BP912046 |
Clone id |
YMU001_000012_D09 |
Library |
YMU01 |
Length |
587 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_D09. |
Accession |
BP912046 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2550Contig1 |
Sequence |
CGTAACTTCTTGTGCTTCCCCTTCCTCTTGGCTATCACTTTCTTAGCCTCGACAACTTTT TGTTTTGCAATGCTTATAACAGAGGAGATGAGTTCCTCTTTTTCACTAACCCAGCTACAA GATTTTTCTACGCTTCTTGCGGAATTCTCTAGCCTCAGACTTGCAGAAGATAGATTCCCA CCTTCCACATCCTCTGCAAAACTAAACATAGCTTTCCTCTTTGTTGAAGATGATCCACTT AAAGCTTTGCTCAGCTTGTCCTTCCCAAGGTCTCCTTCATTCATTTTAGAAGGCTGCACA GTGGCCAAGTCAGGATTTCCACTACACATTTTATCTGCTTTCCCACCAGCATCATGTGCG GCTACACCCAAAGCATCATTGACATAATTCTTCCCCCTAGTTTTAGGGGATCTTTTGGAT CTTGGGAGTGAAAATCTTCCTCTTCTATTGTGCTTCCCCTTTCTCTCACCCATCACTTTC TTAGCATTGGCGACTTTTTGCTCCACAATGCTTATAACAGAGGAAACGAGTTCCACTTTT TCACTAGCCTGGCTACGAGATTTTTCCATGCTCCTTGCAGACTTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3LSN3 |
Definition |
sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Pichia stipitis |
Align length |
91 |
Score (bit) |
34.7 |
E-value |
0.36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1GHZ0 |
Definition |
tr|Q1GHZ0|Q1GHZ0_SILST Putative uncharacterized protein OS=Silicibacter sp. (strain TM1040) |
Align length |
158 |
Score (bit) |
40.0 |
E-value |
0.097 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912046|Adiantum capillus-veneris mRNA, clone: YMU001_000012_D09. (587 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q1GHZ0|Q1GHZ0_SILST Putative uncharacterized protein OS=Silic... 40 0.097 tr|Q80VF3|Q80VF3_MOUSE Prdm2 protein (Fragment) OS=Mus musculus ... 39 0.22 tr|A2A7B5|A2A7B5_MOUSE PR domain containing 2, with ZNF domain O... 39 0.22 tr|B0WPF4|B0WPF4_CULQU Lkb1 interacting protein OS=Culex quinque... 37 1.1 tr|Q3AD06|Q3AD06_CARHZ CoxE-like protein OS=Carboxydothermus hyd... 36 1.4 tr|B3RJ20|B3RJ20_TRIAD Putative uncharacterized protein OS=Trich... 36 1.4 tr|Q7CTX3|Q7CTX3_AGRT5 Glucose dehydrogenase OS=Agrobacterium tu... 36 1.8 tr|A4S4T2|A4S4T2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 36 1.8 tr|A5K3S6|A5K3S6_PLAVI Putative uncharacterized protein OS=Plasm... 36 1.8 tr|A0CTL6|A0CTL6_PARTE Chromosome undetermined scaffold_27, whol... 35 2.4 tr|Q1BJ58|Q1BJ58_BURCA Transcriptional regulator, LysR family OS... 35 3.1 tr|B1K538|B1K538_BURCC Transcriptional regulator, LysR family OS... 35 3.1 tr|A0B395|A0B395_BURCH Transcriptional regulator, LysR family OS... 35 3.1 tr|A2W2R6|A2W2R6_9BURK Regulatory protein, LysR OS=Burkholderia ... 35 3.1 tr|Q8P9Q5|Q8P9Q5_XANCP Filamentous haemagglutinin OS=Xanthomonas... 35 4.1 tr|Q4UU25|Q4UU25_XANC8 Filamentous haemagglutinin OS=Xanthomonas... 