BP911964 |
Clone id |
YMU001_000011_D04 |
Library |
YMU01 |
Length |
481 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000011_D04. |
Accession |
BP911964 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1429Contig1 |
Sequence |
TTGTTTGACATAAGCTATATGCAAAAGCCGATTGAAGTATAGCCATCCATCTAAACTGTG CATATACATGATACAAAGCCATCATGAGAATGACTGGATTATTCTCTCGTATAACAAATG TGGGGTCACGAATTTGTCTACTAATAAAATGGCAGACAAACAGGAAATTACAAAGGGAAA CAATATTCCCTTGTCTCCTTGACCATTGATACCATGTGGAGTGATTATTCGCCCCCTAAG AATTTAACTTATGGTAATTGCCCATCTTACAAATGATAACTATGTTCGTGGACTCGTCGA CTAAAGGATTGTGTAATCAACCTTCTGTTCCCTTGCTTTCAAAAAATTAAAAGACTCCAG CTGCTTCACATCTCCTCCATGCTCAGAATCAAGTGAAAACTTGTAGAAACTGCCATCTGT ACCTAGCACAAAAATGCTGTGGTTATCTTGTCCAAGGGCAATAACGGACTTCATCTCCTC C |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1DE24 |
Definition |
sp|A1DE24|ATG18_NEOFI Autophagy-related protein 18 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) |
Align length |
48 |
Score (bit) |
36.2 |
E-value |
0.074 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PS31 |
Definition |
tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
46 |
Score (bit) |
49.3 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP911964|Adiantum capillus-veneris mRNA, clone: YMU001_000011_D04. (468 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genom... 49 1e-04 tr|A5B8T7|A5B8T7_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|Q8LR61|Q8LR61_ORYSJ cDNA clone:001-029-C10, full insert seque... 49 2e-04 tr|B6SUF7|B6SUF7_MAIZE WD-repeat domain phosphoinositide-interac... 49 2e-04 tr|A2WYS0|A2WYS0_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|A7PTV3|A7PTV3_VITVI Chromosome chr7 scaffold_31, whole genome... 48 3e-04 tr|A5AVB9|A5AVB9_VITVI Putative uncharacterized protein OS=Vitis... 48 3e-04 tr|B4FQV7|B4FQV7_MAIZE Putative uncharacterized protein OS=Zea m... 47 5e-04 tr|A7PTV1|A7PTV1_VITVI Chromosome chr7 scaffold_31, whole genome... 47 6e-04 tr|B8LRE8|B8LRE8_PICSI Putative uncharacterized protein OS=Picea... 44 0.005 tr|Q9LZI8|Q9LZI8_ARATH Putative uncharacterized protein F26K9_20... 43 0.007 tr|Q93VB2|Q93VB2_ARATH AT3g62770/F26K9_200 OS=Arabidopsis thalia... 43 0.007 tr|Q9AS72|Q9AS72_ORYSJ P0028E10.20 protein OS=Oryza sativa subsp... 43 0.009 tr|Q5VQF8|Q5VQF8_ORYSJ cDNA clone:J023134M09, full insert sequen... 43 0.009 tr|Q0WPK3|Q0WPK3_ARATH Putative uncharacterized protein At3g5644... 43 0.009 tr|B8ADG4|B8ADG4_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.009 tr|A9NUD4|A9NUD4_PICSI Putative uncharacterized protein OS=Picea... 42 0.012 tr|Q8GYD7|Q8GYD7_ARATH Putative uncharacterized protein At2g4081... 41 0.026 tr|O22195|O22195_ARATH Putative uncharacterized protein At2g4081... 41 0.026 tr|Q8GSH9|Q8GSH9_ORYSJ Putative uncharacterized protein P0470D12... 40 0.058 tr|B8B5U1|B8B5U1_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.058 tr|A9S732|A9S732_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.058 tr|A3BN98|A3BN98_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.058 tr|Q0DKE9|Q0DKE9_ORYSJ Os05g0169200 protein OS=Oryza sativa subs... 39 0.13 tr|B8AYP2|B8AYP2_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.13 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.13 tr|A9S1N3|A9S1N3_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.17 tr|A7Q3D3|A7Q3D3_VITVI Chromosome chr13 scaffold_48, whole genom... 38 0.29 tr|A9RSV2|A9RSV2_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.38 tr|A2ZPP7|A2ZPP7_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.84
>tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022737001 PE=4 SV=1 Length = 209
Score = 49.3 bits (116), Expect = 1e-04 Identities = 20/46 (43%), Positives = 30/46 (65%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKARE 328 ++A G +++ +LG DGSFY+ D GG++ QLE +NFLK E Sbjct: 162 IVAFGHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLKPEE 207
>tr|A5B8T7|A5B8T7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044410 PE=4 SV=1 Length = 412
Score = 49.3 bits (116), Expect = 1e-04 Identities = 20/46 (43%), Positives = 30/46 (65%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKARE 328 ++A G +++ +LG DGSFY+ D GG++ QLE +NFLK E Sbjct: 365 IVAFGHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLKPEE 410
>tr|Q8LR61|Q8LR61_ORYSJ cDNA clone:001-029-C10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0423A12.30 PE=2 SV=1 Length = 457
Score = 48.5 bits (114), Expect = 2e-04 Identities = 19/43 (44%), Positives = 31/43 (72%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLK 337 ++A G + +++ V+G DGSFY+ D +GG++ QLE +NFLK Sbjct: 408 IVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLK 450
>tr|B6SUF7|B6SUF7_MAIZE WD-repeat domain phosphoinositide-interacting protein 3 OS=Zea mays PE=2 SV=1 Length = 443
Score = 48.5 bits (114), Expect = 2e-04 Identities = 19/47 (40%), Positives = 33/47 (70%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKAREQ 325 ++A G + +++ V+G DGSFY+ D +GG++ QLE ++FLK +Q Sbjct: 396 IVAFGHEKNTVSVVGMDGSFYRCQFDPVNGGEMLQLECYSFLKPSDQ 442
>tr|A2WYS0|A2WYS0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05078 PE=4 SV=1 Length = 455
Score = 48.5 bits (114), Expect = 2e-04 Identities = 19/43 (44%), Positives = 31/43 (72%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLK 337 ++A G + +++ V+G DGSFY+ D +GG++ QLE +NFLK Sbjct: 406 IVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLK 448
>tr|A7PTV3|A7PTV3_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023544001 PE=4 SV=1 Length = 439
Score = 47.8 bits (112), Expect = 3e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKARE 328 ++A G +++ +LG DGSFY+ D GG++ QLE NFLK E Sbjct: 392 IVAFGHQKNTVVILGMDGSFYRCQFDPVTGGEMTQLEYHNFLKPEE 437
>tr|A5AVB9|A5AVB9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032850 PE=4 SV=1 Length = 428
Score = 47.8 bits (112), Expect = 3e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKARE 328 ++A G +++ +LG DGSFY+ D GG++ QLE NFLK E Sbjct: 381 IVAFGHQKNTVVILGMDGSFYRCQFDPVTGGEMTQLEYHNFLKPEE 426
>tr|B4FQV7|B4FQV7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 449
Score = 47.0 bits (110), Expect = 5e-04 Identities = 18/47 (38%), Positives = 33/47 (70%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKAREQ 325 ++A G + +++ V+G DGSFY+ D +GG++ QL+ ++FLK +Q Sbjct: 402 IVAFGHEKNTVAVVGMDGSFYRCRFDPVNGGEMLQLDCYSFLKPSDQ 448
>tr|A7PTV1|A7PTV1_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023542001 PE=4 SV=1 Length = 424
Score = 46.6 bits (109), Expect = 6e-04 Identities = 19/43 (44%), Positives = 29/43 (67%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLK 337 ++A G +++ +LG DGSFY+ D+ GG++ QLE NFLK Sbjct: 377 IVAFGHQKNTVVILGMDGSFYRCQFDAVSGGEMIQLEYHNFLK 419
>tr|B8LRE8|B8LRE8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 403
Score = 43.5 bits (101), Expect = 0.005 Identities = 18/46 (39%), Positives = 31/46 (67%) Frame = -1
Query: 465 VIALGQDNHSIFVLGTDGSFYKFSLDSEHGGDVKQLESFNFLKARE 328 ++A G ++I ++G DGSFY+ + D +GG+++Q E FLK+ E Sbjct: 354 LVAFGHQKNTIVIVGLDGSFYRCAFDPVNGGEMEQKEYARFLKSDE 399
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