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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912048
Clone id YMU001_000012_D11
Library
Length 293
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCTTTGGTATGTAATGTACATTCAGAGAGTGACCTTATTACTAAGCCTCAAAGGACTCCA
GCTGGATGGAACCCCTAAGAGGTACATATTCACCCAATGTAGGCACCCAAATGCTCAGAG
AGCTGCGATCTGTCTATGCTCTCATGGTGGTAGGCTTTACAGGCAAAGTAGAAGACTGTC
TGCAAAAGGAAGCCCATGAGGTCCACAAATGAAAGCATTACGATCAGAGTACACCCGATC
GCTACCTTCCATGCCACACGGTGAACCCCGTGAACACTCCCATGTGCCACCCA
■■Homology search results ■■ -
sp_hit_id Q27877
Definition sp|Q27877|ENO_SCHMA Enolase OS=Schistosoma mansoni
Align length 53
Score (bit) 32.7
E-value 0.57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912048|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_D11.
         (293 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q27877|ENO_SCHMA Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1    33   0.57 
sp|P33676|ENO_SCHJA Enolase OS=Schistosoma japonicum GN=ENO PE=2...    30   2.8  
sp|A5CC73|SYY_ORITB Tyrosyl-tRNA synthetase OS=Orientia tsutsuga...    30   4.8  

>sp|Q27877|ENO_SCHMA Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1
          Length = 434

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +3

Query: 81  GTYSPNV-----GTQMLRELRSVYALMVVGFTGKVEDCLQKEAHEVHK*KHYD 224
           G ++PN+     G Q+L E     A+ + G+TGKVE  +   A E HK   YD
Sbjct: 211 GGFAPNIQDNMKGLQLLEE-----AIKIAGYTGKVEIGMDCAASEFHKNGKYD 258


>sp|P33676|ENO_SCHJA Enolase OS=Schistosoma japonicum GN=ENO PE=2
           SV=1
          Length = 434

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +3

Query: 81  GTYSPNV-----GTQMLRELRSVYALMVVGFTGKVEDCLQKEAHEVHK*KHYD 224
           G ++PN+     G Q+L E     A+ + G+TGKVE  +   A E +K   YD
Sbjct: 211 GGFAPNIQDNMKGLQLLEE-----AIKIAGYTGKVEIGMDCAASEYYKKGKYD 258


>sp|A5CC73|SYY_ORITB Tyrosyl-tRNA synthetase OS=Orientia
           tsutsugamushi (strain Boryong) GN=tyrS PE=3 SV=1
          Length = 413

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = -1

Query: 167 FACKAYHHESIDRSQL-----SEHLGAYIG*ICTS*GFHPAGVL*GLVIRSLSEC 18
           F  + Y ++S D ++L     S  + AYIG  CT+   H   ++  +++R L +C
Sbjct: 7   FINRGYFYQSTDLTRLTQISNSSQIVAYIGFDCTAQSLHVGNLMQIMILRLLQQC 61
tr_hit_id A9TM42
Definition tr|A9TM42|A9TM42_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 62
Score (bit) 71.2
E-value 6.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912048|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_D11.
         (293 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TM42|A9TM42_PHYPA Predicted protein OS=Physcomitrella paten...    71   6e-14
tr|A7P2Q2|A7P2Q2_VITVI Chromosome chr1 scaffold_5, whole genome ...    68   4e-13
tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea...    75   2e-12
tr|A9SQ84|A9SQ84_PHYPA Predicted protein OS=Physcomitrella paten...    65   3e-12
tr|Q8S2H7|Q8S2H7_ORYSJ cDNA clone:001-206-C07, full insert seque...    65   3e-12
tr|A2WW10|A2WW10_ORYSI Putative uncharacterized protein OS=Oryza...    65   3e-12
tr|A2ZYP8|A2ZYP8_ORYSJ Putative uncharacterized protein OS=Oryza...    65   3e-12
tr|A2Q573|A2Q573_MEDTR Putative uncharacterized protein OS=Medic...    65   4e-12
tr|O48574|O48574_ARATH T19K24.3 protein (Putative uncharacterize...    64   5e-12
tr|Q6DBH7|Q6DBH7_ARATH At4g19950 OS=Arabidopsis thaliana GN=At4g...    62   1e-11
tr|Q0WN77|Q0WN77_ARATH Putative uncharacterized protein At4g1995...    62   1e-11
tr|B6TGY9|B6TGY9_MAIZE Putative uncharacterized protein OS=Zea m...    65   3e-11
tr|B6TWG7|B6TWG7_MAIZE Putative uncharacterized protein OS=Zea m...    64   3e-11
tr|A9S7R2|A9S7R2_PHYPA Predicted protein OS=Physcomitrella paten...    60   7e-11
tr|Q9SA06|Q9SA06_ARATH F28K20.6 protein (Putative uncharacterize...    61   3e-10
tr|Q6ZD72|Q6ZD72_ORYSJ Os08g0107100 protein OS=Oryza sativa subs...    65   1e-09
tr|B8BA37|B8BA37_ORYSI Putative uncharacterized protein OS=Oryza...    65   1e-09
tr|B8LL32|B8LL32_PICSI Putative uncharacterized protein OS=Picea...    65   2e-09
tr|Q6ZXG7|Q6ZXG7_9ROSI Putative uncharacterized protein ORF (Fra...    64   3e-09
tr|A7NSN1|A7NSN1_VITVI Chromosome chr18 scaffold_1, whole genome...    60   7e-08
tr|O49422|O49422_ARATH Putative uncharacterized protein AT4g1995...    48   1e-07
tr|A7R3G0|A7R3G0_VITVI Chromosome chr4 scaffold_519, whole genom...    57   4e-07
tr|A3BNW3|A3BNW3_ORYSJ Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|B6TI24|B6TI24_MAIZE Putative uncharacterized protein OS=Zea m...    56   1e-06
tr|A9TK92|A9TK92_PHYPA Predicted protein OS=Physcomitrella paten...    55   1e-06
tr|A7NSM6|A7NSM6_VITVI Chromosome chr18 scaffold_1, whole genome...    48   3e-04
tr|A7NSN0|A7NSN0_VITVI Chromosome chr18 scaffold_1, whole genome...    47   5e-04
tr|A7NSM9|A7NSM9_VITVI Chromosome chr18 scaffold_1, whole genome...    47   5e-04
tr|A5BKV6|A5BKV6_VITVI Putative uncharacterized protein OS=Vitis...    42   0.020
tr|A7NSN4|A7NSN4_VITVI Chromosome chr18 scaffold_1, whole genome...    39   0.17 

