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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912004
Clone id YMU001_000011_H08
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGTGACACCAGCTTTCTTTTCAGGAAGTACGACACCTGCAAAGCAGGACAAATGTAAGGA
AGGCTTTGCACTGTCAGCACAACGAATATAGGGAAGGCTTTGCATTGTCAGAAAAGGCCT
GTGCTGGGTTTCTTGTGTGATGGTTGGATATGCCACCCATGGGCTTTCAACACAGGGGAT
GCTGCCAAGGATAAAGTTTTGTTTACAGGATGTAGACTAATCAGCTCTCTTTATTCTTGG
CAACTGTGCTTCTCCCCTTGTTTGTACTGTGTATACAATGTCATTTATTGTATTAATTTT
GCAAATAAATCTCTTTCCCTTCAGGTGTATTCGCCATTCT
■■Homology search results ■■ -
sp_hit_id Q5UPB0
Definition sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeba polyphaga mimivirus
Align length 33
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912004|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_H08.
         (340 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeb...    30   4.9  

>sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_R34 PE=3 SV=1
          Length = 409

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 18  FQEVRHLQSRTNVRKALHCQHNEYREGFALSEK 116
           FQE+   Q    V+K L  +HN+ + GF L++K
Sbjct: 239 FQELLESQENVKVKKDLITKHNKLKLGFTLNDK 271
tr_hit_id A6QVT8
Definition tr|A6QVT8|A6QVT8_AJECN Putative uncharacterized protein OS=Ajellomyces capsulata (strain NAm1 / WU24)
Align length 64
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912004|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_H08.
         (340 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6QVT8|A6QVT8_AJECN Putative uncharacterized protein OS=Ajell...    35   2.4  
tr|A1CIC2|A1CIC2_ASPCL Iron-sulfur cluster assembly associated p...    34   4.2  
tr|Q7CFR4|Q7CFR4_YERPE Putative phage integrase OS=Yersinia pest...    33   7.1  
tr|Q1CDC3|Q1CDC3_YERPN Phage integrase OS=Yersinia pestis bv. An...    33   7.1  
tr|Q1C0D8|Q1C0D8_YERPA Putative phage integrase OS=Yersinia pest...    33   7.1  
tr|A9R5P7|A9R5P7_YERPG Site-specific recombinase, phage integras...    33   7.1  
tr|A4TS58|A4TS58_YERPP Phage integrase OS=Yersinia pestis (strai...    33   7.1  
tr|B8D232|B8D232_9FIRM Radical SAM domain protein OS=Halothermot...    33   7.1  
tr|B0HTR5|B0HTR5_YERPE Integrase OS=Yersinia pestis biovar Antiq...    33   7.1  
tr|B0HK31|B0HK31_YERPE Integrase OS=Yersinia pestis biovar Antiq...    33   7.1  
tr|B0H7S0|B0H7S0_YERPE Integrase OS=Yersinia pestis biovar Media...    33   7.1  
tr|B0GU27|B0GU27_YERPE Integrase OS=Yersinia pestis biovar Orien...    33   7.1  
tr|B0GJW6|B0GJW6_YERPE Integrase OS=Yersinia pestis biovar Antiq...    33   7.1  
tr|B0A1N3|B0A1N3_YERPE Integrase OS=Yersinia pestis biovar Orien...    33   7.1  
tr|A9Z611|A9Z611_YERPE Integrase OS=Yersinia pestis biovar Orien...    33   7.1  
tr|A6BWL1|A6BWL1_YERPE Putative phage integrase OS=Yersinia pest...    33   7.1  
tr|B2VY25|B2VY25_PYRTR Predicted protein OS=Pyrenophora tritici-...    33   9.3  

>tr|A6QVT8|A6QVT8_AJECN Putative uncharacterized protein
           OS=Ajellomyces capsulata (strain NAm1 / WU24)
           GN=HCAG_01495 PE=4 SV=1
          Length = 630

