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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912058
Clone id YMU001_000012_E10
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000012_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACTCAGGATCGATGTGTGAAGGTGGGAATGGATGGTGTTGTGCTTAAGCCAGTTTCACTG
ATGGAGATGAGCAACAAGCTCTGCTCAATACTGCGGAGGGCAAAAGTTTATTACAATGTT
CGGTGATGTTTGTACCTCAGCGAAAGTGGTTGTGTGTATGGTCAACCTGTGCAAATGCTT
TCTAGAGCACATTGATTGTTGCTTTGGCAATGCCATGGCTCAACTTCAGAATCTAAACTC
TTGGGGATGTGTGGGATACAAGGCCCACTAAGCAGTGCAACTCAGCCGAAGGGCTTCTCT
GAAGTACACCGAAATCAGCTCTTGGGACCGATGTCTGTGAAGAAGATAGTCTCTTCAGTC
ACAGTGAGGTAGTTATTTACCCTGTTGACAGCCTCAGTCATGACTCATGACATGAAATGT
TCAAAGGCCGGGGCCTGCAAAGTCAACAAAAATTCTTTATTGCCCACTGCACATAGTCAA
C
■■Homology search results ■■ -
sp_hit_id Q9XH57
Definition sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum
Align length 37
Score (bit) 42.0
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912058|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_E10.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum...    42   0.001
sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum...    40   0.004
sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum...    40   0.004
sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=E...    39   0.009
sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1...    39   0.009
sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum...    39   0.009
sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=E...    38   0.028
sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR...    38   0.028
sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR...    38   0.028
sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reti...    38   0.028
sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=E...    38   0.028
sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana G...    35   0.14 
sp|Q882Y4|GLSA_PSESM Glutaminase OS=Pseudomonas syringae pv. tom...    30   7.4  
sp|Q6AX33|MAST3_XENLA Microtubule-associated serine/threonine-pr...    29   9.6  

>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum
           GN=ETR2 PE=2 SV=1
          Length = 741

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T+D C +VGM+GVVLKPVS+ +M N L ++L    ++
Sbjct: 702 TKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEHRVLF 738


>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum
           GN=ETR2 PE=2 SV=1
          Length = 736

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 108
           T++ C++VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 700 TKENCLRVGMDGVILKPVSIDKMRSVLSGLLEHGTV 735


>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum
           GN=ETR1 PE=2 SV=1
          Length = 754

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 108
           T++ C++VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 716 TKENCMRVGMDGVILKPVSVYKMRSVLSELLEHGVV 751


>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1
           PE=2 SV=1
          Length = 738

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 108
           T++ C++VGMDGV+LKPVS+ +M + L  +L    +
Sbjct: 700 TKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVI 735


>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1
           PE=2 SV=1
          Length = 738

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 699 TKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 735


>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum
           GN=ETR1 PE=2 SV=1
          Length = 740

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSIL 93
           T++ C++VGM+GV+LKPVS+ +M N L  +L
Sbjct: 702 TKENCLRVGMEGVILKPVSVDKMRNVLSKLL 732


>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1
           PE=2 SV=1
          Length = 738

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 15/37 (40%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VGMDG +LKPVS+ +M + L  +L    ++
Sbjct: 700 TKENCMRVGMDGAILKPVSVDKMRSVLSDLLEHKVLF 736


>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1
           PE=2 SV=1
          Length = 741

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VG+DGV+LKPVS+ +M + L  +L    ++
Sbjct: 702 TKENCMRVGVDGVILKPVSVDKMRSVLSELLEHRVLF 738


>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR1
           PE=2 SV=1
          Length = 740

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 14/37 (37%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++ GMDG++LKPVS+ +M + L  ++ R  ++
Sbjct: 701 TKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLF 737


>sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var.
           reticulatus GN=ETR1 PE=2 SV=1
          Length = 740

