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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912055
Clone id YMU001_000012_E06
Library
Length 536
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTGCTTCGAAACGAGGGTAGGCACACCAGACACAAAATTGAGTGATGCGTAATACGGAC
GGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAAGTCGTCTTGCATTTCCGGAATAAG
TCTCCCGACCCCTTGCTTCCACCAAGAGAAAGCAAAAAGAACCCGGGCGGGAAAGTTTGA
TTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGGCGACGAGACCGATCTTCGTATCGAG
ATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGAAGCTAAATCTATCAAAAGAAAAGGA
AATCCTTGGGAAATTTAATATTCCCTAGTACCAATCCGTAAAAATGGAATGTAAATCCTG
GGATTGTTGACTACTAAGAGTCTCTCTTATCATTCTATGGAGTTTCCATAGATAGGTAAG
GTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCCAAACCAAGGGTGGGGCGGCAAAGAA
GATATTGGGTCTCGCCCCAATGCGGTACTCAAAGAATAGTCTTACGGGATAGAGAA
■■Homology search results ■■ -
sp_hit_id Q9ASY9
Definition sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana
Align length 46
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912055|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_E06.
         (536 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara...    33   1.1  
sp|A3MR08|Y5676_BURM7 UPF0102 protein BMA10247_3176 OS=Burkholde...    32   2.5  
sp|A2S703|Y4042_BURM9 UPF0102 protein BMA10229_A1742 OS=Burkhold...    32   2.5  
sp|A3P0J9|Y3900_BURP0 UPF0102 protein BURPS1106A_3900 OS=Burkhol...    32   2.5  
sp|Q62G58|Y2801_BURMA UPF0102 protein BMA2801 OS=Burkholderia ma...    32   2.5  
sp|A1UZH3|Y1824_BURMS UPF0102 protein BMASAVP1_A0024 OS=Burkhold...    32   2.5  
sp|Q146Q2|Y149_BURXL UPF0102 protein Bxeno_A0149 OS=Burkholderia...    32   2.5  
sp|A4F7G0|URED1_SACEN Urease accessory protein ureD 1 OS=Sacchar...    32   2.5  
sp|A3NEP2|Y3819_BURP6 UPF0102 protein BURPS668_3819 OS=Burkholde...    31   3.3  
sp|Q63PU8|Y3274_BURPS UPF0102 protein BPSL3274 OS=Burkholderia p...    31   3.3  
sp|Q3JY95|Y041_BURP1 UPF0102 protein BURPS1710b_0041 OS=Burkhold...    31   3.3  
sp|Q6XW15|POLG_BTMV Genome polyprotein OS=Beet mosaic virus PE=3...    31   3.3  
sp|P35963|POL_HV1Y2 Gag-Pol polyprotein OS=Human immunodeficienc...    30   5.7  
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   7.4  
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O...    30   9.7  
sp|A1W341|Y414_ACISJ UPF0102 protein Ajs_0414 OS=Acidovorax sp. ...    30   9.7  
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri...    30   9.7  
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma...    30   9.7  

>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
           OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
          Length = 221

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +1

Query: 211 SGDETDLRIEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 345
           SG+ +D+  E+ +G +AS++ E +  KR+G+ W++ +S +VP R N
Sbjct: 69  SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112


>sp|A3MR08|Y5676_BURM7 UPF0102 protein BMA10247_3176 OS=Burkholderia
           mallei (strain NCTC 10247) GN=BMA10247_3176 PE=3 SV=1
          Length = 144

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|A2S703|Y4042_BURM9 UPF0102 protein BMA10229_A1742
           OS=Burkholderia mallei (strain NCTC 10229)
           GN=BMA10229_A1742 PE=3 SV=1
          Length = 144

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|A3P0J9|Y3900_BURP0 UPF0102 protein BURPS1106A_3900
           OS=Burkholderia pseudomallei (strain 1106a)
           GN=BURPS1106A_3900 PE=3 SV=1
          Length = 144

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|Q62G58|Y2801_BURMA UPF0102 protein BMA2801 OS=Burkholderia
           mallei GN=BMA2801 PE=3 SV=2
          Length = 144

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|A1UZH3|Y1824_BURMS UPF0102 protein BMASAVP1_A0024
           OS=Burkholderia mallei (strain SAVP1) GN=BMASAVP1_A0024
           PE=3 SV=1
          Length = 144

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|Q146Q2|Y149_BURXL UPF0102 protein Bxeno_A0149 OS=Burkholderia
           xenovorans (strain LB400) GN=Bxeno_A0149 PE=3 SV=1
          Length = 140