>tr|A9TM42|A9TM42_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_196328 PE=4 SV=1
          Length = 339

 Score = 71.2 bits (173), Expect(2) = 6e-14
 Identities = 33/62 (53%), Positives = 43/62 (69%)
 Frame = -1

Query: 278 SVHGVHRVAWKVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAY 99
           S H VH +  +V  G  L+++ + V L+G L+QTV YF CK+YHHESIDR  LSEHL  Y
Sbjct: 257 SHHHVHSLFGRVFFGLVLLLLWTAVTLIGILVQTVVYFVCKSYHHESIDRYALSEHLDGY 316

Query: 98  IG 93
           +G
Sbjct: 317 LG 318



 Score = 28.9 bits (63), Expect(2) = 6e-14
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFEA 44
           LGEY+PL+G + LE+ EA
Sbjct: 317 LGEYMPLKGPVSLEALEA 334


>tr|A7P2Q2|A7P2Q2_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030140001
           PE=4 SV=1
          Length = 318

 Score = 67.8 bits (164), Expect(2) = 4e-13
 Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
 Frame = -1

Query: 275 VHG--VHRVAWKVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGA 102
           VHG  ++ V +++ +G  L+ +L  V+L+G L+Q+VFY+ CK+YHH+ ID+S L +HLG 
Sbjct: 240 VHGGEMYGVFFRIVVGGFLVGVLVIVNLIGLLVQSVFYYVCKSYHHQGIDKSALLDHLGG 299

Query: 101 YIG 93
           Y+G
Sbjct: 300 YLG 302



 Score = 29.6 bits (65), Expect(2) = 4e-13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFE 47
           LGEYVPL+ SIQ+E+ E
Sbjct: 301 LGEYVPLKSSIQMENLE 317


>tr|A9P252|A9P252_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 344

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = -1

Query: 293 WVAHGSVHGVHRVAWKVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSE 114
           +V HG+ HG      + A G  L+ +L F  LMG L Q+VFYF CK+YHHESID+S LS+
Sbjct: 260 YVLHGNRHGAGSTG-RGAYGTVLVGLLCFAHLMGLLTQSVFYFVCKSYHHESIDKSSLSD 318

Query: 113 HLGAYIG 93
           HL  Y+G
Sbjct: 319 HLEVYLG 325


>tr|A9SQ84|A9SQ84_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_214634 PE=4 SV=1
          Length = 338

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = -1

Query: 272 HGVHRVAWKVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           H V  +  +V  G  L+++ + V L+G L+QTV YF CK+YH+ESIDR  LSEHL  Y+G
Sbjct: 258 HHVQSLVGRVFFGLMLLLLWTAVTLIGILVQTVVYFVCKSYHNESIDRYALSEHLDGYLG 317



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFEA 44
           LGEY+PL+G + LE+ EA
Sbjct: 316 LGEYMPLKGPVSLEALEA 333


