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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912030
Clone id YMU001_000012_C03
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTAGAGTGAACCAGTTTCCATGTTAACTACCGAATCCCAAATTTCTTTTG
TGCGCAGAGAGTTCATGGAGTGAAGTTGTGAACCACAGTTCTAATGTTGCCAACTTCTCA
AGCACTCTAGATGGAGCACACTAAACTCCTAAGAATACACTTTGCATCCATTTTTGTACC
ATGCAGATAATGTACTACATCGACACAAACACTTGACAAAATTGAAATCTTCTGAGCACT
CTTGCTTTTGACCTATCTATAGACAGTTTCTACCCTGTCAAATCATTTCTTCCAGAACAT
GGTTGCAACCAGAAAGTACCCATACGAATTTGTGACTACAAACAAAGATTCATCGTCGAC
TCTTCTTACGCCTGGCAATAAAAATTCCTGTTTGCTACTGCAGGATTCTTGTGTAAAAGT
GTAATGCCTTGCCTCATTAATCACCATGAATCGTGTAACGCTCCCATTTCTTTGTAGGGT
CATAAATCTCCCATCTGGATGCTGGAAAGATATGTTTGTTCTTCT
■■Homology search results ■■ -
sp_hit_id Q9WTJ8
Definition sp|Q9WTJ8|FA50B_MOUSE Protein FAM50B OS=Mus musculus
Align length 25
Score (bit) 54.7
E-value 2.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912030|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_C03.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WTJ8|FA50B_MOUSE Protein FAM50B OS=Mus musculus GN=Fam50b P...    55   2e-07
sp|Q4R846|FA50B_MACFA Protein FAM50B OS=Macaca fascicularis GN=F...    54   3e-07
sp|Q9Y247|FA50B_HUMAN Protein FAM50B OS=Homo sapiens GN=FAM50B P...    54   3e-07
sp|Q28BK4|FA50A_XENTR Protein FAM50A OS=Xenopus tropicalis GN=fa...    54   6e-07
sp|Q9WV03|FA50A_MOUSE Protein FAM50A OS=Mus musculus GN=Fam50a P...    54   6e-07
sp|Q14320|FA50A_HUMAN Protein FAM50A OS=Homo sapiens GN=FAM50A P...    54   6e-07
sp|Q568K9|FA50A_DANRE Protein FAM50A OS=Danio rerio GN=fam50a PE...    54   6e-07
sp|Q4KLV7|F50AB_XENLA Protein FAM50A B OS=Xenopus laevis GN=fam5...    54   6e-07
sp|Q2VPH1|F50AA_XENLA Protein FAM50A A OS=Xenopus laevis GN=fam5...    54   6e-07
sp|Q299F9|FAM50_DROPS Protein FAM50 homolog OS=Drosophila pseudo...    49   1e-05
sp|Q9VAY7|FAM50_DROME Protein FAM50 homolog OS=Drosophila melano...    49   1e-05
sp|Q7PYQ5|FAM50_ANOGA Protein FAM50 homolog OS=Anopheles gambiae...    49   2e-05
sp|Q16U25|FAM50_AEDAE Protein FAM50 homolog OS=Aedes aegypti GN=...    49   2e-05
sp|Q18691|FAM50_CAEEL Protein FAM50 homolog OS=Caenorhabditis el...    38   0.024
sp|A8WXX7|FAM50_CAEBR Protein FAM50 homolog OS=Caenorhabditis br...    38   0.024
sp|Q54S94|FAM50_DICDI Protein FAM50 homolog OS=Dictyostelium dis...    30   6.5  

>sp|Q9WTJ8|FA50B_MOUSE Protein FAM50B OS=Mus musculus GN=Fam50b PE=2
           SV=1
          Length = 334

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW+RYTI
Sbjct: 309 KNKHIFPASRWEPYDPEKKWDRYTI 333


>sp|Q4R846|FA50B_MACFA Protein FAM50B OS=Macaca fascicularis
           GN=FAM50B PE=2 SV=1
          Length = 325

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 300 KNKHIFPASRWEAYDPEKKWDKYTI 324