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 14/64 (21%)
 Frame = +1

Query: 112 KRPVLGFLCDGWIC-----HPWAFNTGDAAKDKVLFTGCRL---------ISSLYSWQLC 249
           KRPVL   C GWIC     HP         K     TG  L         ISS   W L 
Sbjct: 219 KRPVLSSACPGWICYAEKTHPHVLPHISRLKSPQALTGTLLKTVLSKALNISSAQIWHLA 278

Query: 250 FSPC 261
             PC
Sbjct: 279 IMPC 282


>tr|A1CIC2|A1CIC2_ASPCL Iron-sulfur cluster assembly associated
           protein Nar1, putative OS=Aspergillus clavatus
           GN=ACLA_050990 PE=4 SV=1
          Length = 597

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 14/76 (18%)
 Frame = +1

Query: 76  STTNIGKALHCQKRPVLGFLCDGWIC-----HPWAFNTGDAAKDKVLFTGCRL------- 219
           S T+I       KRP+L   C GWIC     HP+        K     TG  L       
Sbjct: 189 SLTSIDPLNTLPKRPILSSACPGWICYAEKTHPFILPHLSRLKSPQALTGTLLKSVLSKA 248

Query: 220 --ISSLYSWQLCFSPC 261
             IS    W L   PC
Sbjct: 249 LGISPTRIWHLAIMPC 264


>tr|Q7CFR4|Q7CFR4_YERPE Putative phage integrase OS=Yersinia pestis
           GN=xerC4 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|Q1CDC3|Q1CDC3_YERPN Phage integrase OS=Yersinia pestis bv.
           Antiqua (strain Nepal516) GN=YPN_3680 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|Q1C0D8|Q1C0D8_YERPA Putative phage integrase OS=Yersinia pestis
           bv. Antiqua (strain Antiqua) GN=YPA_4123 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|A9R5P7|A9R5P7_YERPG Site-specific recombinase, phage integrase
           family OS=Yersinia pestis bv. Antiqua (strain Angola)
           GN=YpAngola_A4153 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|A4TS58|A4TS58_YERPP Phage integrase OS=Yersinia pestis (strain
           Pestoides F) GN=YPDSF_3775 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|B8D232|B8D232_9FIRM Radical SAM domain protein
           OS=Halothermothrix orenii H 168 GN=Hore_05010 PE=4 SV=1
          Length = 415

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +1

Query: 124 LGFLCDGWICHPWAFNTGDAAKDKVLFTGCRLISSLYSWQLCFSPCLYCVYNVIYCINFA 303
           +G    G ICH W+ +    +  K+LFT                   YC+Y+  YCIN  
Sbjct: 34  MGNTASGGICHSWSDDGRCISLLKILFTN------------------YCIYDCAYCINRI 75

Query: 304 NKSLSLQVYSP 336
           +  +    ++P
Sbjct: 76  SNDIPRASFTP 86


>tr|B0HTR5|B0HTR5_YERPE Integrase OS=Yersinia pestis biovar Antiqua
           str. E1979001 GN=YpE1979001_3745 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214


>tr|B0HK31|B0HK31_YERPE Integrase OS=Yersinia pestis biovar Antiqua
           str. B42003004 GN=YpB42003004_3879 PE=4 SV=1
          Length = 397

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = -2

Query: 318 GKRFICKINTIN--DIVYTVQTRGEAQLPRIKRAD*STSCKQNFILGSIPCVESPWVAYP 145
           GKR I +I  +   D++  ++ RG  +  R  R       +   I G      +P +A  
Sbjct: 136 GKRPIAEITPLELLDVLQRIEKRGALEKTRKVRQRCGEVFRYAIITGRAEYNPAPDLASA 195

Query: 144 TITQETQHRPFLTMQSLPY 88
             T + QH PFL+ + +PY
Sbjct: 196 LSTPKKQHYPFLSAEEMPY 214