>tr|Q8S2H7|Q8S2H7_ORYSJ cDNA clone:001-206-C07, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0003D09.5 PE=2 SV=1
          Length = 329

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 28/52 (53%), Positives = 40/52 (76%)
 Frame = -1

Query: 248 KVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           +V  G  L+ +L  V+L+G L+Q+VFY+ACKA+H++ IDRS L EHLG Y+G
Sbjct: 262 RVLAGAVLVSVLVCVNLLGLLVQSVFYYACKAFHNQQIDRSALYEHLGGYLG 313



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFEA 44
           LGEYVPL+ +IQ+E+ +A
Sbjct: 312 LGEYVPLKSNIQMENLDA 329


>tr|A2WW10|A2WW10_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04089 PE=4 SV=1
          Length = 329

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 28/52 (53%), Positives = 40/52 (76%)
 Frame = -1

Query: 248 KVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           +V  G  L+ +L  V+L+G L+Q+VFY+ACKA+H++ IDRS L EHLG Y+G
Sbjct: 262 RVLAGAVLVSVLVCVNLLGLLVQSVFYYACKAFHNQQIDRSALYEHLGGYLG 313



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFEA 44
           LGEYVPL+ +IQ+E+ +A
Sbjct: 312 LGEYVPLKSNIQMENLDA 329


>tr|A2ZYP8|A2ZYP8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003670 PE=4 SV=1
          Length = 214

 Score = 65.5 bits (158), Expect(2) = 3e-12
 Identities = 28/52 (53%), Positives = 40/52 (76%)
 Frame = -1

Query: 248 KVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           +V  G  L+ +L  V+L+G L+Q+VFY+ACKA+H++ IDRS L EHLG Y+G
Sbjct: 147 RVLAGAVLVSVLVCVNLLGLLVQSVFYYACKAFHNQQIDRSALYEHLGGYLG 198



 Score = 28.9 bits (63), Expect(2) = 3e-12
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFEA 44
           LGEYVPL+ +IQ+E+ +A
Sbjct: 197 LGEYVPLKSNIQMENLDA 214


>tr|A2Q573|A2Q573_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula GN=MtrDRAFT_AC160516g6v2 PE=2 SV=1
          Length = 320

 Score = 65.5 bits (158), Expect(2) = 4e-12
 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = -1

Query: 275 VHGV--HRVAWKVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGA 102
           VHG   + V  ++ IG  L+ +L  V+L+G L+Q+VFY+ CK+YHH+ ID+S L +HLG 
Sbjct: 242 VHGGDGYGVFSRIVIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQGIDKSALHDHLGG 301

Query: 101 YIG 93
           Y+G
Sbjct: 302 YLG 304



 Score = 28.5 bits (62), Expect(2) = 4e-12
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFE 47
           LGEYVPL+ SIQ+E+ +
Sbjct: 303 LGEYVPLKSSIQMENLD 319


>tr|O48574|O48574_ARATH T19K24.3 protein (Putative uncharacterized
           protein At5g44860) (Putative uncharacterized protein)
           (Gb|AAC79135.1) OS=Arabidopsis thaliana GN=At5g44860
           PE=2 SV=1
          Length = 321

 Score = 63.9 bits (154), Expect(2) = 5e-12
 Identities = 25/52 (48%), Positives = 40/52 (76%)
 Frame = -1

Query: 248 KVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           K+ +G  L+ +L  V+L+G L+Q+VFY+ CK++HH+ ID+S L +HLG Y+G
Sbjct: 254 KIVVGGFLVGILVIVNLVGLLVQSVFYYVCKSFHHQPIDKSALHDHLGGYLG 305



 Score = 29.6 bits (65), Expect(2) = 5e-12
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFE 47
           LG+YVPL+ SIQ+E+F+
Sbjct: 304 LGDYVPLKSSIQMENFD 320


>tr|Q6DBH7|Q6DBH7_ARATH At4g19950 OS=Arabidopsis thaliana
           GN=At4g19950 PE=2 SV=1
          Length = 321

 Score = 61.6 bits (148), Expect(2) = 1e-11
 Identities = 24/52 (46%), Positives = 39/52 (75%)
 Frame = -1

Query: 248 KVAIGCTLIVMLSFVDLMGFLLQTVFYFACKAYHHESIDRSQLSEHLGAYIG 93
           ++  G  L+ +L  V+L+G L+Q+VFY+ CK++HH+ ID+S L +HLG Y+G
Sbjct: 254 RIVAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFHHQEIDKSALHDHLGGYLG 305



 Score = 30.8 bits (68), Expect(2) = 1e-11
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = -2

Query: 97  LGEYVPLRGSIQLESFE 47
           LGEYVPL+ +IQ+E+FE
Sbjct: 304 LGEYVPLKSNIQMENFE 320