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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911978
Clone id YMU001_000011_E12
Library
Length 577
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGAAATGGCTGACAGGACAGGAAGTAGTGCCCTTGCATTTGTCCGAAAATCCGGTTTTTA
TGGAAATACATGAAAAAGTTATGGGAGAATTAAATACGCACTCTCCTTCTGAAACAAGAG
CTAAACTTGGCCAACCATGGGTGCGTGGCTGGGATGACAACCGTAAAGTCGGAGGCCCAC
AAGCTGGCAATCAATGAGGAAAGATATTTGCTGGTCTGGGTGCTGGACTTCATACATCCA
CTTTGATGGGGAGAGAAATTTGTGTCTCTTCGTGTCACAAACCTTTAAATTCAAGTGTGA
ATGTGGGCACTGTAGCTATGGTGGCCTTCATTGCATGGAAGCTCTTACTCATGGCAAACT
AAAATTGCTTTCAGAGATGCATAGTCCGTACGCCAGGCATAAAATGGCAGGATTAACATA
TGTAGAAAAATTACTGACTATTATTTGATGCCACAAAGATGACACCCAAACTCAAGTAGC
TTGTGCTTATAATTGGGTATGGCTCTTGTAATTATGGATATACAGAGGTCTGTTAAATCG
AATAAACCTTGCTCCTTCGCAGCGGGCAAGGGGCTTA
■■Homology search results ■■ -
sp_hit_id P73511
Definition sp|P73511|PHSG_SYNY3 Glycogen phosphorylase OS=Synechocystis sp. (strain PCC 6803)
Align length 53
Score (bit) 31.6
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911978|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_E12.
         (577 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P73511|PHSG_SYNY3 Glycogen phosphorylase OS=Synechocystis sp....    32   3.0  
sp|O93429|TRFE_PAROL Serotransferrin OS=Paralichthys olivaceus G...    30   6.6  
sp|Q9LUI8|FBK65_ARATH Putative F-box/Kelch-repeat protein At3g22...    30   6.6  
sp|P15697|FP_CRIMI Female protein OS=Cricetulus migratorius PE=2...    30   8.6  

>sp|P73511|PHSG_SYNY3 Glycogen phosphorylase OS=Synechocystis sp.
           (strain PCC 6803) GN=glgP PE=3 SV=1
          Length = 849

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
 Frame = +3

Query: 18  QEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQ--------PWVRGW 152
           Q+++ +HLS+NP     HE    ++N   PS   A+L +         W R W
Sbjct: 312 QDMIRIHLSDNPTLENFHEHFAVQMNDTHPSIAVAELMRLLVDEHHYEWQRAW 364


>sp|O93429|TRFE_PAROL Serotransferrin OS=Paralichthys olivaceus
           GN=tf PE=2 SV=1
          Length = 685

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 219 GAGLHTSTLMGREICVSSCHKPLNSSVNVGTVAMVAFIAWK 341
           G GLH   LMG++ C +   K    ++ +GT+  + FI WK
Sbjct: 113 GFGLHQ--LMGKKSCHTGVGKSAGWNIPIGTLLSMDFIKWK 151


>sp|Q9LUI8|FBK65_ARATH Putative F-box/Kelch-repeat protein At3g22730
           OS=Arabidopsis thaliana GN=At3g22730 PE=4 SV=1
          Length = 372

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
 Frame = -3

Query: 245 QSGCMKSSTQTSKYLSSLIASL------WASDFTVVIPATH---PWLAKFSSCFRRRVRI 93
           Q   +  S  TSK +   + ++      W+  FTV IP      P+L  +     ++V +
Sbjct: 253 QLSLLSQSDSTSKIMEMWVTNIIEDVLMWSKSFTVDIPIRGDYCPYLTSYLVDEEKKVAV 312

Query: 92  *FSHNFFMYFHKNRIFGQMQGHY 24
            ++ NF     K  I G+  G+Y
Sbjct: 313 CYNENFEKSNKKVYIIGEDNGYY 335


>sp|P15697|FP_CRIMI Female protein OS=Cricetulus migratorius PE=2
           SV=1
          Length = 231

