BP912057 |
Clone id |
YMU001_000012_E09 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_E09. |
Accession |
BP912057 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1892Contig1 |
Sequence |
TTTTGAAGTAAAGCATGTGGTATGCACGTTTACATTGGAAACTTGTTTAGAGAAACAATA CATACATAACAACAAGAAACCCGGAGGCACATAAGTAACCTGAAAAGCTTGGCCTCTTGC TGGTCTGGAGCAGGGGGCGGGGGGGCATAGTGGCGTGCAGCACCGATGAAAACCCATCGG AAAACCAAAAGGATACCCTGTACCAAAGCCTGTGCCATCAGGGAAGCCATGCACTTGAAA ACCGAAAAGGGAAGGAAAGAGGCCAAATCCTGCAGAAAAGGTGAAATTCCCAAAGCGAGC AGCAGCCATTGGGGCACCAGCACCCATGAAGTTGAAGCCTTGTGACTGTGGGTGATGCTG GTTGAAATGTTCTGCAGGACGGGCAGGTGGGGGGCGTTGTCCAGGTGGCCTGTGTGGAAT ATCCGAGGACATTGCTGGTGGTGGCTTCCTGCGTGGATCAGAAGAGTTTGCATTGACACG CCCATAAAGAGGCACCAACTTGTCTTCTTCTACGAGGGCTTTGCAGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q09463 |
Definition |
sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis elegans |
Align length |
102 |
Score (bit) |
45.1 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMW8 |
Definition |
tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
101 |
Score (bit) |
100.0 |
E-value |
6.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912057|Adiantum capillus-veneris mRNA, clone: YMU001_000012_E09. (528 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea... 100 6e-20 tr|A9T4Q7|A9T4Q7_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18 tr|A5BLE6|A5BLE6_VITVI Putative uncharacterized protein (Chromos... 90 6e-17 tr|A5B286|A5B286_VITVI Putative uncharacterized protein (Chromos... 80 8e-14 tr|Q9LN67|Q9LN67_ARATH F18O14.3 (At1g19310/F18O14_14) (Putative ... 75 3e-12 tr|Q2QLM8|Q2QLM8_ORYSJ Os12g0636000 protein OS=Oryza sativa subs... 74 6e-12 tr|Q4LAW4|Q4LAW4_CAPCH Putative zinc finger protein OS=Capsicum ... 72 1e-11 tr|B6TLS1|B6TLS1_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 71 3e-11 tr|B6TI40|B6TI40_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 71 3e-11 tr|B4FM66|B4FM66_MAIZE Putative uncharacterized protein OS=Zea m... 71 3e-11 tr|Q84SW9|Q84SW9_ORYSJ Os03g0678400 protein OS=Oryza sativa subs... 71 4e-11 tr|B8BN68|B8BN68_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|A2XKL4|A2XKL4_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|Q5ZAN7|Q5ZAN7_ORYSJ cDNA clone:J023023M16, full insert sequen... 70 5e-11 tr|Q0JJ10|Q0JJ10_ORYSJ Os01g0766200 protein (Fragment) OS=Oryza ... 70 5e-11 tr|A2WVF2|A2WVF2_ORYSI Putative uncharacterized protein OS=Oryza... 70 5e-11 tr|B6TF06|B6TF06_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 67 4e-10 tr|B6T0C5|B6T0C5_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 67 4e-10 tr|B6SUD6|B6SUD6_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 67 6e-10 tr|B4FE79|B4FE79_MAIZE Putative uncharacterized protein OS=Zea m... 67 7e-10 tr|B6UBI0|B6UBI0_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 62 1e-08 tr|A7PV14|A7PV14_VITVI Chromosome chr4 scaffold_32, whole genome... 