BP912042
Clone id YMU001_000012_D05
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGAGGACGATCTTTTTGATACATCGAGGAAGCAGAGCATGATCTTTCGATGAAGTAAGG
CAAGCTTGTGGACCTTGAGATTTTTATCAAGCATGCCTTGTGAATGTTTGAAGATAAATC
ACATTGTTTTGAGCATAGAATTAAGCTTGCCAAAGTTTCCACTGATTGAAGCAAAGGCTT
CAGCTTTATGAATATGGAGTAATCCCTTTTAAAATTTGAGATATGCTCCGATCATAAGGA
TTTGGGGGGTTTTGAAGAGGTATCTGGACAATTGTATATGGGGGTCAAAGAATTGATTAC
GATGTCAACACGACATGAACCCAATCAAGGGTTTTTCATGTACATAGGAACAACTCATGG
TCTATCATATTCCACAACTATGAGCCAAAATTAAAGTAAAATACATGAGAAGCCATGGCT
ACGAACCGGATATAGCTCAGGCCGCCAGAGTGGTTCTAGTTGGAAATTTATACACCACAA
TGCAAAGAGCAAGGCTTTGTAGAAGTTTTATCAAAATTGGAATTGGGCTTGGTGGGCAAC
A
■■Homology search results ■■ -
sp_hit_id A9NHF4
Definition sp|A9NHF4|SYY_ACHLI Tyrosyl-tRNA synthetase OS=Acholeplasma laidlawii (strain PG-8A)
Align length 56
Score (bit) 30.0
E-value 7.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912042|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_D05.
(541 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A9NHF4|SYY_ACHLI Tyrosyl-tRNA synthetase OS=Acholeplasma laid... 30 7.5
sp|Q82SA9|OPGG_NITEU Glucans biosynthesis protein G OS=Nitrosomo... 30 9.9
sp|Q8RK06|AVRD1_PSESG Effector protein AvrPphDPgy OS=Pseudomonas... 30 9.9

>sp|A9NHF4|SYY_ACHLI Tyrosyl-tRNA synthetase OS=Acholeplasma
laidlawii (strain PG-8A) GN=tyrS PE=3 SV=1
Length = 410

Score = 30.0 bits (66), Expect = 7.5
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3

Query: 330 GFSCT*EQLMVYHIPQL*AKIKVKYMRSHGYEPDIAQAARVVLVGNLYTTMQRARL 497
G+ T E L V H+ Q+ +++ Y++ HG+ P + L+G+ T +R+ L
Sbjct: 36 GYDPTGESLTVGHLVQI---VRMLYLQKHGHTPVVLIGGGTGLIGDPRETSERSLL 88


>sp|Q82SA9|OPGG_NITEU Glucans biosynthesis protein G OS=Nitrosomonas
europaea GN=opgG PE=3 SV=2
Length = 518

Score = 29.6 bits (65), Expect = 9.9
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Frame = +2

Query: 137 RIKLAKVSTD*SKGFSFMNME*SLLKFEICSDHKDL--GGFEEVSGQLYMGVKELITMST 310
R+ ++ ST+ +GF + +FE D DL + G+ G ELI + T
Sbjct: 303 RLAISSFSTENPQGFGLLQRGRQFSRFEDLDDRYDLRPSAWITPKGKWGKGSVELIEIPT 362

Query: 311 RHEPNQGFFMY--------IGTTHGLSYSTTMSQN*SKIH 406
E N + G Y+ T S++ K+H
Sbjct: 363 NDETNDNIVAFWTPDQLPEAGKEINFKYTLTFSKDEDKLH 402


>sp|Q8RK06|AVRD1_PSESG Effector protein AvrPphDPgy OS=Pseudomonas
syringae pv. glycinea GN=avrPphDPgy PE=3 SV=1
Length = 698

Score = 29.6 bits (65), Expect = 9.9
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -2

Query: 324 LGSCRV--DIVINSLTPIYNCPDTSSKPPKSL*SEHISNFKRDYSIFIKLKPLLQSVETL 151
LG RV ++S +P+ + PD S+PP S+HI + +RD + P++Q++ +
Sbjct: 160 LGMSRVLSQDAVDSSSPLLSSPD-HSRPP----SQHIGSVRRDSDSLVSDNPVVQALLSF 214

Query: 150 A 148
A
Sbjct: 215 A 215


tr_hit_id Q2MIZ2
Definition tr|Q2MIZ2|Q2MIZ2_MEDTR Cytochrome P450 monooxygenase CYP93B12 OS=Medicago truncatula
Align length 83
Score (bit) 33.1
E-value 9.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912042|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_D05.
(541 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2MIZ2|Q2MIZ2_MEDTR Cytochrome P450 monooxygenase CYP93B12 OS... 33 9.7

>tr|Q2MIZ2|Q2MIZ2_MEDTR Cytochrome P450 monooxygenase CYP93B12
OS=Medicago truncatula GN=CYP93B12 PE=2 SV=2
Length = 495

Score = 33.1 bits (74), Expect = 9.7
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1

Query: 280 HIQLSRYLFKTPQILMIGAYLKF*KGLLHIHKAEAFASISGNFGKLNSM-LKTM*FIFKH 104
H +L + P I +IG +L K L+H +AF +S +G L S+ L + FI +
Sbjct: 32 HARLPPHPPSPPAIPIIG-HLHLLKPLIH----QAFRHLSDQYGPLISLRLGSSQFIIVN 86

Query: 103 SQGMLDKNLKVHKLALLHRKIML 35
+ + + LK H+L HRK+ +
Sbjct: 87 TPSLAKEFLKTHELTYSHRKMSI 109