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = -3

Query: 173 SDFTVVIPATHPWLAKFSSCFRRRVRI*FSHNFFMYFHKNR-----IFGQMQGHYFL 18
           SD+  +IP     L  F+ CFR    +   H+ F Y  KN+     I+ +  G Y L
Sbjct: 36  SDYVKLIPRLEKPLENFTLCFRTYTDLSRPHSLFSYNTKNKDNELLIYKERMGEYGL 92
tr_hit_id A9REL3
Definition tr|A9REL3|A9REL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 87.8
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911978|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_E12.
         (577 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9REL3|A9REL3_PHYPA Predicted protein OS=Physcomitrella paten...    88   4e-16
tr|A9NZK3|A9NZK3_PICSI Putative uncharacterized protein OS=Picea...    86   1e-15
tr|A7R0W7|A7R0W7_VITVI Chromosome chr12 scaffold_326, whole geno...    79   1e-13
tr|Q9FI44|Q9FI44_ARATH Genomic DNA, chromosome 5, TAC clone:K3K7...    79   2e-13
tr|Q2V2Z7|Q2V2Z7_ARATH Uncharacterized protein At5g51040.2 OS=Ar...    79   2e-13
tr|Q2R3B8|Q2R3B8_ORYSJ Os11g0528300 protein OS=Oryza sativa subs...    79   2e-13
tr|A2ZEW3|A2ZEW3_ORYSI Putative uncharacterized protein OS=Oryza...    79   2e-13
tr|Q8LBK3|Q8LBK3_ARATH Putative uncharacterized protein OS=Arabi...    78   3e-13
tr|B6SMW8|B6SMW8_MAIZE TPR repeat region family protein OS=Zea m...    73   1e-11
tr|B6SLM1|B6SLM1_MAIZE TPR repeat region family protein OS=Zea m...    71   4e-11
tr|A8IYH7|A8IYH7_CHLRE Predicted protein OS=Chlamydomonas reinha...    64   8e-09
tr|Q01G94|Q01G94_OSTTA [S] KOG3326 Uncharacterized conserved pro...    53   1e-05
tr|A4RRD7|A4RRD7_OSTLU Predicted protein OS=Ostreococcus lucimar...    46   0.002
tr|B7ZWW5|B7ZWW5_MAIZE Putative uncharacterized protein OS=Zea m...    37   1.0  
tr|Q01ZE2|Q01ZE2_SOLUE Sulfatase OS=Solibacter usitatus (strain ...    34   6.5  
tr|B7GAF1|B7GAF1_PHATR Predicted protein OS=Phaeodactylum tricor...    33   8.7  

>tr|A9REL3|A9REL3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112512 PE=4 SV=1
          Length = 134

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +3

Query: 6   WLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRKVGGPQA 185
           WLTGQ  VP  L+EN VF  I  ++   L+T+S  +TRA+ G+PWVRGWDDNRK+GGPQA
Sbjct: 72  WLTGQAEVPAALAENSVFAAIKGQIAENLSTYSSPQTRAQPGKPWVRGWDDNRKIGGPQA 131

Query: 186 GNQ 194
           GNQ
Sbjct: 132 GNQ 134


>tr|A9NZK3|A9NZK3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 190

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 38/64 (59%), Positives = 47/64 (73%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRKVGGPQ 182
           KWL+ QE  P  + +NPVF  +HEKV+ +LN ++  ETRA  GQPWVRGWDD R +GGP 
Sbjct: 127 KWLSAQEPAPEAVFKNPVFSALHEKVLKKLNAYASPETRAAPGQPWVRGWDDKRGLGGPI 186

Query: 183 AGNQ 194
           AGNQ
Sbjct: 187 AGNQ 190


>tr|A7R0W7|A7R0W7_VITVI Chromosome chr12 scaffold_326, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00011656001
           PE=4 SV=1
          Length = 162

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRK-VGGP 179
           KWLTGQE  P  +S NPVF  + EKVM  LN+HS  ETRA  G+PWVRGWDD +K    P
Sbjct: 98  KWLTGQEQPPEAVSINPVFCAVREKVMNNLNSHSAPETRAMPGKPWVRGWDDIKKGRDSP 157

