BP912038 [AcEST]

BP912038
Clone id	YMU001_000012_C12
Library	YMU01
Length	519
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000012_C12.
Accession	BP912038
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AGGATGTTATGCATGACTTTGAGTGCGAGATGGAGGAGATGGTGTGTGGCACATGTGGTT GCCCAGATGTAATCTTCTATGTTACACAAGATTCTTTGGGATCGCAAAGCAAGGTCAACT CTCCAGATGCAATCACTTGCAATTGCATCTTGAAGGCATGTGGTACTAGGCAAAAATGTT GATCTGTCGGCCTTCACTCCAAATCTGTTAGCATAGTCAACAGACAGACTATTGCTTTCC CCCTAGGCTTCATGCATGAGTGTGAAAGCTCTCCATTGGTTCTGACGACTGAGGATGTCA GGCCAAGCTTTTGCATCAAAATGGAGAAGTTTATAGGTAAAAAGTGTTTTGCAGAGATTA ATAGCGATTGACTCACCAGAGTTCCTAGGAAGGACGGTCTCATTGGTGCCTTTAAAATAT GTTAGCTCTAGACTGTCTGCATGACCCCTCTCCAACAGTTCACTTTCTTATTCAATTGTC CAGTCTCCAATTGATATAGTGGTTTAATTGAACAAGTCA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912038\|Adiantum capillus-veneris mRNA, clone: YMU001_000012_C12. (519 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q1WJS5
Definition	tr\|Q1WJS5\|Q1WJS5_9HIV1 Envelope glycoprotein (Fragment) OS=Human immunodeficiency virus 1
Align length	48
Score (bit)	34.3
E-value	3.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912038\|Adiantum capillus-veneris mRNA, clone: YMU001_000012_C12. (519 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q1WJS5\|Q1WJS5_9HIV1 Envelope glycoprotein (Fragment) OS=Human... 34 3.8 >tr\|Q1WJS5\|Q1WJS5_9HIV1 Envelope glycoprotein (Fragment) OS=Human immunodeficiency virus 1 GN=env PE=4 SV=1 Length = 189 Score = 34.3 bits (77), Expect = 3.8 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +3 Query: 12 HDFECEMEEMVCGTCGCPDVIFYVTQDSLGSQSKVNSPDAITCNCILK 155 H F C E C T G + F ++DS S S +S D IT C +K Sbjct: 104 HSFNCAGEFFYCNTSGLFNRTFNSSRDSNTSPSNTSSNDTITLQCRIK 151