 Score = 37.7 bits (86), Expect = 0.028
 Identities = 14/37 (37%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++ GMDG++LKPVS+ +M + L  ++ R  ++
Sbjct: 701 TKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLF 737
tr_hit_id A9ST35
Definition tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella patens subsp. patens
Align length 35
Score (bit) 47.0
E-value 0.0005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912058|Adiantum capillus-veneris mRNA, clone:
YMU001_000012_E10.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella ...    47   5e-04
tr|A9CPF1|A9CPF1_PHYPA Ethylene receptor homolog OS=Physcomitrel...    47   5e-04
tr|Q5QG25|Q5QG25_SOLLC Ethylene receptor OS=Solanum lycopersicum...    40   0.044
tr|B3FIB1|B3FIB1_ACTDE Ethylene receptor ETR3 (Fragment) OS=Acti...    40   0.044
tr|Q5I7E2|Q5I7E2_HEVBR Ethylene receptor OS=Hevea brasiliensis P...    40   0.057
tr|Q9M5L8|Q9M5L8_MANIN Ethylene receptor OS=Mangifera indica PE=...    40   0.075
tr|Q8W2M7|Q8W2M7_PETHY Ethylene receptor OS=Petunia hybrida GN=E...    40   0.075
tr|Q3C1C3|Q3C1C3_DIOKA Ethylene receptor ETR1 OS=Diospyros kaki ...    40   0.075
tr|Q8W230|Q8W230_PYRCO Putative ethylene receptor OS=Pyrus commu...    39   0.098
tr|Q8W216|Q8W216_PYRCO Putative ethylene receptor OS=Pyrus commu...    39   0.098
tr|Q8LLJ1|Q8LLJ1_PRUPE Ethylene receptor OS=Prunus persica GN=ET...    39   0.098
tr|Q60I96|Q60I96_PYRPY Ethylene receptor OS=Pyrus pyrifolia GN=P...    39   0.098
tr|B2MUK2|B2MUK2_TOBAC Ethylene receptor OS=Nicotiana tabacum PE...    39   0.098
tr|A9UAM9|A9UAM9_9ROSA Putative ethylene receptor OS=Prunus sali...    39   0.098
tr|A9S7V6|A9S7V6_PHYPA ETR3 ethylene receptor protein OS=Physcom...    39   0.098
tr|A9RB97|A9RB97_PHYPA ETR1 ethylene receptor OS=Physcomitrella ...    39   0.098
tr|A9CPG0|A9CPG0_PHYPA Ethylene receptor homolog OS=Physcomitrel...    39   0.098
tr|A9CPE9|A9CPE9_PHYPA Ethylene receptor homolog OS=Physcomitrel...    39   0.098
tr|A1INM1|A1INM1_PRUDO Ethylene receptor OS=Prunus domestica sub...    39   0.098
tr|Q8W221|Q8W221_PYRCO Putative ethylene receptor OS=Pyrus commu...    39   0.17 
tr|Q5K6M5|Q5K6M5_LACSA Putative ethylene receptor ETR3 OS=Lactuc...    39   0.17 
tr|A9T757|A9T757_PHYPA ETR7 ethylene receptor OS=Physcomitrella ...    39   0.17 
tr|A9CPF5|A9CPF5_PHYPA Ethylene receptor homolog OS=Physcomitrel...    39   0.17 
tr|A7QMR7|A7QMR7_VITVI Chromosome undetermined scaffold_127, who...    39   0.17 
tr|A5AMP3|A5AMP3_VITVI Putative uncharacterized protein OS=Vitis...    39   0.17 
tr|A1E4D6|A1E4D6_COFCA Ethylene receptor isoform 1 (Ethylene rec...    39   0.17 
tr|A1E4D5|A1E4D5_9GENT Ethylene receptor OS=Coffea pseudozangueb...    39   0.17 
tr|A1E4D4|A1E4D4_9GENT Ethylene receptor OS=Coffea liberica var....    39   0.17 
tr|A1E4D3|A1E4D3_COFCA Ethylene receptor OS=Coffea canephora GN=...    39   0.17 
tr|A9RL14|A9RL14_PHYPA ETR6 ethylene receptor protein OS=Physcom...    38   0.22 

>tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella
           patens subsp. patens GN=ETR2 PE=4 SV=1
          Length = 753

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAK 105
           T++RC+++GMD VVLKP+SL EMS  LC +L   K
Sbjct: 707 TKERCMQIGMDEVVLKPISLQEMSAVLCKLLHNPK 741


>tr|A9CPF1|A9CPF1_PHYPA Ethylene receptor homolog OS=Physcomitrella
           patens GN=ETR1 PE=2 SV=1
          Length = 777

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAK 105
           T++RC+++GMD VVLKP+SL EMS  LC +L   K
Sbjct: 731 TKERCMQIGMDEVVLKPISLQEMSAVLCKLLHNPK 765


>tr|Q5QG25|Q5QG25_SOLLC Ethylene receptor OS=Solanum lycopersicum
           GN=ETR2 PE=4 SV=1
          Length = 736

 Score = 40.4 bits (93), Expect = 0.044
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 108
           T++ C++VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 700 TKENCLRVGMDGVILKPVSIDKMRSVLSGLLEHGTV 735


>tr|B3FIB1|B3FIB1_ACTDE Ethylene receptor ETR3 (Fragment)
           OS=Actinidia deliciosa GN=ETR3 PE=2 SV=1
          Length = 268

 Score = 40.4 bits (93), Expect = 0.044
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = +1

Query: 7   DRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAK 105
           +RC+++GM+GV+ KPV L  M+N+L  +L+RAK
Sbjct: 234 ERCLQMGMNGVIRKPVLLQGMANELRRVLQRAK 266


>tr|Q5I7E2|Q5I7E2_HEVBR Ethylene receptor OS=Hevea brasiliensis PE=2
           SV=1
          Length = 744

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C+KVGMDGV+LKPVS+ +M   L  +L    ++
Sbjct: 705 TKENCMKVGMDGVILKPVSVDKMRGVLSDLLEHRVLF 741


>tr|Q9M5L8|Q9M5L8_MANIN Ethylene receptor OS=Mangifera indica PE=2
           SV=1
          Length = 739

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 16/37 (43%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C+ VGMDGV+LKP+SL +M + L  +L    ++
Sbjct: 700 TKENCMSVGMDGVILKPISLEKMRSVLLGLLEHRVLF 736


>tr|Q8W2M7|Q8W2M7_PETHY Ethylene receptor OS=Petunia hybrida
           GN=ETR1-3 PE=2 SV=1
          Length = 753

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 108
           T++ C++VGMDGV+LKPVS+ +M + L  +L    V
Sbjct: 715 TKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVV 750


>tr|Q3C1C3|Q3C1C3_DIOKA Ethylene receptor ETR1 OS=Diospyros kaki
           GN=etr1 PE=2 SV=1
          Length = 741

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VGMDGVVLKPVS+ +M   L  +L    ++
Sbjct: 702 TKENCMRVGMDGVVLKPVSVDKMRGVLSELLEHGVLF 738


>tr|Q8W230|Q8W230_PYRCO Putative ethylene receptor OS=Pyrus communis
           GN=ETR1a PE=2 SV=1
          Length = 741

 Score = 39.3 bits (90), Expect = 0.098
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 702 TKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 738


>tr|Q8W216|Q8W216_PYRCO Putative ethylene receptor OS=Pyrus communis
           GN=DETR1a PE=4 SV=1
          Length = 741

 Score = 39.3 bits (90), Expect = 0.098
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 1   TQDRCVKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 111
           T++ C++VGMDGV+LKPVS+ +M + L  +L    ++
Sbjct: 702 TKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLF 738