BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912005|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_H09.
         (295 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2      30   3.8  
sp|A6PWY4|WDR76_MOUSE WD repeat-containing protein 76 OS=Mus mus...    29   6.5  
sp|Q8N7S6|CC071_HUMAN Uncharacterized protein C3orf71 OS=Homo sa...    29   6.5  

>sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2
          Length = 22152

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -1

Query: 145  PYIYNGPLVVSSSPDLFQTLS*TWSLVCHTPLQKEVHY*DSAEPKKG 5
            P  Y+G   +SSSP+L    +  W++   T    ++HY   AE   G
Sbjct: 1361 PAAYSGSPKISSSPNLTSPATKAWTITDTTEHSTQLHYTKLAEKSSG 1407


>sp|A6PWY4|WDR76_MOUSE WD repeat-containing protein 76 OS=Mus
           musculus GN=Wdr76 PE=2 SV=1
          Length = 622

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = -1

Query: 193 LPAVPHEPTLVLRNSGPYIYNGPLVV-----SSSPDLFQTLS*TWSLVCHTPLQK 44
           LPA P +PTLV     P +  GPL +       S +L +    TW+ +  T  +K
Sbjct: 228 LPASPTQPTLVEEEENPLLPPGPLEMIPENQDDSSELLKASLKTWAEMSQTSNEK 282


>sp|Q8N7S6|CC071_HUMAN Uncharacterized protein C3orf71 OS=Homo
           sapiens GN=C3orf71 PE=2 SV=1
          Length = 290

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 130 HCRYMGLSYGEPMLVHEEQQGGVGKAVNSLRGA 228
           HC Y G+ +GE +L   EQ   V + ++  RGA
Sbjct: 183 HCLYSGIGHGEDILASVEQITIVSRPLSGQRGA 215

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912005|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_H09.
         (295 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2GCS6|Q2GCS6_NEOSM Riboflavin synthase, alpha subunit OS=Neo...    35   1.9  
tr|Q9ZLH9|Q9ZLH9_HELPJ Putative Outer membrane protein OS=Helico...    34   3.2  

>tr|Q2GCS6|Q2GCS6_NEOSM Riboflavin synthase, alpha subunit
           OS=Neorickettsia sennetsu (strain Miyayama) GN=ribE-2
           PE=4 SV=1
          Length = 200

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 246 SSLACNGTSQAVDCFTNTSLLFLMNQHWFSVTQAH 142
           SS+ACNG    V   TNT L F ++Q  FS T  H
Sbjct: 39  SSIACNGVCLTVTSITNTELEFYVSQETFSRTNFH 73


>tr|Q9ZLH9|Q9ZLH9_HELPJ Putative Outer membrane protein
           OS=Helicobacter pylori J99 GN=jhp_0600 PE=4 SV=1
          Length = 906

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +1

Query: 34  NELPSEEEYGKPRTRSSLGSETNQVNLKPQVVHCR---YMGLSYGEPMLVHEEQQGGVGK 204
           N+L S +E  K   ++   +ET+Q N  P+ +  +   Y+GLSY   ML +E  +  VG 
Sbjct: 29  NDLASPKETPKEAQKNEAQNETSQSNQTPKEMKVKSISYVGLSYMSDMLANEIAKIRVGD 88

Query: 205 AVNS 216
            V+S
Sbjct: 89  MVDS 92