BP912068 |
Clone id |
YMU001_000012_F09 |
Library |
YMU01 |
Length |
514 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_F09. |
Accession |
BP912068 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2457Contig1 |
Sequence |
AAGTGGAAGAATTCGCGGCCGCAGGAATGGGATTTTTTTTTTGGGAGAGATCTTTTAACA TCTAATAAAGGCCGAAGTCAGCCAATGAGGCAAATCAAATATATATGTTGGTGTCCTCCA TCTATGGGAAAAGGACAGTTATATGGTGAATATCGATGTATGCTTAATCAAGATTCCATA AATTACAAAGGGGATACAAAAGTAGTTACAAGGTCACGCTATTACTGTGCAAAGGACCAC AACTTCTTCAAGCCTATTCGATAACCACACCGACCGTTTATTAAGCTTTTTTTGCCCATG GCCACCTCCAAGTTAACTGTTTATCAGGTTTTGTGGAAGATGAACTGTCCACGGCCTCAC CATTGTCTTGCTCTGACTCATTATTCTCTAACATCGTTCCTCGACTCTTGCTAAATCCCG GTAAATATTTCTTTGCTTGCTTTTGCCAAGTTTCATCAAATTCCTTCTTCTCCTCTTCAG TAAGATTATGCAAAGTCTCTACATAATCCTCCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P91645 |
Definition |
sp|P91645|CAC1A_DROME Voltage-dependent calcium channel type A subunit alpha-1 OS=Drosophila melanogaster |
Align length |
77 |
Score (bit) |
35.8 |
E-value |
0.099 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LR56 |
Definition |
tr|B8LR56|B8LR56_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
82 |
Score (bit) |
54.7 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912068|Adiantum capillus-veneris mRNA, clone: YMU001_000012_F09. (472 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LR56|B8LR56_PICSI Putative uncharacterized protein OS=Picea... 55 2e-06 tr|A7QYT4|A7QYT4_VITVI Chromosome undetermined scaffold_254, who... 44 0.003 tr|A7QV96|A7QV96_VITVI Chromosome chr2 scaffold_187, whole genom... 44 0.003 tr|B4FGR4|B4FGR4_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.045 tr|Q5VNV0|Q5VNV0_ORYSJ Os06g0134900 protein OS=Oryza sativa subs... 40 0.058 tr|B8B295|B8B295_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.058 tr|B6TGP4|B6TGP4_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.17 tr|Q6ZJ59|Q6ZJ59_ORYSJ Os08g0117900 protein OS=Oryza sativa subs... 38 0.29 tr|B8BAC8|B8BAC8_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.29 tr|A3BP36|A3BP36_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.29 tr|Q4H2V5|Q4H2V5_CIOIN Ci-Rhysin2/Deltex3-a protein (Fragment) O... 38 0.29 tr|A9PH36|A9PH36_POPTR Putative uncharacterized protein OS=Popul... 37 0.49 tr|Q940N4|Q940N4_ARATH AT4g22740/T12H17_130 (Putative uncharacte... 36 0.84 tr|Q8LDD6|Q8LDD6_ARATH Putative uncharacterized protein OS=Arabi... 36 0.84 tr|Q59E53|Q59E53_DROME Cacophony, isoform H OS=Drosophila melano... 36 1.1 tr|Q59E52|Q59E52_DROME Cacophony, isoform I OS=Drosophila melano... 36 1.1 tr|Q59E51|Q59E51_DROME Cacophony, isoform G OS=Drosophila melano... 36 1.1 tr|Q59E50|Q59E50_DROME Cacophony, isoform J OS=Drosophila melano... 36 1.1 tr|B4Q1G8|B4Q1G8_DROYA GE17580 OS=Drosophila yakuba GN=GE17580 P... 36 1.1 tr|B4ND12|B4ND12_DROWI GK24986 OS=Drosophila willistoni GN=GK249... 36 1.1 tr|B4M229|B4M229_DROVI GJ18738 OS=Drosophila virilis GN=GJ18738 ... 36 1.1 tr|B4L4Y1|B4L4Y1_DROMO GI14769 OS=Drosophila mojavensis GN=GI147... 36 1.1 tr|B4K3L4|B4K3L4_DROGR GH25242 OS=Drosophila grimshawi GN=GH2524... 36 1.1 tr|B4K1X2|B4K1X2_DROGR GH25285 OS=Drosophila grimshawi GN=GH2528... 36 1.1 tr|B4JIQ5|B4JIQ5_DROGR GH11826 OS=Drosophila grimshawi GN=GH1182... 36 1.1 tr|B4IL98|B4IL98_DROSE GM13236 OS=Drosophila sechellia GN=GM1323... 36 1.1 tr|B4H0Y5|B4H0Y5_DROPE GL15847 OS=Drosophila persimilis GN=GL158... 36 1.1 tr|B3NT10|B3NT10_DROER GG18816 OS=Drosophila erecta GN=GG18816 P... 36 1.1 tr|B3N1D3|B3N1D3_DROAN GF21581 OS=Drosophila ananassae GN=GF2158... 36 1.1 tr|B4K0D6|B4K0D6_DROGR GH13891 OS=Drosophila grimshawi GN=GH1389... 35 1.4