Query: 180 QAGNQ 194
            +GNQ
Sbjct: 158 VSGNQ 162


>tr|Q9FI44|Q9FI44_ARATH Genomic DNA, chromosome 5, TAC clone:K3K7
           (Putative uncharacterized protein At5g51040) (At5g51040)
           OS=Arabidopsis thaliana GN=At5g51040 PE=2 SV=1
          Length = 188

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDD-NRKVGGP 179
           KWLT QE  P  +S NPVF  +HEKVM  LN H+  ETRA  GQPWVRGWDD  R    P
Sbjct: 124 KWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGRDAP 183

Query: 180 QAGNQ 194
            +GNQ
Sbjct: 184 ISGNQ 188


>tr|Q2V2Z7|Q2V2Z7_ARATH Uncharacterized protein At5g51040.2
           OS=Arabidopsis thaliana GN=At5g51040 PE=4 SV=1
          Length = 184

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDD-NRKVGGP 179
           KWLT QE  P  +S NPVF  +HEKVM  LN H+  ETRA  GQPWVRGWDD  R    P
Sbjct: 120 KWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGRDAP 179

Query: 180 QAGNQ 194
            +GNQ
Sbjct: 180 ISGNQ 184


>tr|Q2R3B8|Q2R3B8_ORYSJ Os11g0528300 protein OS=Oryza sativa subsp.
           japonica GN=Os11g0528300 PE=4 SV=1
          Length = 186

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 35/64 (54%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRKVGGPQ 182
           KWLT QE  P  ++ NPVF+ +  KV   L+ HS  ETR+  GQPWVRGWDD R + GP+
Sbjct: 123 KWLTSQEQPPEAVNSNPVFIAVKSKVTDNLSKHSSPETRSAPGQPWVRGWDDKRGIEGPK 182

Query: 183 AGNQ 194
            GNQ
Sbjct: 183 YGNQ 186


>tr|A2ZEW3|A2ZEW3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_36329 PE=4 SV=1
          Length = 186

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 35/64 (54%), Positives = 43/64 (67%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRKVGGPQ 182
           KWLT QE  P  ++ NPVF+ +  KV   L+ HS  ETR+  GQPWVRGWDD R + GP+
Sbjct: 123 KWLTDQEQPPEAMNSNPVFIAVKSKVTENLSKHSSPETRSAPGQPWVRGWDDKRGIEGPK 182

Query: 183 AGNQ 194
            GNQ
Sbjct: 183 YGNQ 186


>tr|Q8LBK3|Q8LBK3_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 188

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDD-NRKVGGP 179
           KWLT QE  P  +S NPVF  +HEKVM  LN H+  ETRA  GQPWVRGWDD  R    P
Sbjct: 124 KWLTEQEQPPEAVSSNPVFSALHEKVMKNLNKHAAPETRAAAGQPWVRGWDDFKRGRDTP 183

Query: 180 QAGNQ 194
            +GNQ
Sbjct: 184 ISGNQ 188


>tr|B6SMW8|B6SMW8_MAIZE TPR repeat region family protein OS=Zea mays
           PE=2 SV=1
          Length = 180

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRK-VGGP 179
           KWLT QE  P  L+ NPVF  I  KV   L  H+  ETR+  GQPWVRGWDD +K   GP
Sbjct: 116 KWLTSQEQPPEDLNSNPVFAAIKSKVTDNLTKHASPETRSTPGQPWVRGWDDIKKGKDGP 175

Query: 180 QAGNQ 194
           + GNQ
Sbjct: 176 KYGNQ 180


>tr|B6SLM1|B6SLM1_MAIZE TPR repeat region family protein OS=Zea mays
           PE=2 SV=1
          Length = 175

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   KWLTGQEVVPLHLSENPVFMEIHEKVMGELNTHSPSETRAKLGQPWVRGWDDNRK-VGGP 179
           KWLT QE  P  L+ NPVF  I  KV   L  H+  ETR+  GQPWVRGWDD +K   GP
Sbjct: 111 KWLTSQEQPPEDLNSNPVFSAIKSKVTDNLIKHASPETRSTPGQPWVRGWDDIKKGKDGP 170

Query: 180 QAGNQ 194
             GNQ
Sbjct: 171 SYGNQ 175