Q8RWR2|Q8RWR2_ARATH AT5g66100/K2A18_18 OS=Arabidopsis thalian... 36 0.85 tr|A9MHZ4|A9MHZ4_SALAR Putative uncharacterized protein OS=Salmo... 35 1.4 tr|Q5NBG8|Q5NBG8_ORYSJ La related protein-like OS=Oryza sativa s... 35 1.4 tr|Q0JNU0|Q0JNU0_ORYSJ Os01g0266000 protein (Fragment) OS=Oryza ... 35 1.4 tr|B8AC73|B8AC73_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.4 tr|A2ZRK3|A2ZRK3_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4 tr|Q5PGI3|Q5PGI3_SALPA Cell division protein, required for cell ... 35 1.9 tr|Q57R41|Q57R41_SALCH Cell division protein, required for cell ... 35 1.9 tr|B5R8H8|B5R8H8_SALG2 Cell division protein FtsK OS=Salmonella ... 35 1.9 tr|B5QYP1|B5QYP1_SALEP Cell division protein FtsK OS=Salmonella ... 35 1.9 tr|B5FQ33|B5FQ33_SALDC DNA translocase FtsK OS=Salmonella dublin... 35 1.9 tr|B5F143|B5F143_SALA4 DNA translocase FtsK OS=Salmonella agona ... 35 1.9 tr|B5BBR5|B5BBR5_SALPK Cell division protein, required for cell ... 35 1.9 tr|B4TRS2|B4TRS2_SALSV DNA translocase FtsK OS=Salmonella schwar... 35 1.9 tr|B4TD21|B4TD21_SALHS DNA translocase FtsK OS=Salmonella heidel... 35 1.9 tr|B4T125|B4T125_SALNS DNA translocase FtsK OS=Salmonella newpor... 35 1.9 tr|A9N7Y0|A9N7Y0_SALPB Putative uncharacterized protein OS=Salmo... 35 1.9 tr|B5QAG3|B5QAG3_SALVI Putative ftsk/spoiiie family protein OS=S... 35 1.9 tr|B5PYI1|B5PYI1_SALHA Putative ftsk/spoiiie family protein OS=S... 35 1.9 tr|B5PMR0|B5PMR0_SALET Putative ftsk/spoiiie family protein OS=S... 35 1.9 tr|B5NZC1|B5NZC1_SALET Putative ftsk/spoiiie family protein OS=S... 35 1.9
>tr|A5AQ68|A5AQ68_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031859 PE=4 SV=1 Length = 901
Score = 50.1 bits (118), Expect = 6e-05 Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 34/143 (23%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLP---------TGQSSATSSGDR-----------DQAVR 367 S VVEVQGDK+RK+GDW W++P + QS +SS D +Q Sbjct: 35 STVVEVQGDKLRKRGDWMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTN 94
Query: 366 FSTSSKKAEVDHLKSDNLRPVGADNQSNGHFH--------------LASQIRERVEALSV 229 +ST +A+V H+++ + R D S + L +QI++R+ S Sbjct: 95 YSTVRSEADV-HVEAFSSRSSSGDLNSQSKPYSSEGPSQVGVSKEVLIAQIQQRIS--SG 151
Query: 228 TAVNAQGGNGNQDSLSQEGMVGS 160 N GN N + +S S Sbjct: 152 EEANLSSGNNNNNRVSSSSSKSS 174
>tr|B4FX93|B4FX93_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 124
Score = 47.8 bits (112), Expect = 3e-04 Identities = 21/32 (65%), Positives = 25/32 (78%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSS 391 SN+VEVQGDK+R++G W NWLLP SA SS Sbjct: 28 SNIVEVQGDKLRRRGAWENWLLPKLNYSAGSS 59
>tr|A7R117|A7R117_VITVI Chromosome chr4 scaffold_333, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011738001 PE=4 SV=1 Length = 528
Score = 47.4 bits (111), Expect = 4e-04 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 8/116 (6%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSSGDRDQAVRFSTSSKKAEVDHLKSDNL-- 313 S VVEVQGDK+RK+GDW W++P +V+FS S + D L Sbjct: 414 STVVEVQGDKLRKRGDWMKWIMP-------------PSVQFSPLSSPQSIGSSSYDTLAA 460