62 1e-08 tr|A5BWY1|A5BWY1_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08 tr|Q8LDY7|Q8LDY7_ARATH Putative RING zinc finger protein OS=Arab... 62 2e-08 tr|O64824|O64824_ARATH Putative RING zinc finger protein OS=Arab... 62 2e-08 tr|A9PIP3|A9PIP3_POPJC Putative uncharacterized protein OS=Popul... 60 5e-08 tr|Q6T4P9|Q6T4P9_PYRCO Putative RING zinc finger protein (Fragme... 50 9e-05 tr|Q54ND8|Q54ND8_DICDI Putative uncharacterized protein OS=Dicty... 47 6e-04 tr|B5X223|B5X223_SALSA RING finger protein 185 OS=Salmo salar GN... 46 0.001 tr|B5DVD7|B5DVD7_DROPS GA28677 OS=Drosophila pseudoobscura pseud... 46 0.001
>tr|A9NMW8|A9NMW8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 240
Score = 100 bits (248), Expect = 6e-20 Identities = 56/101 (55%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKALVEEDK+VPLYGR + DPR K P ++ F Q Sbjct: 83 VCKALVEEDKIVPLYGRGKVGAPDPRSKAIPGINIPHRPAGRRPETAPSPGPNLFQQ--- 139
Query: 348 QSQGFNFMGAG-APMAAARFGNFTFSAGFGLFPSLFGFQVH 229 Q F FMG G APM AARFGNFTFSAGFGLFPSLFGFQ+H Sbjct: 140 --QPFGFMGGGPAPMGAARFGNFTFSAGFGLFPSLFGFQMH 178
>tr|A9T4Q7|A9T4Q7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_140226 PE=4 SV=1 Length = 234
Score = 94.4 bits (233), Expect = 3e-18 Identities = 55/101 (54%), Positives = 61/101 (60%), Gaps = 1/101 (0%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCK VEEDK++PLYGR N DPR K P ++ I AEH Q+ P Sbjct: 79 VCKGSVEEDKVIPLYGRGKVNCVDPRTKAVPGLN--IPHRPVGQRPETARHAEH--QYPP 134
Query: 348 QSQGFNFM-GAGAPMAAARFGNFTFSAGFGLFPSLFGFQVH 229 Q GFNFM G P A ARFGN T SAGFGLFPSLFGFQ+H Sbjct: 135 Q--GFNFMAGPTGPAATARFGNITLSAGFGLFPSLFGFQLH 173
>tr|A5BLE6|A5BLE6_VITVI Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00014684001 PE=4 SV=1 Length = 232
Score = 90.1 bits (222), Expect = 6e-17 Identities = 56/104 (53%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKALVEE+KLVPLYGR S+DPR K P ++ A HF QH Sbjct: 72 VCKALVEEEKLVPLYGR-GKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQH-- 128
Query: 348 QSQGFNFM---GAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 GF FM G APMA ARFGNFT SA F GLFPSLF QVH Sbjct: 129 ---GFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVH 169
>tr|A5B286|A5B286_VITVI Putative uncharacterized protein (Chromosome chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00036434001 PE=4 SV=1 Length = 229
Score = 79.7 bits (195), Expect = 8e-14 Identities = 47/101 (46%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKALV+E+KLVPLYGR SDPR + P ++ HF P Sbjct: 70 VCKALVQEEKLVPLYGR-GKTPSDPRSRSVPGINIPNRPAGQRPEVAPRPDVNHF----P 124
Query: 348 QSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 QG+ FMG PMA+ARFGN T SA F GL PSL VH Sbjct: 125 PPQGYGFMGGFMPMASARFGNLTLSAAFGGLIPSLLNLHVH 165
>tr|Q9LN67|Q9LN67_ARATH F18O14.3 (At1g19310/F18O14_14) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g19310 PE=2 SV=1 Length = 226
Score = 74.7 bits (182), Expect = 3e-12 Identities = 46/101 (45%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKA++EED+LVPLYGR +S+DPR K P + H HH Sbjct: 62 VCKAVIEEDRLVPLYGR-GKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHHH 120