35 4.1 tr|B7Q6B8|B7Q6B8_IXOSC CBF1-interacting corepressor, putative (F... 35 4.1 tr|B4G2G1|B4G2G1_DROPE GL23612 OS=Drosophila persimilis GN=GL236... 35 4.1 tr|Q0CNS2|Q0CNS2_ASPTN Proteasome subunit alpha type 6 OS=Asperg... 35 4.1 tr|B1I082|B1I082_LYSSC Putative uncharacterized protein OS=Lysin... 34 5.3 tr|A4C3Q4|A4C3Q4_9GAMM Putative uncharacterized protein OS=Pseud... 34 5.3 tr|B6KNN2|B6KNN2_TOXGO Putative uncharacterized protein OS=Toxop... 34 5.3 tr|B3MM50|B3MM50_DROAN GF15070 OS=Drosophila ananassae GN=GF1507... 34 5.3 tr|B6W922|B6W922_9FIRM Putative uncharacterized protein OS=Anaer... 34 7.0 tr|A2Q7V6|A2Q7V6_ASPNC Similarity to hypothetical protein BX9088... 34 7.0 tr|B1VB10|B1VB10_PHYAS Putative IMP dehydrogenase/GMP reductase ... 33 9.1 tr|B1V9U4|B1V9U4_PHYAS Putative IMP dehydrogenase/GMP reductase ... 33 9.1 tr|B1V8S5|B1V8S5_PHYAS Putative IMP dehydrogenase/GMP reductase ... 33 9.1 tr|A9BWY4|A9BWY4_DELAS Putative uncharacterized protein OS=Delft... 33 9.1 tr|Q1KUX6|Q1KUX6_9ROSI Putative uncharacterized protein OS=Cleom... 33 9.1
>tr|Q1GHZ0|Q1GHZ0_SILST Putative uncharacterized protein OS=Silicibacter sp. (strain TM1040) GN=TM1040_0993 PE=4 SV=1 Length = 219
Score = 40.0 bits (92), Expect = 0.097 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 15/158 (9%) Frame = -1
Query: 431 SLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCS-----GNPDLATVQPSKMNEGDL 267 ++PR + R K D AA A +A K + P A V+P+K+ + Sbjct: 39 AVPRLGVARAQRLKAAAQDMTKAAAEPAAPRAAKSTARAKAPAKPRTARVKPAKLKAVEA 98
Query: 266 GKDKLSKA-------LSGSSSTKRKAMFSFAEDVEGGNLSS---ASLRLENSARSVEKSC 117 KD A ++ S R+++ S E L++ A+ +A++ +K+ Sbjct: 99 AKDAAQSAAKAVKAGVNASEEETRESLQSAVAAAEAARLAAEEKAAKAEAKAAKAAKKAK 158
Query: 116 SWVSEKEELISSVISIAKQKVVEAKKVIAKRKGKHKKL 3 + +++ E S A ++ +AKK IAK K K KK+ Sbjct: 159 ALMAQFAEAKEKASSKAAKEKTKAKKEIAKEKAKAKKI 196
>tr|Q80VF3|Q80VF3_MOUSE Prdm2 protein (Fragment) OS=Mus musculus GN=Prdm2 PE=2 SV=1 Length = 547
Score = 38.9 bits (89), Expect = 0.22 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 22/168 (13%) Frame = -1
Query: 458 GKHNRRGRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCSGNPDLATVQPS-KM 282 G N+ FS P+ SP R ++ + G H + +D+ S NP T KM Sbjct: 336 GSLNKHAAFSCPKKPLSPSKRKVSHSSKKGG---HTSSASSDRNSSSNPRRRTADTEIKM 392
Query: 281 N--EGDLGKDKL-----SKALSGSSSTKRKAMFSFAEDVEGGNLSSASLRLENSAR---- 135 + LGK + ++A SSS + + FA V+ SS+SLR + R Sbjct: 393 QSMQAPLGKTRARSTGPAQASLPSSSFRSRQNVKFAASVKSKKASSSSLRNSSPVRMAKI 452
Query: 134 ---------SVEKSCSWVSEKEELISSVISIAKQK-VVEAKKVIAKRK 21 +V KS S + S + + K K V+++K +A +K Sbjct: 453 THVEGKKSKAVAKSHSTQLSSKASRSLHVKVQKSKAVLQSKTALASKK 500
>tr|A2A7B5|A2A7B5_MOUSE PR domain containing 2, with ZNF domain OS=Mus musculus GN=Prdm2 PE=1 SV=1 Length = 1709
