BP912031
Clone id YMU001_000012_C04
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTTTCTTGCTTTTTCTGCGCTTTTTCCGCCTTTTCGCATCTTCACTAGAAGTAGAGGAC
GACGAATTGTCTGAACTCTTTGAAGAAGAATTAAAATATGAGTCATCCTCTAAATGAGCG
ACGGCTCTTGGATCAACTCGCCACCTTGAAAGTTGACTTGTCGGCCCAAATAATTGGAAA
AATCCGCCGATTTCCTCTTCTTCTGAAAGTGCGCACTATGTCAAGCCTTTCATTATCTAG
TTCATCTTCTTGTTAAGAACTATCCAGCTCTTTATGCAAGTATAATTTTCGCTATTCTAC
ATTCTTCTGTCCTTTGAACTTTCTTCCCGACCTACGAGGAGAATCATTGGCCTTACGCCA
TCTCAAGTATGGGTAATTCTTCAGGTGTTTCGCAAATTTCGTATCTCTGGAGTATGTGAT
CAATCTTTTCACACGTGTCAGCTTGCAATTGATGTTTGTGCTCCGCTCTGGCAAACTTCC
CTACTGCAAATTTCCCCAATTCTTCATTCTTTTCTTCAGTTCCCACGCCGGGTTTCAACT
TTTCT
■■Homology search results ■■ -
sp_hit_id P47525
Definition sp|P47525|SYP_MYCGE Prolyl-tRNA synthetase OS=Mycoplasma genitalium
Align length 59
Score (bit) 33.5
E-value 0.68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912031|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_C04.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P47525|SYP_MYCGE Prolyl-tRNA synthetase OS=Mycoplasma genital... 33 0.68
sp|Q58713|Y1317_METJA Uncharacterized MFS-type transporter MJ131... 30 5.8
sp|B2XWN0|MATK_FAGEA Maturase K OS=Fagopyrum esculentum subsp. a... 30 7.6

>sp|P47525|SYP_MYCGE Prolyl-tRNA synthetase OS=Mycoplasma genitalium
GN=proS PE=3 SV=1
Length = 483

Score = 33.5 bits (75), Expect = 0.68
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -3

Query: 468 ERSTNINCKLTRVKRLITYSR-DTKFAKHLKNYPYLRWRKANDSPRRSGRKFKGQKNVE 295
E++ NI +LTR+K +T++ T+F + NY +RKAND + + + K +E
Sbjct: 364 EKTINIFNRLTRLKTSLTFANLQTEFVNLVNNYHTEMYRKANDLVEQKLARVQTLKEIE 422


>sp|Q58713|Y1317_METJA Uncharacterized MFS-type transporter MJ1317
OS=Methanocaldococcus jannaschii GN=MJ1317 PE=3 SV=1
Length = 398

Score = 30.4 bits (67), Expect = 5.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2

Query: 281 YNFRYSTFFCPLNFLPDLRGES--LALRHLKYG*FFRCFANFVSLEYVINLF 430
YN Y+TF P L D G L + ++ YG FA F+S + +I LF
Sbjct: 269 YNIFYATFSIPFGILSDKIGRKSVLTIGYIVYGIVSLGFAYFISQKSLILLF 320


>sp|B2XWN0|MATK_FAGEA Maturase K OS=Fagopyrum esculentum subsp.
ancestrale GN=matK PE=3 SV=1
Length = 507

Score = 30.0 bits (66), Expect = 7.6
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 19/99 (19%)
Frame = +2

Query: 287 FRYSTFFCPL-NFLPDLRGESLALRHLKYG*FFRCFANFVSLEYVINLFT---RVSLQ-- 448
F Y+++ C + LR +S LR YG F ++ LE+ + +FT RV LQ
Sbjct: 211 FLYNSYVCECESIFVFLRNQSSHLRSTSYGAFLARVYFYLKLEHFLKVFTKHCRVILQFF 270

Query: 449 ----LMFVLRSGK---------LPYCKFPQFFILFFSSH 526
+ ++ GK L KF +F+ F+ H
Sbjct: 271 KDPFIHYIRYQGKWILASRGTFLLMTKFKYYFVNFWQCH 309


tr_hit_id A2P834
Definition tr|A2P834|A2P834_VIBCH Putative uncharacterized protein OS=Vibrio cholerae 1587
Align length 81
Score (bit) 33.5
E-value 7.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912031|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_C04.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2P834|A2P834_VIBCH Putative uncharacterized protein OS=Vibri... 33 7.6
tr|Q7S547|Q7S547_NEUCR Putative uncharacterized protein OS=Neuro... 33 9.9

>tr|A2P834|A2P834_VIBCH Putative uncharacterized protein OS=Vibrio
cholerae 1587 GN=A55_0257 PE=4 SV=1
Length = 642

Score = 33.5 bits (75), Expect = 7.6
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +3

Query: 192 FLFF*KCALCQAFHYLVHLLVKN--YPALYASIIFAILHSSVL*TFFP-TY---EENHWP 353
FLF C F Y++ LL+K Y S+I I+ S VL TF+P TY +
Sbjct: 150 FLFIFLCIFFSIFSYILSLLMKEKTYSIFLVSVISFIVASIVLYTFYPGTYTNDSADQLH 209

Query: 354 YAISSMGNSSGVSQISYLWSM 416
AI+S + +S+ WS+
Sbjct: 210 QAITSNYSDWHPPLMSFFWSI 230


>tr|Q7S547|Q7S547_NEUCR Putative uncharacterized protein
OS=Neurospora crassa GN=NCU05861 PE=4 SV=1
Length = 1640

Score = 33.1 bits (74), Expect = 9.9
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3

Query: 267 ALYASIIFAILHSSVL*TFFPTYEENHWPYAISSMGNSSGVSQISYLWSM*SIF 428
ALY +++ AI H S+L PT NH + +G GV I +L ++ S+F
Sbjct: 90 ALYEALLKAITHPSLL--AHPTASSNHLAMLYTLIGEEDGVEGIEWLTTLTSLF 141