>tr|B8LR56|B8LR56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 54.7 bits (130), Expect = 2e-06 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Frame = -1
Query: 472 KEDYVETLHNLTEEEKKEFDETWQKQAKKYLPGFSKSRGTMLENNESEQDNGEAVDSSSS 293 +E+ +E LHNLTEEE +F+ETW+ A LPG S+SR MLE N S SS Sbjct: 302 RENTLEALHNLTEEEAVKFNETWETHAASSLPG-SRSRSRMLEGN----------SSGSS 350
Query: 292 TKPDKQL------TWRWPWAKK 245 ++P +L ++ WP ++ Sbjct: 351 SRPQLRLPSTEGHSYAWPGVRR 372
>tr|A7QYT4|A7QYT4_VITVI Chromosome undetermined scaffold_254, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010318001 PE=4 SV=1 Length = 276
Score = 44.3 bits (103), Expect = 0.003 Identities = 18/34 (52%), Positives = 24/34 (70%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGFSK 365 D ++ LHNL E E F+E WQ AKKYLPG+++ Sbjct: 174 DTMQALHNLNENELSGFEEAWQGNAKKYLPGWNE 207
>tr|A7QV96|A7QV96_VITVI Chromosome chr2 scaffold_187, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007251001 PE=4 SV=1 Length = 276
Score = 44.3 bits (103), Expect = 0.003 Identities = 18/34 (52%), Positives = 24/34 (70%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGFSK 365 D ++ LHNL E E F+E WQ AKKYLPG+++ Sbjct: 174 DTMQALHNLNENELSGFEEAWQGNAKKYLPGWNE 207
>tr|B4FGR4|B4FGR4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 356
Score = 40.4 bits (93), Expect = 0.045 Identities = 18/40 (45%), Positives = 29/40 (72%) Frame = -1
Query: 460 VETLHNLTEEEKKEFDETWQKQAKKYLPGFSKSRGTMLEN 341 ++TLHNL E+E F+E+WQ+ A++ +PG+ +R ML N Sbjct: 275 LQTLHNLNEDELGGFEESWQRNARQNMPGWD-TRMNMLGN 313
>tr|Q5VNV0|Q5VNV0_ORYSJ Os06g0134900 protein OS=Oryza sativa subsp. japonica GN=P0001H02.18 PE=2 SV=1 Length = 300
Score = 40.0 bits (92), Expect = 0.058 Identities = 21/69 (30%), Positives = 36/69 (52%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGFSKSRGTMLENNESEQDNGEAVDSSSSTK 287 D + LHNL E+E F+E+W+ A+ +L G +++ GT +N +E N ++ Sbjct: 215 DTTQILHNLHEDELAGFEESWKGNARHHLAGLNQNAGT---SNNNEPGN------RGTSG 265
Query: 286 PDKQLTWRW 260 +Q W W Sbjct: 266 RGRQSAWGW 274
>tr|B8B295|B8B295_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21523 PE=4 SV=1 Length = 300
Score = 40.0 bits (92), Expect = 0.058 Identities = 21/69 (30%), Positives = 36/69 (52%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGFSKSRGTMLENNESEQDNGEAVDSSSSTK 287 D + LHNL E+E F+E+W+ A+ +L G +++ GT +N +E N ++ Sbjct: 215 DTTQILHNLHEDELAGFEESWKGNARHHLAGLNQNAGT---SNNNEPGN------RGTSG 265
Query: 286 PDKQLTWRW 260 +Q W W Sbjct: 266 RGRQSAWGW 274
>tr|B6TGP4|B6TGP4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 350
Score = 38.5 bits (88), Expect = 0.17 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = -1
Query: 460 VETLHNLTEEEKKEFDETWQKQAKKYLPGFSKSRGTMLENNESEQD 323 ++TLHNL E+E F+E+WQ+ ++ +PG++ R ML + D Sbjct: 273 LQTLHNLNEDELAGFEESWQRNTRENMPGWN-PRMNMLGSGNVRSD 317
>tr|Q6ZJ59|Q6ZJ59_ORYSJ Os08g0117900 protein OS=Oryza sativa subsp. japonica GN=OJ1005_B05.2 PE=4 SV=1 Length = 328
Score = 37.7 bits (86), Expect = 0.29 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGF 371 D ++TLHNL E+E F+E+WQ+ A + L G+ Sbjct: 244 DTMQTLHNLNEDELARFEESWQRNAVQNLSGW 275
>tr|B8BAC8|B8BAC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27615 PE=4 SV=1 Length = 328
Score = 37.7 bits (86), Expect = 0.29 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGF 371 D ++TLHNL E+E F+E+WQ+ A + L G+ Sbjct: 244 DTMQTLHNLNEDELARFEESWQRNAVQNLSGW 275
>tr|A3BP36|A3BP36_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024808 PE=4 SV=1 Length = 285
Score = 37.7 bits (86), Expect = 0.29 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -1
Query: 466 DYVETLHNLTEEEKKEFDETWQKQAKKYLPGF 371 D ++TLHNL E+E F+E+WQ+ A + L G+ Sbjct: 244 DTMQTLHNLNEDELARFEESWQRNAVQNLSGW 275
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