Score = 38.9 bits (89), Expect = 0.22 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 22/168 (13%) Frame = -1
Query: 458 GKHNRRGRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCSGNPDLATVQPS-KM 282 G N+ FS P+ SP R ++ + G H + +D+ S NP T KM Sbjct: 1459 GSLNKHAAFSCPKKPLSPSKRKVSHSSKKGG---HTSSASSDRNSSSNPRRRTADTEIKM 1515
Query: 281 N--EGDLGKDKL-----SKALSGSSSTKRKAMFSFAEDVEGGNLSSASLRLENSAR---- 135 + LGK + ++A SSS + + FA V+ SS+SLR + R Sbjct: 1516 QSMQAPLGKTRARSTGPAQASLPSSSFRSRQNVKFAASVKSKKASSSSLRNSSPVRMAKI 1575
Query: 134 ---------SVEKSCSWVSEKEELISSVISIAKQK-VVEAKKVIAKRK 21 +V KS S + S + + K K V+++K +A +K Sbjct: 1576 THVEGKKSKAVAKSHSTQLSSKASRSLHVKVQKSKAVLQSKTALASKK 1623
>tr|B0WPF4|B0WPF4_CULQU Lkb1 interacting protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ009050 PE=4 SV=1 Length = 1325
Score = 36.6 bits (83), Expect = 1.1 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 6/125 (4%) Frame = -1
Query: 470 GERKGKHNRRGRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCSGNPDLATVQP 291 GE +GK P S S + KNY+ A + +G D +C+ + Sbjct: 902 GEPEGKEPASAAAKTPPSAASAQAHKKNYLTAANLTESSSSGSVTDSVCTAYESNQEQKQ 961
Query: 290 SKMNEGDLGKDKLSKALSG------SSSTKRKAMFSFAEDVEGGNLSSASLRLENSARSV 129 S ++ + DK K +G ST KA S ++ GG S ++ + + ++ Sbjct: 962 SSTSDETVDSDKSKKGDNGLKTTAAQQSTAAKAETSVISNMLGGLFQSTNMLMSKTPKAN 1021
Query: 128 EKSCS 114 + S Sbjct: 1022 KSETS 1026
>tr|Q3AD06|Q3AD06_CARHZ CoxE-like protein OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=CHY_1132 PE=4 SV=1 Length = 411
Score = 36.2 bits (82), Expect = 1.4 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Frame = -1
Query: 440 GRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGG------KADKMCSGNPDLATVQPSKMN 279 GR + S+R +TR K Y+N + A+ + G K + P + + + Sbjct: 197 GRLNAKASRRLKETRRKKYINLRKTIRANLSHGGVLFNLKYREKKKNKPQITLLIDVSAS 256
Query: 278 EGDLGKDKLSKALSGSSSTKRKAMFSFAEDVEGGNLSSASLRLENSARSVEKSCSW--VS 105 K LS + + S K+ ++ FAED+E L + + L + R +E S W + Sbjct: 257 MAIYAKFALSFLFAVARSLKKIELYLFAEDLEVLPLKNYNKSLLDLKRLIEDSQQWGRGT 316
Query: 104 EKEELISSVISIAKQK 57 + + S ++IAK + Sbjct: 317 NLNQALKSYLNIAKTR 332
>tr|B3RJ20|B3RJ20_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_52538 PE=4 SV=1 Length = 880
Score = 36.2 bits (82), Expect = 1.4 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 12/169 (7%) Frame = -1
Query: 497 KVANAKKVMGERKGKHNRRGRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCSG 318 K ++KK + + GK + + + S S KTR + ++ +G + K+ + Sbjct: 52 KKRDSKKTVNQASGKASHKTKESKTELSISSKTRSTAREKSTSSIKSN-SGSRKRKLAAR 110
Query: 317 NPDLATVQPSKMNEGDLGKDK-------LSKALSGSSSTKRKAMFSFAEDVEGGNLSSAS 159 D+ + + L K K L K SSS RK + SF +DV+ + + Sbjct: 111 KSDIESTSSGDDEQELLDKPKTKKIKLKLDKLAVKSSSKSRKEVTSFTKDVDETPIKTKV 170
