BP911996
Clone id YMU001_000011_G10
Library
Length 226
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTACAGAATGCGAGCTGCAGCTCTTCTCCATACCGTCCTTGTACAAAGAACCACGTAGAT
TGTGACTATTCTCTGACGTTAAAGCCTCTTTCCCAATGAGATTAAGTCGTAGTGCCTTCT
CTGATGGGGAGGAATCTTTGCTGTTGGTAAGGCGTAGTTGCAATTCATGTGCACCACTGT
CACCGCTACTCCTCTCCAATTTCAAAGACTCGTCGGAGGGATGATA
■■Homology search results ■■ -
sp_hit_id Q0CDT1
Definition sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergillus terreus (strain NIH 2624)
Align length 30
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911996|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_G10.
(226 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergil... 30 2.9
sp|Q9LSW2|ARP9_ARATH Actin-related protein 9 OS=Arabidopsis thal... 30 2.9

>sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergillus
terreus (strain NIH 2624) GN=dbp5 PE=3 SV=1
Length = 487

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2

Query: 195 RGVAVTVVHMNCNYALPTAKIPPHQRRHYD 106
RG+ V+ V M NY +P +PP+Q R D
Sbjct: 384 RGIDVSTVSMVINYDIPELHLPPNQPRQAD 413


>sp|Q9LSW2|ARP9_ARATH Actin-related protein 9 OS=Arabidopsis
thaliana GN=ARP9 PE=2 SV=1
Length = 596

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -1

Query: 184 GDSGAHELQLRLTNSKDSSPSEKALRLNLIGKEAL 80
GD+ A E +T+SKD+S S++ R + G+EAL
Sbjct: 159 GDASASEAVPDVTDSKDTSESKRKYRKMIFGEEAL 193


tr_hit_id A1SZ03
Definition tr|A1SZ03|A1SZ03_PSYIN Cytochrome c-type biogenesis protein CcmI OS=Psychromonas ingrahamii (strain 37)
Align length 41
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911996|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_G10.
(226 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1SZ03|A1SZ03_PSYIN Cytochrome c-type biogenesis protein CcmI... 37 0.64

>tr|A1SZ03|A1SZ03_PSYIN Cytochrome c-type biogenesis protein CcmI
OS=Psychromonas ingrahamii (strain 37) GN=Ping_3016 PE=4
SV=1
Length = 428

Score = 36.6 bits (83), Expect = 0.64
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -1

Query: 166 ELQLRLTNSKDSSPSEKALRLNLIGKEALTSENSHNLRGSL 44
+LQ +L N +DSSPSE+ LR ++G S+NS+N G L
Sbjct: 131 DLQNKLFNDQDSSPSEQELRDLMLGLRTQLSQNSNNADGWL 171