>sp|Q9Y247|FA50B_HUMAN Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2
           SV=1
          Length = 325

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 300 KNKHIFPASRWEAYDPEKKWDKYTI 324


>sp|Q28BK4|FA50A_XENTR Protein FAM50A OS=Xenopus tropicalis
           GN=fam50a PE=2 SV=1
          Length = 349

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 324 KNKHIFPASRWEPYDPEKKWDKYTI 348


>sp|Q9WV03|FA50A_MOUSE Protein FAM50A OS=Mus musculus GN=Fam50a PE=2
           SV=1
          Length = 339

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 314 KNKHIFPASRWEPYDPEKKWDKYTI 338


>sp|Q14320|FA50A_HUMAN Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1
           SV=2
          Length = 339

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 314 KNKHIFPASRWEPYDPEKKWDKYTI 338


>sp|Q568K9|FA50A_DANRE Protein FAM50A OS=Danio rerio GN=fam50a PE=2
           SV=1
          Length = 341

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 316 KNKHIFPASRWEPYDPEKKWDKYTI 340


>sp|Q4KLV7|F50AB_XENLA Protein FAM50A B OS=Xenopus laevis GN=fam50-B
           PE=2 SV=1
          Length = 343

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 318 KNKHIFPASRWEPYDPEKKWDKYTI 342


>sp|Q2VPH1|F50AA_XENLA Protein FAM50A A OS=Xenopus laevis GN=fam50-A
           PE=2 SV=1
          Length = 340

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 315 KNKHIFPASRWEPYDPEKKWDKYTI 339


>sp|Q299F9|FAM50_DROPS Protein FAM50 homolog OS=Drosophila
           pseudoobscura pseudoobscura GN=GA11514 PE=3 SV=1
          Length = 358

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           +NKHIFPASRWE YDPTK +++YTI
Sbjct: 326 RNKHIFPASRWEPYDPTKSYDKYTI 350
tr_hit_id Q69JZ7
Definition tr|Q69JZ7|Q69JZ7_ORYSJ Os09g0535300 protein OS=Oryza sativa subsp. japonica
Align length 28
Score (bit) 68.6
E-value 2.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912030|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_C03.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q69JZ7|Q69JZ7_ORYSJ Os09g0535300 protein OS=Oryza sativa subs...    69   2e-10
tr|B8BDW1|B8BDW1_ORYSI Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|B7ZYJ9|B7ZYJ9_MAIZE Putative uncharacterized protein OS=Zea m...    69   2e-10
tr|A9SNP6|A9SNP6_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|A7P864|A7P864_VITVI Chromosome chr3 scaffold_8, whole genome ...    69   2e-10
tr|A3C0Z5|A3C0Z5_ORYSJ Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|Q8H110|Q8H110_ARATH Putative XAP-5 protein OS=Arabidopsis tha...    68   2e-10
tr|A9LLF2|A9LLF2_BRAJU XAP5 family protein OS=Brassica juncea PE...    68   2e-10
tr|A9T8I3|A9T8I3_PHYPA Predicted protein OS=Physcomitrella paten...    67   4e-10
tr|Q2HYM0|Q2HYM0_ICTPU Putative uncharacterized protein (Fragmen...    54   6e-06
tr|B5DES4|B5DES4_XENTR LOC734115 protein OS=Xenopus tropicalis G...    54   6e-06
tr|Q05AF0|Q05AF0_MOUSE D0HXS9928E protein OS=Mus musculus GN=D0H...    54   6e-06
tr|B5DF16|B5DF16_RAT FAM50A protein (Fragment) OS=Rattus norvegi...    54   6e-06
tr|A8ITQ5|A8ITQ5_CHLRE Predicted protein OS=Chlamydomonas reinha...    54   6e-06
tr|Q6PJH5|Q6PJH5_HUMAN FAM50A protein (Fragment) OS=Homo sapiens...    54   6e-06
tr|B2R997|B2R997_HUMAN cDNA, FLJ94289, Homo sapiens DNA segment ...    54   6e-06
tr|Q4T1H5|Q4T1H5_TETNG Chromosome undetermined SCAF10576, whole ...    53   8e-06
tr|B0KWX1|B0KWX1_CALJA Plexin A3 (Predicted) OS=Callithrix jacch...    53   8e-06
tr|B1MTV6|B1MTV6_CALMO XAP-5 protein (Predicted) OS=Callicebus m...    52   2e-05
tr|A9CB65|A9CB65_PAPAN Plexin A3 (Predicted), 5 prime (Fragment)...    52   2e-05
tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragmen...    52   2e-05
tr|B6KNM7|B6KNM7_TOXGO XAP5 protein, putative OS=Toxoplasma gond...    51   4e-05
tr|B8C484|B8C484_THAPS Predicted protein OS=Thalassiosira pseudo...    50   5e-05
tr|Q5DG71|Q5DG71_SCHJA SJCHGC00886 protein OS=Schistosoma japoni...    50   8e-05
tr|Q5DA73|Q5DA73_SCHJA Putative uncharacterized protein OS=Schis...    50   8e-05
tr|B2L4W6|B2L4W6_XENBO Fam50a (Fragment) OS=Xenopus borealis GN=...    49   1e-04
tr|B4QY52|B4QY52_DROSI GD18051 OS=Drosophila simulans GN=GD18051...    49   1e-04
tr|B4PR86|B4PR86_DROYA GE10531 OS=Drosophila yakuba GN=GE10531 P...    49   1e-04
tr|B4N7Y4|B4N7Y4_DROWI GK11956 OS=Drosophila willistoni GN=GK119...    49   1e-04
tr|B4MBK3|B4MBK3_DROVI GJ14286 OS=Drosophila virilis GN=GJ14286 ...    49   1e-04