Query: 158 LRL-----ENSARSVEKSCSWVSEKEELISSVISIAKQKVVEAKKVIAK 27 +L S++ +KS S V EK I S++ + + + K I + Sbjct: 171 SKLIFKPMPESSQKSKKSISPVREKPINIIDEPSLSPEDIEGSNKRILR 219
>tr|Q7CTX3|Q7CTX3_AGRT5 Glucose dehydrogenase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcd PE=4 SV=2 Length = 409
Score = 35.8 bits (81), Expect = 1.8 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = -1
Query: 350 AGGKADKMCSGNPDLATVQPSKMNEGDLGKDKLSKALSGSSSTKRKAMFSFAEDVEGGN- 174 A GKA G PD+A+ +G L L AL+ T RK FSF+E +GGN Sbjct: 98 ADGKAGPAIDGVPDVASD-----GQGGL----LDIALAPDFETSRKIFFSFSEPRDGGNG 148
Query: 173 --LSSASLRLENSARSVE 126 ++SA L E A +E Sbjct: 149 TSVASAKLTEEGGAAKLE 166
>tr|A4S4T2|A4S4T2_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_2732 PE=4 SV=1 Length = 498
Score = 35.8 bits (81), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = -1
Query: 380 NDALGVAAHDAGGKADKMCSGNPDLATVQP-----SKMNEGDLGKDKLSKALSGSSSTKR 216 N+ +G A DAG + S P A+ + K+ GDL + L ++ Sbjct: 367 NEIIGAARKDAGASHKEPLSSLPRAASARRVGELLGKVANGDLSGRMAKQVLEALMNSDE 426
Query: 215 KAMFSFAEDVEGGNLSSASLRLENSARSV 129 +A+ EDV GG S+ +L++ R+V Sbjct: 427 RALAEIVEDVCGGGQMSSDDQLQDICRAV 455
>tr|A5K3S6|A5K3S6_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_118070 PE=4 SV=1 Length = 1526
Score = 35.8 bits (81), Expect = 1.8 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = -1
Query: 467 ERKGKHNRRGRFSLPRSKRSPKTRGKNYVNDALGVAAHDAGGKADKMCSGNPDLATVQPS 288 ERKGK N+ F + K+ + + V + + + + N A V+ + Sbjct: 22 ERKGKTNKIEPFHVNEEKKEVEIGSFHNVENNADIFGIGVSKNEIDLNNNNFRSAVVKTN 81
Query: 287 KMNEGDLGKDKLSKALSGSSSTKRKAMFSFAEDVEG--GNLSSASLRLENSARSVEKSCS 114 E + K L ++ SG +K M S + +E G + S S +EN + +E S Sbjct: 82 ADMEKEERKSGLMESKSGLMESKSGLMESKSGLMESKSGLMESKSGLMENKSGLMENKGS 141
Query: 113 WVSEKEELISSVISIA------KQKVVEAKKVIAKR 24 W +E+E L++ +++ +++ V+ K +I +R Sbjct: 142 WETEEENLLNDEANLSDEGEEVEEENVDEKDLILQR 177
>tr|A0CTL6|A0CTL6_PARTE Chromosome undetermined scaffold_27, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00010367001 PE=4 SV=1 Length = 3437
Score = 35.4 bits (80), Expect = 2.4 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 17/148 (11%) Frame = -1
Query: 395 GKNYVNDALGVAAHDAGGKADKM-------------CSGNPDLATVQPSKMNEGDLGKDK 255 G+ V + + V DA GK K+ SG+ ++ + SK++ G Sbjct: 652 GEEDVYEQIEVEEPDANGKVRKVKKTVKRRVKKTKKISGSSGSSSSKSSKISSSSSGSKS 711
Query: 254 LSKALSGSSSTKRKAMFSFAEDVEGGNLSSASLRLENSARSVEKSCSWVSEKEELISSVI 75 S + S SSS++ A G+ SS+ N + S + + + EE I I Sbjct: 712 SSSSSSSSSSSQASAQ---------GSASSSQSTQSNESASKDNTSQEGDDGEEDIYEQI 762
Query: 74 SI----AKQKVVEAKKVIAKRKGKHKKL 3 + A KV + KK + +R K KK+ Sbjct: 763 EVEEPDANGKVRKVKKTVKRRVKKIKKI 790
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