Query: 348 QSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 GF G APMA+ARFGN T SA F GL PSLF H Sbjct: 121 GFGGF-MGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFH 160
>tr|Q2QLM8|Q2QLM8_ORYSJ Os12g0636000 protein OS=Oryza sativa subsp. japonica GN=Os12g0636000 PE=2 SV=1 Length = 234
Score = 73.6 bits (179), Expect = 6e-12 Identities = 51/102 (50%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKA+VEEDKLVPLYGR + DPR K P +DI A N H P Sbjct: 64 VCKAVVEEDKLVPLYGR-GKDRVDPRSKNVPG--ADIPNRPAGQRPATAPQANP-NTHFP 119
Query: 348 QSQGFN-FMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 + FMG G P+A AR+GN+TFSA F GLFP L FQVH Sbjct: 120 NANPNPWFMGGGIPLANARWGNYTFSAAFGGLFP-LLSFQVH 160
>tr|Q4LAW4|Q4LAW4_CAPCH Putative zinc finger protein OS=Capsicum chinense GN=rzfp PE=2 SV=1 Length = 220
Score = 72.4 bits (176), Expect = 1e-11 Identities = 44/101 (43%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKAL++E+KLVPLYGR +DPR KP P + +F Sbjct: 67 VCKALIQEEKLVPLYGR-GRTFTDPRSKPIPGLEIPSRPAGQRPETAPQPEPNNF----- 120
Query: 348 QSQGFNFMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 + GF MG P A ARFGNF+ AGF GL PSL FQ H Sbjct: 121 PNLGFGHMGGFFPTATARFGNFSMFAGFGGLLPSLLSFQFH 161
>tr|B6TLS1|B6TLS1_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 Length = 243
Score = 71.2 bits (173), Expect = 3e-11 Identities = 50/107 (46%), Positives = 60/107 (56%), Gaps = 7/107 (6%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKA+VEE+KLVPLYGR + DPR K P ++DI A+ N H P Sbjct: 68 VCKAVVEEEKLVPLYGR-GKDRVDPRSKNVPG-AADIPSRPAGQRPATAPQADPNNAHFP 125
Query: 348 QSQGFN---FMGAGA---PMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 + FMG G P+A AR+GN+TFSA F GLFP L FQVH Sbjct: 126 NAANPANPWFMGGGGGGIPLANARWGNYTFSAAFGGLFP-LLSFQVH 171
>tr|B6TI40|B6TI40_MAIZE RING finger protein 5 OS=Zea mays PE=2 SV=1 Length = 247
Score = 71.2 bits (173), Expect = 3e-11 Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 2/102 (1%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKA+VEE KLVPLYGR NS+ PR + + +I +H N + P Sbjct: 88 VCKAVVEEGKLVPLYGR-GGNSTSPRARSVAGV--EIPSRPTGQRPSTAPQPDHSNHYPP 144
Query: 348 QSQGFNFMGAGAP-MAAARFGNFTFSAGF-GLFPSLFGFQVH 229 Q+ F MGAGAP +A R+GN+TFSA GLFP L FQVH Sbjct: 145 QNPWF--MGAGAPPVAGGRWGNYTFSAAIGGLFP-LLSFQVH 183
>tr|B4FM66|B4FM66_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 230
Score = 71.2 bits (173), Expect = 3e-11 Identities = 49/103 (47%), Positives = 56/103 (54%), Gaps = 3/103 (2%) Frame = -1
Query: 528 VCKALVEEDKLVPLYGRVNANSSDPRRKPPPAMSSDIXXXXXXXXXXXXXPAEHFNQHHP 349 VCKALVEEDKLVPLYGR + DPR K P +I A+ N Sbjct: 63 VCKALVEEDKLVPLYGR-GKDRVDPRSKNMP--EGEIPHRPTGQRPAPAPQADANNNFAN 119
Query: 348 QSQGFN--FMGAGAPMAAARFGNFTFSAGF-GLFPSLFGFQVH 229 + N FMG G P+A AR+GN+ FSA F GLFP L FQVH Sbjct: 120 ANPNANPWFMGTGVPLANARWGNYAFSAAFGGLFPML-SFQVH 161
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