>tr|Q69JZ7|Q69JZ7_ORYSJ Os09g0535300 protein OS=Oryza sativa subsp.
           japonica GN=P0569E11.5 PE=2 SV=1
          Length = 333

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 306 KNKHIFPASRWEIYDPTKKWERYTIHGD 333


>tr|B8BDW1|B8BDW1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32174 PE=4 SV=1
          Length = 333

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 306 KNKHIFPASRWEIYDPTKKWERYTIHGD 333


>tr|B7ZYJ9|B7ZYJ9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 332

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 305 KNKHIFPASRWEIYDPTKKWERYTIHGD 332


>tr|A9SNP6|A9SNP6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_132717 PE=4 SV=1
          Length = 333

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 306 KNKHIFPASRWEIYDPTKKWERYTIHGD 333


>tr|A7P864|A7P864_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036058001
           PE=4 SV=1
          Length = 334

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 307 KNKHIFPASRWEIYDPTKKWERYTIHGD 334


>tr|A3C0Z5|A3C0Z5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028967 PE=4 SV=1
          Length = 321

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 294 KNKHIFPASRWEIYDPTKKWERYTIHGD 321


>tr|Q8H110|Q8H110_ARATH Putative XAP-5 protein OS=Arabidopsis
           thaliana GN=At2g21150 PE=2 SV=1
          Length = 337

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 310 KNKHIFPASRWEIYDPTKKWERYTVHGD 337


>tr|A9LLF2|A9LLF2_BRAJU XAP5 family protein OS=Brassica juncea PE=2
           SV=1
          Length = 335

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 308 KNKHIFPASRWEIYDPTKKWERYTVHGD 335


>tr|A9T8I3|A9T8I3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_141817 PE=4 SV=1
          Length = 332

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTIHGD 428
           KNKHIFPASRWEIYDPTK+WERYTIHGD
Sbjct: 305 KNKHIFPASRWEIYDPTKRWERYTIHGD 332


>tr|Q2HYM0|Q2HYM0_ICTPU Putative uncharacterized protein (Fragment)
           OS=Ictalurus punctatus PE=2 SV=1
          Length = 88

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 511 KNKHIFPASRWEIYDPTKKWERYTI 437
           KNKHIFPASRWE YDP KKW++YTI
Sbjct: 63  KNKHIFPASRWEPYDPEKKWDKYTI 87