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 217 RHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSGNARRLLFR 86
           R++  RG EID +   R G+  F+ V AR +  Y G A  + +R
Sbjct: 47  RNVACRGGEIDLVMRERDGALVFVEVRARAQRRYGGAAASIGWR 90


>sp|A4F7G0|URED1_SACEN Urease accessory protein ureD 1
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=ureD1 PE=3 SV=1
          Length = 255

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 82  ASGTKVVLHFRNKSPDPLLPPRESKKNPGGK-V*FGQSPCPSELSGDETDLRIEMRVGPV 258
           A G  VV   R++ P  L+P R      GG  V        S + GD  DLR+ +  G  
Sbjct: 13  ADGRNVVRELRSQPPITLIPRRGVASAAGGPAVVHLVGSATSPMGGDRVDLRVHVGAGAA 72

Query: 259 ASVSPEAKSIKRKG 300
             +S  A ++   G
Sbjct: 73  LRLSGTAATVALPG 86


>sp|A3NEP2|Y3819_BURP6 UPF0102 protein BURPS668_3819 OS=Burkholderia
           pseudomallei (strain 668) GN=BURPS668_3819 PE=3 SV=1
          Length = 144

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGIGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91


>sp|Q63PU8|Y3274_BURPS UPF0102 protein BPSL3274 OS=Burkholderia
           pseudomallei GN=BPSL3274 PE=3 SV=1
          Length = 144

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 274 RGTPKQQDPPASRYEDRS-----RRHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSG 110
           RG     +  A R+ +R+      R++  RG EID +   R G+  F+ V AR    Y G
Sbjct: 30  RGIGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGG 89

Query: 109 NA 104
            A
Sbjct: 90  AA 91
tr_hit_id A1CQJ5
Definition tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus
Align length 70
Score (bit) 35.4
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912055|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_E06.
         (536 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   1.9  
tr|B2JKC8|B2JKC8_BURP8 Putative uncharacterized protein OS=Burkh...    34   5.5  
tr|A2TB15|A2TB15_9HIV1 Pol protein (Fragment) OS=Human immunodef...    33   7.2  
tr|B8C9U7|B8C9U7_THAPS Putative uncharacterized protein OS=Thala...    33   7.2  

>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 35.4 bits (80), Expect = 1.9
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -3

Query: 498 GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 319
           G+RP + FA  P+  +G N  G  Y L Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 318 ----LNFPRI 301
               +  PR+
Sbjct: 227 TVYTITIPRL 236


>tr|B2JKC8|B2JKC8_BURP8 Putative uncharacterized protein
           OS=Burkholderia phymatum (strain DSM 17167 / STM815)
           GN=Bphy_0123 PE=4 SV=1
          Length = 156

 Score = 33.9 bits (76), Expect = 5.5
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 217 RHLVRRGKEIDQIKLSRPGSFCFLLVEARGRETYSGNARRLLFR 86
           R++V RG EID +   R GS  F+ V AR +  Y G A  + +R
Sbjct: 66  RNVVCRGGEIDLVMRERDGSLVFVEVRARAQSEYGGAAASVGWR 109


>tr|A2TB15|A2TB15_9HIV1 Pol protein (Fragment) OS=Human
           immunodeficiency virus 1 GN=pol PE=4 SV=1
          Length = 161

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +3

Query: 93  KSRLAFPE*VSRPLASTKRKQKEPGRESLIWSISLPLRTKWRRDRSSYRDAGGSCCFGVP 272
           +  LAFP+  +R L+S + +   P R  L           W RD +S  +AGG+     P
Sbjct: 3   RENLAFPQGEARELSSEQTRAXSPTRREL---------QVWGRDNNSLSEAGGTVSLSFP 53

Query: 273 RS*IYQK 293
           +  ++Q+
Sbjct: 54  QITLWQR 60


>tr|B8C9U7|B8C9U7_THAPS Putative uncharacterized protein
           OS=Thalassiosira pseudonana CCMP1335 GN=THAPSDRAFT_29506
           PE=4 SV=1
          Length = 105

 Score = 33.5 bits (75), Expect = 7.2
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
 Frame = +2

Query: 68  RILARRPEQKSSCISGISLPTPCFHQEKAKRTRAGKF--------DLVNLLAPPN*VATR 223
           RIL RR E++    SGI LPT     +K K    G          D+  +L  P   A  
Sbjct: 19  RILIRRAEKEVKTASGILLPT-----DKGKDPNEGVVVAVGPGLRDVSGVLHAPTVKAGD 73

Query: 224 PIFVSRCGWVLLLRCPPKLNLSKEKEILGKF 316
            + + + G   +     K++L +E++ILGKF
Sbjct: 74  TVLLPKYGGTEIEIGDEKMSLFREEDILGKF 104