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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP911979
Clone id YMU001_000011_F02
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCGTGAGCATCGCACACCAATGGTTTGGTTGCATTTGGGTCGACATGTCTACAAGATTCG
ACATGTTACAATTTCAGAGAAATTACGCACTACTCTCAGAGTCGAGCTAGGAGCGATCCC
TTGACGAACAAAGCACATGGATTGCATGTTTTCAAAGTATTGAGGAGGCATATTTAGTGT
CAAGGTGGTCGGAGGCTCGGAACAATCAGATGTTAAAGAGGGATAGATGGAGTACGTTTC
AGAGGTAGTTGAGTGAGGCTGTGTCGACTTGTTCCAGAGTGTTAAGGAGGCATATTTAGT
GTCAATATGTTTGGACGTTCAAGATGTTGTTTGTGTCCACTTTGGAGGCCATTCAAGGAT
TGGAATTTTTGGCTATAAGATCAGACGGTGATGGAAAAATGCAGCGAATTTCGTAAAAAA
TGTGCATTCCTTTCATAGTCGAGCGAGGAGTGATTTTCTTGGTGAACGAAACACATGGAT
TACATCTTT
■■Homology search results ■■ -
sp_hit_id Q3YRX7
Definition sp|Q3YRX7|MRAW_EHRCJ S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Ehrlichia canis (strain Jake)
Align length 45
Score (bit) 30.8
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911979|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_F02.
         (489 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3YRX7|MRAW_EHRCJ S-adenosyl-L-methionine-dependent methyltra...    31   3.4  

>sp|Q3YRX7|MRAW_EHRCJ S-adenosyl-L-methionine-dependent
           methyltransferase mraW OS=Ehrlichia canis (strain Jake)
           GN=mraW PE=3 SV=1
          Length = 297

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 476 MCFVHQENHSSLDYERNAHFLRNSLHFSITV*SYSQKFQSLNGLQ 342
           +C + Q+ H+S+ YE  A+   N +HF I    +SQ  Q L G Q
Sbjct: 44  VCAIDQDKHTSIFYEELANNFPNRIHFFIN--KFSQIKQVLLGAQ 86
tr_hit_id Q6VAV9
Definition tr|Q6VAV9|Q6VAV9_ANOGA ICHIT (Fragment) OS=Anopheles gambiae
Align length 71
Score (bit) 38.9
E-value 0.13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911979|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_F02.
         (489 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6VAV9|Q6VAV9_ANOGA ICHIT (Fragment) OS=Anopheles gambiae GN=...    39   0.13 
tr|B2WA60|B2WA60_PYRTR Predicted protein OS=Pyrenophora tritici-...    38   0.29 
tr|Q6FVF0|Q6FVF0_CANGA Strain CBS138 chromosome A complete seque...    37   0.49 
tr|Q967D0|Q967D0_GEOCY Mucus-like protein OS=Geodia cydonium GN=...    36   1.1  
tr|A9SFH9|A9SFH9_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.5  
tr|Q8IJH8|Q8IJH8_PLAF7 Putative uncharacterized protein OS=Plasm...    34   3.2  
tr|B6N927|B6N927_BRAFL Putative uncharacterized protein OS=Branc...    34   4.2  
tr|Q1BEW9|Q1BEW9_MYCSS Conserved hypothetical proline and threon...    33   5.5  
tr|A3PTL6|A3PTL6_MYCSJ Conserved hypothetical proline and threon...    33   5.5  
tr|A1UA12|A1UA12_MYCSK Conserved hypothetical proline and threon...    33   5.5  
tr|Q29BR6|Q29BR6_DROPS GA14233 OS=Drosophila pseudoobscura pseud...    33   7.1  
tr|A7S951|A7S951_NEMVE Predicted protein OS=Nematostella vectens...    33   7.1  
tr|A4CC52|A4CC52_9GAMM Putative metalloproteinase OS=Pseudoalter...    33   7.2  
tr|Q7YTR7|Q7YTR7_CAEEL Putative uncharacterized protein clec-200...    33   9.3  
tr|B8PBW9|B8PBW9_9APHY Predicted protein OS=Postia placenta Mad-...    33   9.3  

>tr|Q6VAV9|Q6VAV9_ANOGA ICHIT (Fragment) OS=Anopheles gambiae
           GN=ICHIT PE=4 SV=1
          Length = 334

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 372 PKIPILEWPPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEP 193
           P+ P       WT  T+ T+ H  T   + T W+    P  TT+ T  I P+ T+    P
Sbjct: 178 PRPPTTTTTTVWTDPTATTTTHAPT---TTTTWSDLPPPPPTTTTTVWIDPTATTTTHVP 234

Query: 192 PTTLT-LNMPP 163
           PTT T  ++PP
Sbjct: 235 PTTTTWSDLPP 245


>tr|B2WA60|B2WA60_PYRTR Predicted protein OS=Pyrenophora
           tritici-repentis (strain Pt-1C-BFP) GN=PTRG_07173 PE=4
           SV=1
          Length = 410

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -1

Query: 363 PILEWPPKWTQTTS*TSKHIDTKYASLTL--WNKSTQPHSTTSETYSIYPSLTSDCSEPP 190
           P     P WTQ+ S T +      A L    W  +    +T SE  ++YPS ++  S PP
Sbjct: 239 PTTPTSPPWTQSRSSTRRSSLANVALLQTQPWPHARNDSATLSEMSTLYPSASAGASSPP 298