Query: 312 --RPVGADNQSNGHFHLASQIRERVEALSVTA----VNAQGGNGNQDSLSQEGMVG 163 + V Q+ + + S+ VEA S + +N+Q + + SQ G+ G Sbjct: 461 RFQNVTLGEQTTNYSTVRSEADVHVEAFSSRSSSGDLNSQSKPYSSEGPSQVGVQG 516
>tr|Q940X9|Q940X9_ARATH AT5g21160/T10F18_190 (Proline-rich protein family) OS=Arabidopsis thaliana GN=At5g21160 PE=2 SV=1 Length = 826
Score = 45.1 bits (105), Expect = 0.002 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 12/97 (12%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQSSATSS---GDRDQAVRF---------STSSKKA 343 SN VEVQGD+IRK+ W++W+ + +S++ + GD+D S S K Sbjct: 339 SNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKP 398
Query: 342 EVDHLKSDNLRPVGADNQSNGHFHLASQIRERVEALS 232 V S+ + +N +G+ ++ + VE LS Sbjct: 399 TVSDFSSEGAQSSRTNNYKSGNLKSSADEKRNVEDLS 435
>tr|Q8LMP9|Q8LMP9_ORYSJ Os03g0156500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0011L14.12 PE=4 SV=1 Length = 481
Score = 42.0 bits (97), Expect = 0.015 Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLP-TGQSSATSSG 388 S VVEVQGDK+RK+ W WLLP G S+ SSG Sbjct: 368 STVVEVQGDKLRKRERWEIWLLPKQGYSAGNSSG 401
>tr|A2XCP4|A2XCP4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10079 PE=4 SV=1 Length = 481
Score = 42.0 bits (97), Expect = 0.015 Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLP-TGQSSATSSG 388 S VVEVQGDK+RK+ W WLLP G S+ SSG Sbjct: 368 STVVEVQGDKLRKRERWEIWLLPKQGYSAGNSSG 401
>tr|Q94K80|Q94K80_ARATH Putative uncharacterized protein At4g35890 OS=Arabidopsis thaliana GN=AT4g35890 PE=2 SV=1 Length = 523
Score = 38.5 bits (88), Expect = 0.17 Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Frame = -2
Query: 477 VEVQGDKIRKKGDWANWLL---PTGQSSATSSGDRDQAV-----RFSTSSKKAEVDHLKS 322 VEVQGD IRK+ +W NW+L PTG S S DR AV S A+ S Sbjct: 433 VEVQGDFIRKRDNWQNWVLRRNPTG--SGPQSVDRADAVAKRLGNLSVDQSSADPIGGSS 490
Query: 321 DNLRPVGA 298 L+P A Sbjct: 491 SQLQPTEA 498
>tr|O65626|O65626_ARATH Putative uncharacterized protein T19K4.20 (Putative uncharacterized protein AT4g35890) OS=Arabidopsis thaliana GN=T19K4.20 PE=4 SV=1 Length = 472
Score = 38.5 bits (88), Expect = 0.17 Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Frame = -2
Query: 477 VEVQGDKIRKKGDWANWLL---PTGQSSATSSGDRDQAV-----RFSTSSKKAEVDHLKS 322 VEVQGD IRK+ +W NW+L PTG S S DR AV S A+ S Sbjct: 382 VEVQGDFIRKRDNWQNWVLRRNPTG--SGPQSVDRADAVAKRLGNLSVDQSSADPIGGSS 439
Query: 321 DNLRPVGA 298 L+P A Sbjct: 440 SQLQPTEA 447
>tr|Q9FKX2|Q9FKX2_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18 OS=Arabidopsis thaliana PE=4 SV=1 Length = 431
Score = 36.2 bits (82), Expect = 0.85 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQS-SATSSGDRDQA 373 S VVE+QG+ +R++GDW +LLP S S ++G + A Sbjct: 374 SEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNA 412
>tr|Q8RWR2|Q8RWR2_ARATH AT5g66100/K2A18_18 OS=Arabidopsis thaliana GN=At5g66100 PE=2 SV=1 Length = 453
Score = 36.2 bits (82), Expect = 0.85 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -2
Query: 486 SNVVEVQGDKIRKKGDWANWLLPTGQS-SATSSGDRDQA 373 S VVE+QG+ +R++GDW +LLP S S ++G + A Sbjct: 396 SEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAGASNNA 434
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