Query: 189 TTLTLNMPPQ 160
           T+  +  P Q
Sbjct: 299 TSCRVGYPLQ 308


>tr|Q6FVF0|Q6FVF0_CANGA Strain CBS138 chromosome A complete sequence
           OS=Candida glabrata GN=CAGL0E02409g PE=4 SV=1
          Length = 357

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
 Frame = -1

Query: 336 TQTTS*TSKHIDTKYASL--------TLWNKSTQPHSTTSETYSIYPSLTSDCSEPPTTL 181
           T +TS  S+  +T+ +S         +++++S    STTS+T S   S TS  S  P+T 
Sbjct: 59  TSSTSDNSESSETEGSSTEITSTSESSIYSESVTASSTTSDTDSETSSTTSYTSYTPSTT 118

Query: 180 TLNMPPQYFENMQSMCFVRQGIAPSSTL 97
           ++++ P Y  + Q+  +V     PS T+
Sbjct: 119 SVSVGPIYIPSAQNNKYVYHATHPSGTV 146


>tr|Q967D0|Q967D0_GEOCY Mucus-like protein OS=Geodia cydonium
           GN=mucl PE=2 SV=1
          Length = 538

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/76 (31%), Positives = 35/76 (46%)
 Frame = -1

Query: 348 PPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEPPTTLTLNM 169
           PP  T TT   +    T+  + T    +TQP +TTS T    P  T+  ++PPTT     
Sbjct: 69  PPTTTATTQPPTTTATTQPPTTTA---TTQPPTTTSTTQ---PPTTTSTTQPPTTTATTQ 122

Query: 168 PPQYFENMQSMCFVRQ 121
           PP      Q +  ++Q
Sbjct: 123 PPTTTSTTQHLPLLQQ 138


>tr|A9SFH9|A9SFH9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_164620 PE=4 SV=1
          Length = 231

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +2

Query: 242 EVVE*GCVDLFQSVKEAYLVSICLDVQDVVCVHFGGHSRIGIF 370
           E  E GC +    VKE  +VS+C+ + ++  +H G  +R+ IF
Sbjct: 11  ESCELGCKEETDKVKEEIIVSLCVQILEIETIHLGEDNRLLIF 53


>tr|Q8IJH8|Q8IJH8_PLAF7 Putative uncharacterized protein
           OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0220 PE=4
           SV=1
          Length = 275

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +1

Query: 307 MFGRSRCC----LCPL-WRPFKDWNFWL*DQTVMEKCSEFRKKCAFL 432
           M+    CC    LCP  W PFK  NF+L D    EK +  RK+  FL
Sbjct: 188 MYMDDTCCQMSILCPCPWGPFKYSNFFLRDANSKEKIAHLRKEVPFL 234


>tr|B6N927|B6N927_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_92247 PE=4 SV=1
          Length = 1485

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = -1

Query: 372  PKIPILEWPPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEP 193
            P   I   PP    TT   +  I T+ A+  L   +T+P +T S T    P  T+  +EP
Sbjct: 982  PTTVITTEPPTTVSTTEPFTTAITTEPATTVL---TTEPPTTLSTTE---PPTTASTTEP 1035

Query: 192  PTTLTLNMPP 163
            PTT+    PP
Sbjct: 1036 PTTILSTEPP 1045


>tr|Q1BEW9|Q1BEW9_MYCSS Conserved hypothetical proline and threonine
           rich protein OS=Mycobacterium sp. (strain MCS)
           GN=Mmcs_0444 PE=4 SV=1
          Length = 601

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 348 PPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEPPTTLTLNM 169
           PP  TQ T+ T++   T   +      +TQP +TT+   +  P  T   ++PP T T   
Sbjct: 523 PPTTTQQTTTTTQPTTTTTTTTQQTTTTTQPTTTTTRPTTTQPPTT---TQPPPTTTAAP 579

Query: 168 PP 163
           PP
Sbjct: 580 PP 581


>tr|A3PTL6|A3PTL6_MYCSJ Conserved hypothetical proline and threonine
           rich protein OS=Mycobacterium sp. (strain JLS)
           GN=Mjls_0431 PE=4 SV=1
          Length = 601

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 348 PPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEPPTTLTLNM 169
           PP  TQ T+ T++   T   +      +TQP +TT+   +  P  T   ++PP T T   
Sbjct: 523 PPTTTQQTTTTTQPTTTTTTTTQQTTTTTQPTTTTTRPTTTQPPTT---TQPPPTTTAAP 579

Query: 168 PP 163
           PP
Sbjct: 580 PP 581


>tr|A1UA12|A1UA12_MYCSK Conserved hypothetical proline and threonine
           rich protein OS=Mycobacterium sp. (strain KMS)
           GN=Mkms_0454 PE=4 SV=1
          Length = 601

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = -1

Query: 348 PPKWTQTTS*TSKHIDTKYASLTLWNKSTQPHSTTSETYSIYPSLTSDCSEPPTTLTLNM 169
           PP  TQ T+ T++   T   +      +TQP +TT+   +  P  T   ++PP T T   
Sbjct: 523 PPTTTQQTTTTTQPTTTTTTTTQQTTTTTQPTTTTTRPTTTQPPTT---TQPPPTTTAAP 579

Query: 168 PP 163
           PP
Sbjct: 580 PP 581